BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1081.p (278 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BMEII1096 [GEPR] COG0477 Permeases of the major facilitator supe... 214 1e-55 YPO2237 [GEPR] COG0477 Permeases of the major facilitator superf... 210 2e-54 RSc2352 [GEPR] COG0477 Permeases of the major facilitator superf... 210 3e-54 RSp1572 [GEPR] COG0477 Permeases of the major facilitator superf... 177 3e-44 RSp0182 [GEPR] COG0477 Permeases of the major facilitator superf... 172 9e-43 >BMEII1096 [GEPR] COG0477 Permeases of the major facilitator superfamily Bme Brucella melitensis Length = 451 Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 117/275 (42%), Positives = 175/275 (63%), Gaps = 1/275 (0%) Query: 5 PVSSVIGSPLSGLLMEHMNGFHAMHGWQWLFLVEGVPAVGLGILCLFMLKDKVADAKWLS 64 P + + G+PLSG +M+ + GWQW+F++E +PAV LG++ L L + V AKWL+ Sbjct: 177 PAAGIFGNPLSGWIMDQFHDTAGWQGWQWMFVLEAIPAVVLGVVILLYLDNSVKAAKWLT 236 Query: 65 SEEKATIKAQLAQDDS-KKATHSFSAALASGRLWHLAFLYFCIALGNLGVTFWLPSLLRD 123 EEKA I + D K A+HS + + + LW + +YFC +G G+T W+P+L+R Sbjct: 237 EEEKAIISRDIEADSKGKAASHSLMSLVKNPMLWVMMLIYFCFVMGQHGLTLWMPTLIRA 296 Query: 124 AGVQSTSTIGWLAAIPFLFSAIVMVLVGRSADARAERRYHLAIPMVVGALGLVLASWMPN 183 +GV S TIG L AIPF+ + I MV+ RSAD ERR+HL +P ++GA+G V+A+ N Sbjct: 297 SGVTSNVTIGLLGAIPFICAIIAMVIFSRSADHYRERRWHLVVPALLGAVGFVVAASATN 356 Query: 184 LPLLILMLTIATAGLTTALPMFWPLPSAILGGSAMAGGLAVLNSAGALAGFVGPSAIGYI 243 + I+ L++A AG+ P+FW LP+AIL G+A A G+A++NS LAGF+ P +G I Sbjct: 357 TTVSIIFLSMAAAGVLACAPLFWSLPTAILSGAAAAAGIALINSVANLAGFISPYMVGII 416 Query: 244 RMNFAVPSLPLWLMAGIVLIGALTVASIPKSQVNR 278 R L ++++AG +++GA V IP S+VNR Sbjct: 417 RDATHSSELGMYVLAGFLILGAAIVLCIPASKVNR 451 >YPO2237 [GEPR] COG0477 Permeases of the major facilitator superfamily Ype Yersinia pestis Length = 436 Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 112/279 (40%), Positives = 180/279 (64%), Gaps = 1/279 (0%) Query: 1 MVAVPVSSVIGSPLSGLLMEHMNGFHAMHGWQWLFLVEGVPAVGLGILCLFMLKDKVADA 60 +++VP+S +IG+PLSG +M++ NGF GWQW+F++EG+P+V +GIL ++ LKD++ A Sbjct: 158 VISVPLSGIIGAPLSGWIMQYFNGFQGYAGWQWMFILEGIPSVLVGILIIYKLKDRITHA 217 Query: 61 KWLSSEEKATIKAQLAQDDSKKATHSFSAALASGRLWHLAFLYFCIALGNLGVTFWLPSL 120 WL+ +EK ++ + + + A A R+W L +YFC+ G + FWLP+L Sbjct: 218 TWLTDKEKDILQTNIENEAAHYAHSRLRDAFLQPRVWLLTLIYFCLISGFYTIGFWLPTL 277 Query: 121 LRDAGVQSTSTIGWLAAIPFLFSAIVMVLVGRSADARAERRYHLAIPMVVGALGLVLASW 180 +RD+GV+ +IG+L AIP +A+ M++V RSAD ERR+HLA+ V+GA+G++L+++ Sbjct: 278 IRDSGVKDILSIGFLTAIPSAAAAVTMIVVSRSADRLRERRWHLALTAVLGAVGIILSTY 337 Query: 181 M-PNLPLLILMLTIATAGLTTALPMFWPLPSAILGGSAMAGGLAVLNSAGALAGFVGPSA 239 N+ + ++ LTI G + +P+FW LP+A LGGSA A G+A +NS G L GFV P Sbjct: 338 FSDNIVVAMVCLTIGAMGALSTIPLFWSLPTAFLGGSAAAAGIAFINSWGNLGGFVAPYM 397 Query: 240 IGYIRMNFAVPSLPLWLMAGIVLIGALTVASIPKSQVNR 278 +GY++ + + +++ + IGA V IP VN Sbjct: 398 MGYLKDLTQSTTTGMLIISTTLFIGAALVFLIPAKAVNH 436 >RSc2352 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso Ralstonia solanacearum Length = 442 Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 117/279 (41%), Positives = 182/279 (65%), Gaps = 1/279 (0%) Query: 1 MVAVPVSSVIGSPLSGLLMEHMNGFHAMHGWQWLFLVEGVPAVGLGILCLFMLKDKVADA 60 M AV +S VIG P+SG ++ G + + GWQW+FL+EG+P+V +G+ L L ++++ A Sbjct: 164 MTAVALSGVIGGPISGWALKTFGGVYGLAGWQWMFLIEGIPSVVIGLCVLAYLDNRISHA 223 Query: 61 KWLSSEEKATIKAQLAQDDSKKATHSFSAALASGRLWHLAFLYFCIALGNLGVTFWLPSL 120 +WL+ EEKA + +A ++++K +A +AS R+W ++ +YF +G GV+FWLP+L Sbjct: 224 RWLTDEEKALLTRNIAAEEAQKEDAPIAAIMASPRVWLMSLIYFSFVMGLYGVSFWLPTL 283 Query: 121 LRDAGVQSTSTIGWLAAIPFLFSAIVMVLVGRSADARAERRYHLAIPMVVGALGLVL-AS 179 ++ GV ++G L AIP+ + + MVLV RSAD ERR+H+AIP + GA+GLVL A Sbjct: 284 IKQTGVADPLSVGLLTAIPYGAAVVAMVLVARSADRTRERRWHIAIPALAGAIGLVLSAV 343 Query: 180 WMPNLPLLILMLTIATAGLTTALPMFWPLPSAILGGSAMAGGLAVLNSAGALAGFVGPSA 239 W N L + LT+ T G+ T LP+FW LP+A L G+ A G+A++NS G LAGF+ P A Sbjct: 344 WHTNTTLAMAALTLGTMGILTTLPLFWSLPTAFLAGTGAAAGIALINSLGNLAGFLSPYA 403 Query: 240 IGYIRMNFAVPSLPLWLMAGIVLIGALTVASIPKSQVNR 278 +G+++ ++L+A +++GAL S+P VNR Sbjct: 404 VGWLKDTTRSTDSGMYLLAASMVLGALLTLSVPARTVNR 442 >RSp1572 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso Ralstonia solanacearum Length = 433 Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 98/242 (40%), Positives = 142/242 (58%), Gaps = 1/242 (0%) Query: 3 AVPVSSVIGSPLSGLLMEHMNGFHAMHGWQWLFLVEGVPAVGLGILCLFMLKDKVADAKW 62 A P+ VIG P S +M H G + GWQW+FL EG+P++ LGI L DK ADA+W Sbjct: 158 AAPLGGVIGGPASTWIMGHFAGAGGLAGWQWMFLAEGIPSILLGIAAYGYLVDKPADARW 217 Query: 63 LSSEEKATIKAQLAQDDSKKATHSFSAALASGRLWHLAFLYFCIALGNLGVTFWLPSLLR 122 L+ +KA I +A+ +A+ SF AL +L+ LA YFC+ G V FWLPS+L+ Sbjct: 218 LTDAQKAVIAGDIARAAPGQAS-SFGKALTEPKLYVLAAAYFCLICGVYAVGFWLPSILK 276 Query: 123 DAGVQSTSTIGWLAAIPFLFSAIVMVLVGRSADARAERRYHLAIPMVVGALGLVLASWMP 182 AG+ IG +AIP L + M +GR +D R ER H AI V+GA L A++ Sbjct: 277 SAGLSDLFQIGLYSAIPNLAMIVAMYALGRRSDRRGERHLHSAITAVLGAGLLAWAAYAT 336 Query: 183 NLPLLILMLTIATAGLTTALPMFWPLPSAILGGSAMAGGLAVLNSAGALAGFVGPSAIGY 242 + P ++ +T+A+A + + +FW +P L G+A AGG+A++NS G GF P+ IG+ Sbjct: 337 SFPAALISITLASAAIFASYSVFWAIPQQHLKGTAAAGGIALINSIGLFGGFFSPTLIGW 396 Query: 243 IR 244 + Sbjct: 397 TK 398 >RSp0182 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso Ralstonia solanacearum Length = 453 Score = 172 bits (435), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 96/246 (39%), Positives = 149/246 (60%), Gaps = 5/246 (2%) Query: 3 AVPVSSVIGSPLSGLLMEHMNGFHAMHGWQWLFLVEGVPAVGLGILCLFMLKDKVADAKW 62 A+PVS V+G+PLS +M+H++ GW+W+ L+EG PAV G+LC L D+ DA+W Sbjct: 168 AIPVSYVVGAPLSTWIMDHVHWLQ-WSGWRWMLLLEGAPAVIGGLLCYGYLADRPKDARW 226 Query: 63 LSSEEKATIKAQLAQDDSKKATHSFSAAL---ASGRLWHLAFLYFCIALGNLGVTFWLPS 119 LS E+ + A+L +D + + A L R+ +LAF+YF G+LG+ +W+P Sbjct: 227 LSEAERDWLLAELERDRKARPAAAHLATLKVMTHPRVLYLAFIYFVYQCGSLGIGYWMPQ 286 Query: 120 LLRD-AGVQSTSTIGWLAAIPFLFSAIVMVLVGRSADARAERRYHLAIPMVVGALGLVLA 178 +++ + S + +G +A +P++F+ VM+ R +D RAERR H A+P+ V AL V A Sbjct: 287 IIKGFSSALSHTEVGLIAMLPYVFATAVMIWWSRRSDLRAERRLHSAVPLGVAALAFVGA 346 Query: 179 SWMPNLPLLILMLTIATAGLTTALPMFWPLPSAILGGSAMAGGLAVLNSAGALAGFVGPS 238 ++ + + + ML+++ AGL FW LP+ L S A +AV+NS G L GFVGP Sbjct: 347 GFIGHPAVAMAMLSLSLAGLYAFKSPFWALPTLFLTRSTAAVSIAVINSVGNLGGFVGPF 406 Query: 239 AIGYIR 244 AIGY + Sbjct: 407 AIGYFK 412