BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1101.p (716 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA0095 [S] COG3501 Uncharacterized protein conserved in bacteria... 464 e-130 PA2685 [S] COG3501 Uncharacterized protein conserved in bacteria... 421 e-117 mll2357 Non COG 366 e-100 RSc1944_1 [S] COG3501 Uncharacterized protein conserved in bacte... 347 6e-95 RSc0958_1 [S] COG3501 Uncharacterized protein conserved in bacte... 340 5e-93 >PA0095 [S] COG3501 Uncharacterized protein conserved in bacteria Pae Pseudomonas aeruginosa Length = 741 Score = 464 bits (1193), Expect = e-130, Method: Compositional matrix adjust. Identities = 273/738 (36%), Positives = 404/738 (54%), Gaps = 60/738 (8%) Query: 17 AQRQNNRLLRLSFPRDDAPADA-LMVANRLSAYEGMSRDFQFTVEVLSDNPDIALKDVMA 75 A Q RL+R+ D+P A ++ R+ E + R F + +E++S+NPD+ L ++ Sbjct: 2 ALAQQTRLVRV-----DSPLGAEVLQLQRMEGREELGRPFAYELELISENPDLPLDGLLG 56 Query: 76 KMVTLELLRADGSVRYFNGYVFDFRFVRQDGGFSYYDLVALPWLAFLRYRHDNYLFHGKT 135 K +L L DGS R+F+G V +G F+ Y + PWL L D +F + Sbjct: 57 KPASLALELHDGSRRHFHGIVAACSQGSGNGQFASYQVTLRPWLWLLTRTSDCRIFQNQK 116 Query: 136 VQQQTTEIFNDYDMRDWQCKGLQGDAPMTDACQFDESDYNYLHRRWEALGWHYWYEHRKD 195 V ++F D D++ + Q+ E+ ++++ R E G +YW+ H + Sbjct: 117 VPDIIKQVFRDLGFSDFEDALSRSYREWEYCVQYRETSFDFVSRLMEQEGIYYWFRHEQS 176 Query: 196 GHTLMLCG--DSTQAEPIDGSGQMLWQGRSGVKDSGLHSFSSVRTVAATAYAASSFDFKS 253 H L+L + Q+ P S + + + R V + + + + +DF+ Sbjct: 177 RHILVLSDAYGAHQSPPNYASVPYYPPTLEQRERDHFYDWHMAREVQSGSLSLNDYDFQR 236 Query: 254 PRPIRADAPTINKQGVVPKLEVYEYAGAYGYKNSADGRDFVRMRIEEIEAASKHFKAKGD 313 P I + +Y+Y G Y S DG + R RIE ++A + + +G Sbjct: 237 PGARLEVRSNIARSHAAADYPLYDYPGEY--VQSQDGEQYARTRIEALQARYERVRLRGR 294 Query: 314 DDHSQCGRSFVLSGHLDARSAGNEDSQFLILEARHEVSNN-YETRQGSTAA-YDVELTCL 371 G F LSG+ +++ ++L++ A + V YET G A ++ EL C+ Sbjct: 295 ARGLGSGHLFKLSGY----PREDQNREYLVVGAEYRVVQELYETGGGGVGAQFESELDCI 350 Query: 372 RKKIPWRPGRGFNSTE-PKIYGVQTAIVVGPAGEEIYTDEYGRVKVQFHWDREGEYNEKS 430 +RP +T P + G QTA+VVGP GEEI+TD+YGRVKV FHWDR + NE S Sbjct: 351 DAGQAYRP---LPTTPLPIVRGPQTAVVVGPKGEEIWTDQYGRVKVHFHWDRHDQSNENS 407 Query: 431 SAWVRVASTWAGSNFGFMAVPRIGQEVIVQWLDGNVDRPLITGRVFNQSNMPPWPLPDNK 490 S W+RV+ WAG N+G M +PRIGQEVIV +L+G+ DRP+ITGRV+N P+ LP N Sbjct: 408 SCWIRVSQAWAGKNWGSMQIPRIGQEVIVSFLEGDPDRPIITGRVYNAEQTVPYELPANA 467 Query: 491 TQTGILSRSSHDGGYDNANALRFEDKKGQEEVWLHAEKDQRIEVEHDESHWVGNDRSKTI 550 TQ+G+ SRSS G N N +R EDKKG E++++HAEK+Q IEVE+DE+HWVG+DR+KTI Sbjct: 468 TQSGMKSRSSKGGTPANFNEIRMEDKKGAEQLFIHAEKNQDIEVENDETHWVGHDRTKTI 527 Query: 551 DHDETVHVKHDRTETVGNNETITVHNNRTEQVDQNETINIGANRTEEVGQNETISI---- 606 DHDETVHVKHDRTETV NNETIT+ +RTE+V NE I+IGANRTE+VG NETISI Sbjct: 528 DHDETVHVKHDRTETVDNNETITIGVDRTEKVGNNEKISIGANRTEDVGSNETISIGVDR 587 Query: 607 ----GANQSITIGQNKTETVTIAKALTVGAGYAVSVGGAMNTAVGLAQLEEVGLNK---- 658 G+N+ I+IG N+TE V + +++GA + SVG ++G + E VG N+ Sbjct: 588 TEKVGSNEKISIGANRTEDVGNDETISIGANRSESVGNNETISIGADRSESVGANETIDI 647 Query: 659 ----------------------------SVMVGKTFNITAGDEFKITVGKSTMVMKSDGT 690 S+ VGK+F + AGD + G +++ MK DG+ Sbjct: 648 GGNQSTSIGKNESRSVGQGRDTSVGKDDSLDVGKSFTLNAGDSITLVTGAASIRMKKDGS 707 Query: 691 VLINGTKFNFEASGPVQI 708 ++I+G + SG + + Sbjct: 708 IVISGKNITIDGSGAINV 725 >PA2685 [S] COG3501 Uncharacterized protein conserved in bacteria Pae Pseudomonas aeruginosa Length = 726 Score = 421 bits (1081), Expect = e-117, Method: Compositional matrix adjust. Identities = 258/713 (36%), Positives = 380/713 (53%), Gaps = 45/713 (6%) Query: 20 QNNRLLRLSFPRDDAPADALMVANRLSAYEGMSRDFQFTVEVLSDNPDIALKDVMAKMVT 79 Q+ RL+ + P ++ RL E + R F +E++S NP + L ++ K ++ Sbjct: 42 QHTRLVHVDSPL----GPEVLQLQRLEGREELGRLFSHELELVSSNPALPLDALLGKPMS 97 Query: 80 LELLRADGSVRYFNGYVFDFRFVRQDGGFSYYDLVALPWLAFLRYRHDNYLFHGKTVQQQ 139 L L GS RYF+G V G F+ Y + PWL L D +F + V Sbjct: 98 LALELPGGSRRYFHGIVARCSQGAGAGQFASYQVTLRPWLWLLTRTSDCRIFQNQKVPDI 157 Query: 140 TTEIFNDYDMRDWQCKGLQGDAPMTDACQFDESDYNYLHRRWEALGWHYWYEHRKDGHTL 199 ++F D D++ + Q+ E+ ++++ R E G +YW+ H K H L Sbjct: 158 IKQVFRDLGFSDFEDALSRSYREWEYCVQYRETSFDFVSRLMEQEGIYYWFRHEKKRHIL 217 Query: 200 MLCGDSTQAEPIDGSGQMLWQGRSGVKDSGLHSFS--SVRTVAATAYAASSFDFKSPRPI 257 +L G + + S H F R V + + + +DF+ P Sbjct: 218 VLSDAYGAHHSPAGYTSVPYYPPSLGHRERDHFFDWHMAREVQPGSLSLNDYDFQRPGTR 277 Query: 258 RADAPTINKQGVVPKLEVYEYAGAYGYKNSADGRDFVRMRIEEIEAASKHFKAKGDDDHS 317 + + +Y+Y G Y S DG + R RIE I+ + + +G Sbjct: 278 LEVRSNVGRAHAAADYPLYDYPGEY--VQSQDGEHYARTRIEAIQTQYERVRLRGCARGI 335 Query: 318 QCGRSFVLSGHLDARSAGNEDSQFLILEARHEVSNN-YETRQGSTAA-YDVELTCLRKKI 375 G F HL +++ ++L++ A + V YET G A ++ EL C+ Sbjct: 336 GAGHLF----HLSNYPRLDQNREYLVVGAEYRVVQELYETGNGGGGAQFESELDCIDAGQ 391 Query: 376 PWRPGRGFNSTE-PKIYGVQTAIVVGPAGEEIYTDEYGRVKVQFHWDREGEYNEKSSAWV 434 +RP ST P + G QTA+VVGP GEEI+TD+YGRVKV FHWDR + NE SS W+ Sbjct: 392 AFRP---LPSTPVPVVRGPQTAVVVGPKGEEIWTDQYGRVKVHFHWDRHDQSNENSSCWM 448 Query: 435 RVASTWAGSNFGFMAVPRIGQEVIVQWLDGNVDRPLITGRVFNQSNMPPWPLPDNKTQTG 494 RV+ WAG N+G + +PRIGQEVIV +L+G+ DRP+ITGRV+N P+ LP N TQ+G Sbjct: 449 RVSQAWAGKNWGSIQIPRIGQEVIVSFLEGDPDRPIITGRVYNAEQTVPYELPANATQSG 508 Query: 495 ILSRSSHDGGYDNANALRFEDKKGQEEVWLHAEKDQRIEVEHDESHWVGNDRSKTIDHDE 554 SRSS G N N +R EDKKG E++++HAE++Q IEVE+DESHWVG+DR+KTIDHDE Sbjct: 509 TKSRSSKGGTPANFNEIRMEDKKGAEQLFIHAERNQDIEVENDESHWVGHDRTKTIDHDE 568 Query: 555 TVHVKHDRTETVGNNETITVHNNRTEQVDQNETINIGANRTEEVGQNETISIGANQSITI 614 TVHVKHDRTETV NNETITVH NR++ VD+NET+ IG N+T ETI + + Q++ + Sbjct: 569 TVHVKHDRTETVDNNETITVHANRSKTVDRNETVRIGMNKT------ETILMASLQNVGM 622 Query: 615 GQNKTETVTIAKALTVGAGYAVSVGGAMNTAVGLAQLEEVGLNKSVMVGKTFNITAG--- 671 G+ + VG GY+++VG MNT VGL Q +V K++ VG ++ ++ G Sbjct: 623 GRME----------NVGLGYSLNVGMMMNTVVGLNQSTQVMKKKTLSVGDSYEVSVGGSD 672 Query: 672 -------DEFKITVGKSTMVMKSDGTVLINGTKFNFEAS-GPVQISGKDVDVN 716 D IT+G + + +D +L+ + + G ++I +VD+N Sbjct: 673 DGSKITLDGQSITLGSQRIELTADREILLRCGQSTIRLTPGEIEILSPNVDIN 725 >mll2357 Non COG Length = 775 Score = 366 bits (939), Expect = e-100, Method: Compositional matrix adjust. Identities = 235/665 (35%), Positives = 368/665 (55%), Gaps = 28/665 (4%) Query: 36 ADALMVANRLSAYEGMSRDFQFTVEVLSDNPDIALKDVMAKMVTLELLRADGSVRYFNGY 95 AD L + L + +SR F +TV +S + D+ ++ +V++E R+F+G Sbjct: 15 ADVLTFTH-LVGRDEISRSFAYTVGFVSKSRDVDPLKMLGGVVSVE--GESDPKRWFSGL 71 Query: 96 VFDFRFVRQDGGFSYYDLVALPWLAFLRYRHDNYLFHGKTVQQQTTEIFNDYDMRDWQCK 155 V DF+ R + +YY+ PWL FL D +F T + +IF+ Y + ++ K Sbjct: 72 VSDFKLTRIEDRLAYYEATVRPWLWFLGNTTDCRIFQNMTAVEIVEKIFSKYGIAKFE-K 130 Query: 156 GLQGDAPMTDAC-QFDESDYNYLHRRWEALGWHYWYEHRKDGHTLMLCGDSTQAEPIDGS 214 LQG P + C Q+DESD +++ R +E G Y++EH +D HTL+LC ++ +P G Sbjct: 131 RLQGSYPSREYCVQYDESDLDFVQRLFEHEGIFYFFEHDEDKHTLVLCDAMSKLKPAPGY 190 Query: 215 GQMLW--QGRSGVKD-SGLHSFSSVRTVAATAYAASSFDFKSPRPIRADAPTINKQGVVP 271 ++L+ +G +D + + V AYA + +DF+ P AD + Q Sbjct: 191 EKVLYNFEGYGSRRDVEYITEWIPGSAVRPGAYAHTDYDFEKPG---ADLMAKSAQSFSH 247 Query: 272 KL---EVYEYAGAYGYKNSADGRDFVRMRIEEIEAASKHFKAKGDDDHSQCGRSFVLSGH 328 K E Y GA+ + G +R EE++A + A G G F L Sbjct: 248 KEASGENYRQPGAH--LDVGRGDTIAGIRREELQAVHQRNTAVGTVRGLFSGCKFTL--- 302 Query: 329 LDARSAGNEDSQFLILEARHEVSN-NYETR-QGSTAAYDVELTCLRKKIPWRPGRGFNST 386 ++ ++++++L++ A + + + Y T+ + + + V L K+P+RP R + Sbjct: 303 -ESFPRDDQNAEYLVVSAEYRLFDPGYRTQNEAHSENFKVVLGVAPTKLPYRPPR--ITP 359 Query: 387 EPKIYGVQTAIVVGPAGEEIYTDEYGRVKVQFHWDREGEYNEKSSAWVRVASTWAGSNFG 446 P + G QTA VVGP+GEEI+TD+Y RVKVQFHWDR G+ ++ SS +VRV+ TWAGS +G Sbjct: 360 RPIMRGPQTATVVGPSGEEIFTDKYARVKVQFHWDRLGKKDQNSSCFVRVSQTWAGSGWG 419 Query: 447 FMAVPRIGQEVIVQWLDGNVDRPLITGRVFNQSNMPPWPLPDNKTQTGILSRSSHDGGYD 506 F+ +PRIGQEVIV +++G+ D P+ITGRV+N S MPP+ LP N TQ+G S SS GG Sbjct: 420 FIQIPRIGQEVIVDFIEGDPDLPIITGRVYNASEMPPYALPGNATQSGWKSNSSKGGG-- 477 Query: 507 NANALRFEDKKGQEEVWLHAEKDQRIEVEHDESHWVGNDRSKTIDHDETVHVKHDRTETV 566 N L FEDK G E V A+KD + ++HD + V +D+S IDHD V H+ E V Sbjct: 478 GYNELMFEDKAGSELVNFQAQKDHHLLIKHDRNKTVQHDQSDRIDHDAKHSVGHNLDEDV 537 Query: 567 GNNETITVHNNRTEQVDQNETINIGANRTEEVGQNETISIGANQSITIGQNKTETVTIAK 626 GNN+T+ + ++T + N+T +GANR+ V NETI + AN + I + ++TV + + Sbjct: 538 GNNKTVKIGVDQTTNIGSNDTETVGANRSLTVMANETIHVVANSTENIDASHSQTVGLVQ 597 Query: 627 ALTVGAGYAVSVGGAMNTAVGLAQLEEVGLNKSVMV--GKTFNITAGDEFKITVGKSTMV 684 +TVGA +VG +VG AQ+ +G ++SV V G++ +I A D + + +S + Sbjct: 598 TVTVGAARVDTVGATETRSVGAAQMNTIGASRSVTVGAGQSHDIGADDGWNVEASQSIEI 657 Query: 685 MKSDG 689 G Sbjct: 658 GADQG 662 >RSc1944_1 [S] COG3501 Uncharacterized protein conserved in bacteria Rso Ralstonia solanacearum Length = 549 Score = 347 bits (890), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 215/539 (39%), Positives = 306/539 (56%), Gaps = 42/539 (7%) Query: 24 LLRLSFPRDDAPA---------DALMVANRLSAYEGMSRDFQFTVEVLSDNPDIALKDVM 74 +L LSFP+DDAP MV RL A EG+ +DF+F + +L+D+ + L D++ Sbjct: 1 MLGLSFPKDDAPTATDPRGRSFPVQMVVERLEAQEGLGQDFRFELTLLADHAGLVLADML 60 Query: 75 AKMVTLELLRADGSVRYFNGYVFDFRFVRQDGGFSYYDLVALPWLAFLRYRHDNYLFHGK 134 K++ + L++ DG++R+F G+V +F V D G + Y V PWL F R R +N +F + Sbjct: 61 GKLLAVSLVKPDGTLRWFTGHVAEFSLVGSDPGVATYRAVLRPWLWFARQRVNNRVFRDR 120 Query: 135 TVQQQTTEIFN---DYDMRDWQCKGLQGDAPMTDACQF---DESDYNYLHRRWEALGWHY 188 T+ QQ +I D+ + W G D P T A Q ES++NY+HRR EA GW Y Sbjct: 121 TLYQQIADILQGHGDWALWQWDVSG--DDVPFTMAVQGGGEGESEHNYIHRRLEARGWTY 178 Query: 189 WYEHRKDGHTLMLCGDSTQAEPIDGS-GQMLWQGRSGVK-DSGLHSFSSVRTVAATAYAA 246 +Y+H GH L++ ++Q P+DG+ ++ +Q G + ++ + ++ V+T A +AA Sbjct: 179 YYKHDATGHQLVIIDSNSQCPPVDGNDPRIPFQAEGGPQEENAIQRWTPVQTAVAALFAA 238 Query: 247 SSFDFKSPRPIRADAPTINKQGVVPKLEVYEYAGAYGY-KNSADGRDFVRMRIEEIEAAS 305 S+FDFK P+ T KQG VP+LE +EY G YG+ K G + +R EEIEA + Sbjct: 239 SAFDFKRPQARHHTESTQRKQGRVPELETHEYVGHYGFRKEDPTGAALLNLRREEIEAHA 298 Query: 306 KHFKAKGDDDHSQCGRSFVLSGHLDARSAGNEDSQFLILEARHEVSNNYET---RQGSTA 362 + ++A+G++ CG F L GH + + EDSQ+LI+ A H SNNY RQG Sbjct: 299 QQYQAEGNNSSVVCGGWFYLFGHF-SNTEREEDSQYLIVAASHSASNNYPAELGRQGGHT 357 Query: 363 A---------YDVELTCLRKKIPWRPGRGFNSTEPKIYGVQTAIVVGPAG-EEIYTDEYG 412 A Y T +++ +PWRPGRG NS E K+ G QTA VVG G + DE+G Sbjct: 358 AEPLPGRKGEYRNRFTAIKRAVPWRPGRGRNSVEVKVDGHQTARVVGRDGLGAVDVDEHG 417 Query: 413 RVKVQFHWDREGEYNEKSSAWVRVASTWAGSNFGFMAVPRIGQEVIVQWLDGNVDRPLIT 472 R+ +QFHWDREG K SA VRVAS WAG G ++ PR+G EV+V LDGN D L+ Sbjct: 418 RILIQFHWDREG----KHSARVRVASNWAGGETGMVSWPRVGSEVLVVALDGNPDHFLVI 473 Query: 473 GRVFNQSNMPPWPLPDNKTQTGILSRS-SHDGGYD---NANALRFEDKKGQEEVWLHAE 527 G V N MPPW LP GI SR + DGG D +N L +D G+ + L ++ Sbjct: 474 GVVHNAQRMPPWQLPTQGVLMGIRSRELTPDGGNDPGGRSNLLALDDTAGRIQAQLKSD 532 >RSc0958_1 [S] COG3501 Uncharacterized protein conserved in bacteria Rso Ralstonia solanacearum Length = 591 Score = 340 bits (873), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 210/541 (38%), Positives = 305/541 (56%), Gaps = 37/541 (6%) Query: 19 RQNNRLLRLSFPRDDAPA---------DALMVANRLSAYEGMSRDFQFTVEVLSDNPDIA 69 +Q+NRLL LSFP+DD P MV RL A EG+ DF+F + +L+D+ + Sbjct: 39 QQSNRLLGLSFPKDDTPTATDPRGRSFPVQMVVERLEAQEGLGEDFRFELTLLADHAGLV 98 Query: 70 LKDVMAKMVTLELLRADGSVRYFNGYVFDFRFVRQDGGFSYYDLVALPWLAFLRYRHDNY 129 L D++ K++ + L++ DG++R+F G+V +F V D G + Y V PWL F +R +N Sbjct: 99 LADMLGKLLAVSLVKPDGTLRWFTGHVSEFSLVGSDPGVATYRAVLRPWLWFALHRINNR 158 Query: 130 LFHGKTVQQQTTEIFNDYDM-RDWQCKGLQGDAPMTDACQF---DESDYNYLHRRWEALG 185 +F +++ +Q EI DY W+ DAP T A Q ESD+NY+HRR EA G Sbjct: 159 VFRDRSLYEQIAEILQDYGAWAQWRWDASGADAPFTMAVQGGGQGESDHNYIHRRLEAQG 218 Query: 186 WHYWYEHRKDGHTLMLCGDSTQAEPIDGSGQMLWQGRSGVK-DSGLHSFSSVRTVAATAY 244 W Y YEH GH L++ ++Q + G ++ +Q G + ++ + ++ V+T AA + Sbjct: 219 WTYRYEHDATGHRLVIFDSNSQCPRVAGDHRIPFQAAGGPQEENAIQRWTPVQTAAAALF 278 Query: 245 AASSFDFKSPRPIRADAPTINKQGVVPKLEVYEYAGAYGY-KNSADGRDFVRMRIEEIEA 303 AAS+FDFK + T+ KQG VP+LE +EY G YG+ K G + +R EE+EA Sbjct: 279 AASAFDFKQSQARHQAESTLRKQGRVPELEAHEYVGHYGFTKEDPTGAALLNLRREEVEA 338 Query: 304 ASKHFKAKGDDDHSQCGRSFVLSGHLDARSAGNEDSQFLILEARHEVSNNYET---RQGS 360 ++ ++A+G++ G F LS H + + EDSQ+LI+ A H SNNY RQG Sbjct: 339 HAEQYQAEGNNSSVAAGCWFELSEHF-SNTEREEDSQYLIVAASHSASNNYLAELGRQGG 397 Query: 361 TAA---------YDVELTCLRKKIPWRPGRGFNSTEPKIYGVQTAIVVGPAG-EEIYTDE 410 A Y T +++ +PWRPGRG NS + ++YG QTA V+ G + DE Sbjct: 398 REAQPLAGRKGEYRNRFTAIKRAVPWRPGRGRNSVDVRVYGQQTATVLAAGGLGALDVDE 457 Query: 411 YGRVKVQFHWDREGEYNEKSSAWVRVASTWAGSNFGFMAVPRIGQEVIVQWLDGNVDRPL 470 +GR+ ++FHWDREG++ SA VRVAS WAG G ++ PR G EV+V LDGN D L Sbjct: 458 HGRILIRFHWDREGKF----SARVRVASNWAGGETGMVSWPRAGSEVLVVALDGNPDHFL 513 Query: 471 ITGRVFNQSNMPPWPLPDNKTQTGILSRS-SHDGGYD---NANALRFEDKKGQEEVWLHA 526 + G V N MPPW LP GI SR + DGG D +N L +D G+ + L + Sbjct: 514 VIGVVHNARRMPPWQLPAQGALMGIRSRELTPDGGNDPGGRSNQLVLDDTAGKIQAQLKS 573 Query: 527 E 527 + Sbjct: 574 D 574