BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1020.p (1634 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value YPO3247 [U] COG3210 Large exoproteins involved in heme utilizati... 286 2e-76 RSp1444 [U] COG3210 Large exoproteins involved in heme utilizati... 276 4e-73 PA4082 [U] COG3210 Large exoproteins involved in heme utilizatio... 251 1e-65 PA4625 [U] COG3210 Large exoproteins involved in heme utilizatio... 238 7e-62 PA4541 [U] COG3210 Large exoproteins involved in heme utilizatio... 233 4e-60 >YPO3247 [U] COG3210 Large exoproteins involved in heme utilization or adhesion Ype Yersinia pestis Length = 1910 Score = 286 bits (733), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 206/539 (38%), Positives = 292/539 (54%), Gaps = 55/539 (10%) Query: 6 MN-RIYRLVWSHVQQAWVIVSERTRGQGKKVS----------RR---------LAAAAAL 45 MN ++Y+L++ + V E TR G+ S RR + AL Sbjct: 1 MNSKLYKLIFCRRLGCLIAVGEFTRSYGRAFSSKGGQAGNNQRRAVGILSRLAMMTGLAL 60 Query: 46 SVASALAMAGPS---GGAVTAGSGSISQSGNTTTITQGSQNLSVNWQSFNTTSAEKVNFV 102 + L +A P G V G G + Q +T T+TQ + L++NW SF+ V + Sbjct: 61 GIFPLLVLAHPVLPVNGHVVIGQGMLDQQSSTLTVTQQTDKLAINWDSFDIAHGHSVIYA 120 Query: 103 QPSTSAIAVNRIQDVNATQFMGQLNANGQVYLINPNGILFGAGAQVNVGGLVASTLDI-N 161 QP + +IA+N++Q +A+Q G+L ANGQV+L+NP GILFG AQVNVGGLVAST + N Sbjct: 121 QPGSQSIALNQVQGQSASQIYGRLQANGQVFLLNPRGILFGKEAQVNVGGLVASTKYMSN 180 Query: 162 DAALGSSTRNFSGMGSGSIVNQGSINSANGGYVAFLGKQVANQ--GSITTTAGTTALAAG 219 L R G G+I+NQ ++ SA GGY+A +G ++ NQ GSITT G T LA G Sbjct: 181 PEFLSGDYRLIGGESEGNIINQANLRSAPGGYIALVGNRIDNQRSGSITTPQGNTVLAVG 240 Query: 220 SDVTLSFAGNSLVSLRVNQSTLDSLSGNGGLIQADGGTVLLSAGARDTVLASVVNNTGII 279 VTL+ +L+ +++ T+ +L NGGLIQADGG + L+A +D ++ +V++NTGI+ Sbjct: 241 HSVTLNLDHGNLLGVQIQGETVAALIQNGGLIQADGGVIQLTAKGKDMLMDTVIDNTGIL 300 Query: 280 QARSVQNVNGTIVLEAGSHGTATNSGTLDASGRNAGETGGTVKLLGGTVAQTSGGRIDVA 339 QA+ + NG I L+ G G + GT+D + N GG + G + I Sbjct: 301 QAKGLSAKNGAIYLDGGGEGVVSQMGTIDVN--NQQGRGGRAVVEGKRIYLNKNSNIKAK 358 Query: 340 GDAGGGTAYVGGNFLGAGPE-QNATTTTVEAGSSIDASAVNSGNGGRVALWSDGTTRFDG 398 G AGGGT VGG + G + +NAT ++ GS ID SA +G GG LWS+ T F G Sbjct: 359 GTAGGGTVLVGGGWQGKDNQIRNATAVVMDKGSDIDVSASRNGPGGSAVLWSEDYTGFHG 418 Query: 399 SITARGGAASGNGGAVETSGLKLKIGSTASVNTLAPRGSAGNWLLDPADI---------- 448 +I ARGG SG+GG VETS + + + V+ A RGSAG WLLDPA++ Sbjct: 419 NIRARGGPQSGDGGQVETSSQR-NLQAFGQVDASAVRGSAGYWLLDPAEVTIVSSGAESG 477 Query: 449 ---KIGSI--AFWGSNYGIDVDSAVLTAALNNG---------NVTIKTSRSGPSCGVAC 493 K+G+I F+ S + I + +A +T LN+ NVTI TS S + C Sbjct: 478 VMTKVGNIPAEFFSSAH-IFIPTANITQILNSSINTQLNSGTNVTITTSNSSLTGCQWC 535 >RSp1444 [U] COG3210 Large exoproteins involved in heme utilization or adhesion Rso Ralstonia solanacearum Length = 1371 Score = 276 bits (705), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 200/445 (44%), Positives = 272/445 (61%), Gaps = 12/445 (2%) Query: 58 GGAVTAGSGSISQSGNTTTITQGSQNLSVNWQSFNTTSAEKVNFVQPSTSAIAVNRIQDV 117 GG VT+GSGSI Q+G TTTITQ S L+++W +F + E VNF+QP AIA+NR+ Sbjct: 60 GGTVTSGSGSIGQNGTTTTITQTSSRLAIDWSAFGIQAGETVNFIQPGAGAIALNRVTGH 119 Query: 118 NATQFMGQLNANGQVYLINPNGILFGAGAQVNVGGLVASTLDINDAALGSSTRNFSGMGS 177 AT +G LNANG V+++NPNG+LFG+GAQVNVGGLVASTL +++A + SG + Sbjct: 120 EATSILGSLNANGTVFILNPNGVLFGSGAQVNVGGLVASTLGLSNADFEAGRYALSGGST 179 Query: 178 GSIVNQGSINSANGGYVAFLGKQVANQGSITTTAGTTALAAGSDVTLSFAGNSLVSLRVN 237 + NQG+I +GG VA + V N G+I+ G+ LA +VTL+ A S + ++ Sbjct: 180 AGVTNQGTITVPSGGKVALIANSVDNAGNISAPRGSVLLAGAGNVTLTLADGSPLGYTIS 239 Query: 238 QSTLDSLSGNGGLIQADGGTVLLSAGARDTVLASVVNNTGIIQARSVQNVNGTIVLEAGS 297 +L NGG+I ADGG V+L+A D++ SVVN TG+++AR+V N GTI L Sbjct: 240 AGAARTLVNNGGMIVADGGRVVLTARGLDSLSESVVNTTGVVRARTVGNNQGTIELIGDP 299 Query: 298 -HGTATNSGTLDASGRNAGETGGTVKLLGGTVAQTSGGRIDVAGDAGGGTAYVGGNFLGA 356 G SG +DAS + G GG+VK+LG V G +IDV+G AGGGTA +GGN GA Sbjct: 300 VAGLTQVSGQIDASAPDGGGNGGSVKVLGTKVGVFDGAQIDVSGMAGGGTALIGGNAQGA 359 Query: 357 GPEQNATTTTVEAGSSIDASAVNSGNGGRVALWSDGTTRFDGSITARGGAASGNGGAVET 416 GPE NAT T V ++IDASA+ GNGGR+ +W GS++A GGA GNGG VET Sbjct: 360 GPEPNATATYVAPTAAIDASAIRQGNGGRLIVWGTDVANVHGSLSANGGAQGGNGGHVET 419 Query: 417 SGLKLKIGSTASVNTLAPRGSAGNWLLDPADIKIGS-----IAFWGSNY-----GIDVDS 466 SG L A G+ G WLLDP ++ + + AF G+ + G V++ Sbjct: 420 SGHALDTDGIAVSVAGGGGGTGGLWLLDPYNVTLSAGTQTGGAFSGNVWTPSASGSLVNT 479 Query: 467 AVLTAALNN-GNVTIKTSRSGPSCG 490 + + + LN+ GNVTI T+ +G G Sbjct: 480 SSIQSLLNSGGNVTITTTGAGTQEG 504 >PA4082 [U] COG3210 Large exoproteins involved in heme utilization or adhesion Pae Pseudomonas aeruginosa Length = 1018 Score = 251 bits (641), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 182/467 (38%), Positives = 262/467 (56%), Gaps = 41/467 (8%) Query: 6 MNRIYRLVWSHVQQAWVIVSERTRGQGKKVSRRLAAAA----ALSVASALAMAGPSGGAV 61 MN+ Y LVW+ Q W +VSE +R +GK + A A+ + A A A A PSGG V Sbjct: 1 MNKCYALVWNVSQGCWNVVSEGSRRRGKPAGAKAAIASVLALLGATALAPAYALPSGGTV 60 Query: 62 TAGS--GSISQSG-NTTTITQGSQNLSVNWQSFNTTSAEKVNFVQPSTSAIAVNRIQDVN 118 GS G I SG N+ ++ Q L NW SF+ + E+V F QPS+S+IA+NR+ Sbjct: 61 VGGSANGEIHLSGGNSLSVNQKVDKLIANWDSFSVAAGERVIFNQPSSSSIALNRVIGTK 120 Query: 119 ATQFMGQLNANGQVYLINPNGILFGAGAQVNVGGLVASTLDINDAAL-GSSTR-NFSGMG 176 A+ G+++ANGQV+L+NPNG+LFG GAQVNVGGLVASTLDI DA G+S+R F+G Sbjct: 121 ASDIQGRIDANGQVFLVNPNGVLFGRGAQVNVGGLVASTLDITDAEFNGNSSRYRFTGPS 180 Query: 177 SGSIVNQG-SINSANGGYVAFLGKQVANQGSITTTAGTTALAAGSDVTLSFAGNSLVSLR 235 + ++N G +I +A GG +A LG QV N+G++ G L AGSD+TL+F GN L+ +R Sbjct: 181 TNGVLNHGGAITAAEGGSIALLGAQVDNRGTVLAQMGGVGLGAGSDLTLNFDGNKLLDIR 240 Query: 236 VNQSTLDSLSGNGGLIQADGGTVLLSAGARDTVLASVVNNTGIIQARSVQNVNGTIVLEA 295 V+ ++L+ NGGL++ADGG VL++A + +L +VVN+ G I+ARS++ NG IVL+ Sbjct: 241 VDAGVANALASNGGLLKADGGRVLMAARTANALLNTVVNSQGAIEARSLRGKNGRIVLDG 300 Query: 296 GSHGTATNSGTLDASGRNAGETGGTVKLLGGTVAQTSGGRID-VAGDAGGGTAYVGGNFL 354 G G G L A+ N GGTV++ G V G +++ +A + GT + + + Sbjct: 301 GPDGKVMVGGALSANALNGPGHGGTVEVRGQAVEVALGTQVNTLASNGLNGTWKIAADKI 360 Query: 355 GAGP--------------EQNATTTTVEAGSS-----IDASAVNSGNGGRVALWSDGTTR 395 P +N +T +E S+ +D S VN +G R+ L S Sbjct: 361 DVRPSAVSDGVTVHADTLSRNLASTNIELVSTKGDLDLDGS-VNWASGNRLGLGSAADLT 419 Query: 396 FDGSITARGGAASGNGGAVETSGLKLKIGSTASVNTLAPRGSAGNWL 442 +G + A G A GL+LK +N G AG+ L Sbjct: 420 LNGRLNASGAKA----------GLELKAEGAIDINDKIVLGGAGSAL 456 >PA4625 [U] COG3210 Large exoproteins involved in heme utilization or adhesion Pae Pseudomonas aeruginosa Length = 2154 Score = 238 bits (608), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 175/442 (39%), Positives = 239/442 (54%), Gaps = 20/442 (4%) Query: 25 SERTRGQGKKVSRR----LAAAAALSVASA---LAMAGPSGGAVTAGSGSISQSGNTTTI 77 S+R + K R LAA++ L A A AMA P+G ISQ G TT I Sbjct: 6 SQRGKRTSSKAGREGRFVLAASSTLMFAIASINAAMAAPTGAQFNPNEIKISQQGKTTLI 65 Query: 78 TQGSQNLSVNWQSFNTTSAEKVNFVQPSTSAIAVNRIQDVNATQFMGQLNANGQVYLINP 137 Q +Q +NW+ F+ ++ E V F QP ++ +NR+ + G+++A GQV + N Sbjct: 66 DQSTQRAIINWKGFDVSADEAVRFNQPGVTSSTLNRVTAGQESVIAGRISAPGQVIIYNS 125 Query: 138 NGILFGAGAQVNVGGLVASTLDINDAALGSSTRNFSGMGS--GSIVNQGSINSANGGYVA 195 NG++F A+V+VG L+ +T +I+D F G+ IVN GSI+ A G A Sbjct: 126 NGVVFSGSAKVDVGSLITTTANISDEHFRQGKLIFDQPGNPDARIVNDGSISVAEKGLAA 185 Query: 196 FLGKQVANQGSITTTAGTTALAAGSDVTLSFAGNSLVSLRV------NQSTLDSLSGNGG 249 F+ VAN G I GT A+AAG+ T+ G+ LVS+ V +L NGG Sbjct: 186 FVAPSVANNGVINARLGTVAMAAGNAATIDLYGDGLVSIAVTDPVTRKPQDAQALVSNGG 245 Query: 250 LIQADGGTVLLSAGARDTVLASVVNNTGIIQARSVQNVNGTIVLEAGSHGTATNSGTLDA 309 IQADGG+VL++A V+ + VN +G+I AR + G++ L + S G +G +D Sbjct: 246 AIQADGGSVLITAEQASRVVDNAVNLSGVILARGTEVREGSVALVSKS-GDIQIAGKIDV 304 Query: 310 SGRNAGETGGTVKLLGGTVAQTSGGRIDVAGDAGGGTAYVGGNFLGAGPEQNATTTTVEA 369 SG + GG V + G VA S ID G A GG+ +GG+F G G A T+ Sbjct: 305 SGP---KNGGDVLVSGQQVALASTASIDARGTAQGGSVRIGGDFQGRGELPRAKNATLAK 361 Query: 370 GSSIDASAVNSGNGGRVALWSDGTTRFDGSITARGGAASGNGGAVETSG-LKLKIGSTAS 428 G+SID SA GNGG +WSDG TR DG I ARGGA GNGG VETSG + L I +A Sbjct: 362 GASIDVSATGKGNGGLAVVWSDGNTRMDGRILARGGAQGGNGGLVETSGKVNLSIADSAY 421 Query: 429 VNTLAPRGSAGNWLLDPADIKI 450 V+ AP G+ G WLLDP ++I Sbjct: 422 VSVAAPYGNGGTWLLDPTTLRI 443 >PA4541 [U] COG3210 Large exoproteins involved in heme utilization or adhesion Pae Pseudomonas aeruginosa Length = 1417 Score = 233 bits (593), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 132/313 (42%), Positives = 193/313 (61%), Gaps = 10/313 (3%) Query: 6 MNRIYRLVWSHVQQAWVIVSERTR-----GQGKKVSRRLAAAAALSV-ASALAMAGPSGG 59 MN+ Y LVW+ W + SE TR G+GK + +A A+ L + A A A PSG Sbjct: 1 MNKSYTLVWNQATGCWNVASEGTRRRSKSGRGKALV--VAGASLLGLFCQAPAFALPSGA 58 Query: 60 AVTAGSGSISQS--GNTTTITQGSQNLSVNWQSFNTTSAEKVNFVQPSTSAIAVNRIQDV 117 V +G S G I Q S L NW F+ + E+V+F QP A+A+NR+ Sbjct: 59 TVVSGDAGFQTSTDGRHMVIDQQSHKLITNWNEFSVRADERVSFHQPGQDAVALNRVIGR 118 Query: 118 NATQFMGQLNANGQVYLINPNGILFGAGAQVNVGGLVASTLDINDAALGSSTRNFSGMGS 177 N + G+++ANG+V+L+NPNG++FG AQVNVGGLVASTLD+ D + FSG Sbjct: 119 NGSDIQGRIDANGKVFLVNPNGVVFGKSAQVNVGGLVASTLDLADRDFLAGNYQFSGDSG 178 Query: 178 GSIVNQGSINSANGGYVAFLGKQVANQGSITTTAGTTALAAGSDVTLSFAGNSLVSLRVN 237 ++ N GS+ ++ GG +A LG +V+N G I G AL AG + L+F G+ L++L+V+ Sbjct: 179 ATVSNAGSLQASEGGSIALLGARVSNDGLIQAQLGDVALGAGQGINLNFDGDGLLNLQVD 238 Query: 238 QSTLDSLSGNGGLIQADGGTVLLSAGARDTVLASVVNNTGIIQARSVQNVNGTIVLEAGS 297 + ++D+L+ NGGLI+ADGG VL+SA + D++L +VVNN G ++AR++++ G IVL+ G Sbjct: 239 KGSVDALAHNGGLIRADGGQVLMSARSADSLLKTVVNNQGTLEARTLRSAEGRIVLDGGE 298 Query: 298 HGTATNSGTLDAS 310 GT +G DAS Sbjct: 299 QGTVRVAGKQDAS 311