BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1023.p (251 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0737 [S] COG1729 Uncharacterized protein conserved in bacteri... 223 3e-58 XF1895 [S] COG1729 Uncharacterized protein conserved in bacteria... 107 3e-23 PA0974 [S] COG1729 Uncharacterized protein conserved in bacteria... 79 7e-15 ZybgF [S] COG1729 Uncharacterized protein conserved in bacteria ... 77 4e-14 ECs0777 [S] COG1729 Uncharacterized protein conserved in bacteri... 77 4e-14 >RSc0737 [S] COG1729 Uncharacterized protein conserved in bacteria Rso Ralstonia solanacearum Length = 274 Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 114/248 (45%), Positives = 163/248 (65%), Gaps = 3/248 (1%) Query: 7 LKSVTVAAMLAATAF-LPLTARAGLFDDDEARKAILDIRSKIEALQRDVGNKADKNSVLT 65 +++ A ++A A + A AG+FDDDEAR+AI+D+R K Q + D+NS Sbjct: 27 FQAILTATLVAGGALTMAGPAAAGVFDDDEARRAIIDMRDKFNNFQSSAAQRIDQNSRNQ 86 Query: 66 LSDRN--DNLQSQIAALRGQIEVLTNEITNAQQRQKDFYVDLDARLRKLEPQQVQVDGQT 123 + +N + L+S++A LRGQ E L NE+ ++QKD+Y DLDARL+K EPQQ VDG+ Sbjct: 87 IDAQNQIETLKSEVARLRGQNEQLQNEVDTLARQQKDYYADLDARLKKFEPQQATVDGRE 146 Query: 124 VAVGVSEQQAYDAALSQFKGGDYKGAANAFADFLKRYPQSGYAPSAQYWQGNSLYAQRDY 183 V E+ YDAAL F+ GD+KGA N F+ F+K+YPQS Y P AQ+W GN+LYAQRDY Sbjct: 147 GMVQPGEKTEYDAALKTFQSGDFKGAGNQFSAFVKKYPQSPYLPLAQFWLGNALYAQRDY 206 Query: 184 KGAIAAQQVVVKNYPDNPKAADALLNIASSQAELKDKAGAKKTLEQLIAKYPNTPAAQTG 243 KG+ + + + P +PKA +ALL +A++Q E KA A+KTLE +IA+YP T A+T Sbjct: 207 KGSTYVLENMARANPQHPKAPEALLQVATNQGESGQKAAARKTLETVIAEYPGTEQAKTA 266 Query: 244 KERMASLK 251 R+ +++ Sbjct: 267 TSRLKTMR 274 >XF1895 [S] COG1729 Uncharacterized protein conserved in bacteria Xfa Xylella fastidiosa 9a5c Length = 271 Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 71/226 (31%), Positives = 113/226 (50%), Gaps = 32/226 (14%) Query: 58 ADKNSVLTLSDRNDNLQSQIAALRGQIEVLTNEITNAQQRQKDFYVDLDARLRKLE---- 113 +D + L ++ ++L+SQI ++G IE + + +Q+ KD Y+DLD+RL+ +E Sbjct: 40 SDPQVNIDLINQINDLRSQIRQMQGSIEEMQHGYEQLKQQSKDQYLDLDSRLKPIESGSV 99 Query: 114 --PQQV------------------------QVDGQTVAVGVS--EQQAYDAALSQFKGGD 145 P +V + G A+ +S E+ AY+ A K Sbjct: 100 KEPSRVLANPISQVSPSHFNQPIAMSEQSPNIHGDASALTISNEERIAYNVAFDALKNSK 159 Query: 146 YKGAANAFADFLKRYPQSGYAPSAQYWQGNSLYAQRDYKGAIAAQQVVVKNYPDNPKAAD 205 Y AA F FL+ YP Y P+A YW G S YA D+ A A + ++ YP + KA+ Sbjct: 160 YADAAELFLSFLQLYPNGVYTPNALYWLGESYYAMHDFVSAEAQFRSLLSRYPTHDKASG 219 Query: 206 ALLNIASSQAELKDKAGAKKTLEQLIAKYPNTPAAQTGKERMASLK 251 +LL A QA A+ +LEQ++++YP T AA+ +ER+ S+K Sbjct: 220 SLLKEALCQANQGKNDDAQHSLEQVLSQYPGTDAARLAQERLQSIK 265 >PA0974 [S] COG1729 Uncharacterized protein conserved in bacteria Pae Pseudomonas aeruginosa Length = 274 Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 46/122 (37%), Positives = 70/122 (57%) Query: 130 EQQAYDAALSQFKGGDYKGAANAFADFLKRYPQSGYAPSAQYWQGNSLYAQRDYKGAIAA 189 E+ YDAA K D+ A+ AF FL++YP S Y+ +AQYW G A+ D +GA A Sbjct: 153 EKLYYDAAFDLIKSKDFDKASQAFNAFLRKYPNSQYSGNAQYWLGEVNLAKGDLQGAGQA 212 Query: 190 QQVVVKNYPDNPKAADALLNIASSQAELKDKAGAKKTLEQLIAKYPNTPAAQTGKERMAS 249 V ++YP + K D+L +A + L + AK L+Q+I++YP T AAQ + + + Sbjct: 213 FARVSQSYPSSQKVPDSLYKLADVERRLGNNDKAKGILQQVISQYPGTSAAQLAQRDLKN 272 Query: 250 LK 251 L+ Sbjct: 273 LR 274 >ZybgF [S] COG1729 Uncharacterized protein conserved in bacteria EcZ Escherichia coli O157:H7 EDL933 Length = 263 Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 61/198 (30%), Positives = 89/198 (44%), Gaps = 22/198 (11%) Query: 74 QSQIAALRGQIEVLTNEITNAQQRQKDFYVDLDARLRKLEPQQVQVDGQTVAVGVSEQQA 133 QS I +LRGQI+ ++ +RQK + +D+ Q Q+ A + A Sbjct: 67 QSDIDSLRGQIQENQYQLNQVVERQKQILLQIDSLSSGGAAAQSTSGDQSGAAASTTPTA 126 Query: 134 YDAALSQ----FKGGDYKGAANA-----------------FADFLKRYPQSGYAPSAQYW 172 DA + K GD NA F +F+K YP S Y P+A YW Sbjct: 127 -DAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYW 185 Query: 173 QGNSLYAQRDYKGAIAAQQVVVKNYPDNPKAADALLNIASSQAELKDKAGAKKTLEQLIA 232 G Y + A VVKNYP +PKAADA+ + + D A AK +Q+I+ Sbjct: 186 LGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVIS 245 Query: 233 KYPNTPAAQTGKERMASL 250 KYP T A+ ++R+ ++ Sbjct: 246 KYPGTDGAKQAQKRLNAM 263 >ECs0777 [S] COG1729 Uncharacterized protein conserved in bacteria Ecs Escherichia coli O157:H7 Length = 263 Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 61/198 (30%), Positives = 89/198 (44%), Gaps = 22/198 (11%) Query: 74 QSQIAALRGQIEVLTNEITNAQQRQKDFYVDLDARLRKLEPQQVQVDGQTVAVGVSEQQA 133 QS I +LRGQI+ ++ +RQK + +D+ Q Q+ A + A Sbjct: 67 QSDIDSLRGQIQENQYQLNQVVERQKQILLQIDSLSSGGAAAQSTSGDQSGAAASTTPTA 126 Query: 134 YDAALSQ----FKGGDYKGAANA-----------------FADFLKRYPQSGYAPSAQYW 172 DA + K GD NA F +F+K YP S Y P+A YW Sbjct: 127 -DAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYW 185 Query: 173 QGNSLYAQRDYKGAIAAQQVVVKNYPDNPKAADALLNIASSQAELKDKAGAKKTLEQLIA 232 G Y + A VVKNYP +PKAADA+ + + D A AK +Q+I+ Sbjct: 186 LGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVIS 245 Query: 233 KYPNTPAAQTGKERMASL 250 KYP T A+ ++R+ ++ Sbjct: 246 KYPGTDGAKQAQKRLNAM 263