BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0966.p         (192 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2526 [P] COG0605 Superoxide dismutase Rso Ralstonia solanacearum   313   1e-85
STM1431 [P] COG0605 Superoxide dismutase Sty Salmonella typhimur...   294   8e-80
PA4366 [P] COG0605 Superoxide dismutase Pae Pseudomonas aeruginosa    293   1e-79
NMA1104 [P] COG0605 Superoxide dismutase NmA Neisseria meningiti...   290   2e-78
sodB [P] COG0605 Superoxide dismutase Eco Escherichia coli K12        288   4e-78

>RSc2526 [P] COG0605 Superoxide dismutase Rso Ralstonia solanacearum
          Length = 192

 Score =  313 bits (802), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 158/192 (82%), Positives = 172/192 (89%)

Query: 1   MAHTLPALPYDLDALAPTISKETLEYHYGKHHQTYVTNLNNLIPGTEFENLSLEEIIKKS 60
           MAHTLP LPY LDALAP ISKETLE+HYGKHHQTYVTNLNNLIPGTEFENLSLE+I+KKS
Sbjct: 1   MAHTLPPLPYALDALAPHISKETLEFHYGKHHQTYVTNLNNLIPGTEFENLSLEDIVKKS 60

Query: 61  SGGIFNNAAQVWNHTFYWNGLTPKGQGAPSGALADAINAKWGSFDAFKAEFTKQGLANFG 120
           SGG+FNNAAQVWNHTFYWNGL P G GAP+GALADAINAKWGSFD FK EFTK  +  FG
Sbjct: 61  SGGLFNNAAQVWNHTFYWNGLKPNGGGAPAGALADAINAKWGSFDKFKEEFTKVAIGTFG 120

Query: 121 SGWTWLVKKADGTLDIVNTTGAGTPLTTDSKPLLTVDVWEHAYYIDYRNARAKYVENYWG 180
           SGW WLVKKADG+LD+V+T+ A TPLTTD+KPLLT DVWEHAYYIDYRNAR KYVE +W 
Sbjct: 121 SGWAWLVKKADGSLDLVSTSNAATPLTTDAKPLLTCDVWEHAYYIDYRNARPKYVEAFWS 180

Query: 181 IINWDFVAKNFA 192
           ++NWDFVA NFA
Sbjct: 181 LVNWDFVASNFA 192


>STM1431 [P] COG0605 Superoxide dismutase Sty Salmonella typhimurium LT2
          Length = 193

 Score =  294 bits (753), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 140/192 (72%), Positives = 156/192 (81%)

Query: 1   MAHTLPALPYDLDALAPTISKETLEYHYGKHHQTYVTNLNNLIPGTEFENLSLEEIIKKS 60
           M+  LPALPY  DALAP IS ETLEYHYGKHHQTYVTNLNNLI GT FE  SLEEI++ S
Sbjct: 1   MSFELPALPYAKDALAPHISAETLEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIVRTS 60

Query: 61  SGGIFNNAAQVWNHTFYWNGLTPKGQGAPSGALADAINAKWGSFDAFKAEFTKQGLANFG 120
            GGIFNNAAQVWNHTFYWN L P   G P+G LADAI A +GSF  FKA+FT   + NFG
Sbjct: 61  EGGIFNNAAQVWNHTFYWNCLAPNAGGEPTGKLADAIAASFGSFAEFKAQFTDAAIKNFG 120

Query: 121 SGWTWLVKKADGTLDIVNTTGAGTPLTTDSKPLLTVDVWEHAYYIDYRNARAKYVENYWG 180
           SGWTWLVK ADG L IV+T+ AGTPLTTD+ PLLTVDVWEHAYYIDYRNAR  Y+E++W 
Sbjct: 121 SGWTWLVKSADGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPNYLEHFWA 180

Query: 181 IINWDFVAKNFA 192
           ++NW+FVAKN A
Sbjct: 181 LVNWEFVAKNLA 192


>PA4366 [P] COG0605 Superoxide dismutase Pae Pseudomonas aeruginosa
          Length = 193

 Score =  293 bits (751), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 140/192 (72%), Positives = 155/192 (80%)

Query: 1   MAHTLPALPYDLDALAPTISKETLEYHYGKHHQTYVTNLNNLIPGTEFENLSLEEIIKKS 60
           MA  LP LPY+ +AL P IS ETLEYH+ KHH TYV NLNNLIPGTEFE  SLEEI+K S
Sbjct: 1   MAFELPPLPYEKNALEPHISAETLEYHHDKHHNTYVVNLNNLIPGTEFEGKSLEEIVKSS 60

Query: 61  SGGIFNNAAQVWNHTFYWNGLTPKGQGAPSGALADAINAKWGSFDAFKAEFTKQGLANFG 120
           SGGIFNNAAQVWNHTFYWN L+P G G P+GALADAINA +GSFD FK EFTK  +  FG
Sbjct: 61  SGGIFNNAAQVWNHTFYWNCLSPNGGGQPTGALADAINAAFGSFDKFKEEFTKTSVGTFG 120

Query: 121 SGWTWLVKKADGTLDIVNTTGAGTPLTTDSKPLLTVDVWEHAYYIDYRNARAKYVENYWG 180
           SGW WLVKKADG+L + +T GAG PLT+   PLLT DVWEHAYYIDYRN R KYVE +W 
Sbjct: 121 SGWGWLVKKADGSLALASTIGAGNPLTSGDTPLLTCDVWEHAYYIDYRNLRPKYVEAFWN 180

Query: 181 IINWDFVAKNFA 192
           ++NWDFVAKNFA
Sbjct: 181 LVNWDFVAKNFA 192


>NMA1104 [P] COG0605 Superoxide dismutase NmA Neisseria meningitidis Z2491
          Length = 195

 Score =  290 bits (741), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 134/192 (69%), Positives = 155/192 (80%)

Query: 1   MAHTLPALPYDLDALAPTISKETLEYHYGKHHQTYVTNLNNLIPGTEFENLSLEEIIKKS 60
           M H LP LPY+LDAL+P +SKETLE+HYGKHHQTY+TNLNN I GTEFENL LEEI+KKS
Sbjct: 1   MEHKLPQLPYELDALSPHLSKETLEFHYGKHHQTYITNLNNQIKGTEFENLPLEEIVKKS 60

Query: 61  SGGIFNNAAQVWNHTFYWNGLTPKGQGAPSGALADAINAKWGSFDAFKAEFTKQGLANFG 120
           SGG+FNNAAQ WNHTFYW G TPKGQG PSG LA AI+AKWGSF+ F+  F+      FG
Sbjct: 61  SGGVFNNAAQTWNHTFYWLGFTPKGQGKPSGELAAAIDAKWGSFEKFQEAFSACAAGTFG 120

Query: 121 SGWTWLVKKADGTLDIVNTTGAGTPLTTDSKPLLTVDVWEHAYYIDYRNARAKYVENYWG 180
           SGW WLVK   G LD+V+T+ A TPLTT++ PLLT DVWEHAYYIDYRN+R  Y++ +W 
Sbjct: 121 SGWAWLVKTPAGGLDLVSTSNAATPLTTENTPLLTCDVWEHAYYIDYRNSRPNYLKGFWE 180

Query: 181 IINWDFVAKNFA 192
           I+NWD VAK FA
Sbjct: 181 IVNWDEVAKRFA 192


>sodB [P] COG0605 Superoxide dismutase Eco Escherichia coli K12
          Length = 193

 Score =  288 bits (738), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 136/192 (70%), Positives = 156/192 (81%)

Query: 1   MAHTLPALPYDLDALAPTISKETLEYHYGKHHQTYVTNLNNLIPGTEFENLSLEEIIKKS 60
           M+  LPALPY  DALAP IS ET+EYHYGKHHQTYVTNLNNLI GT FE  SLEEII+ S
Sbjct: 1   MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSS 60

Query: 61  SGGIFNNAAQVWNHTFYWNGLTPKGQGAPSGALADAINAKWGSFDAFKAEFTKQGLANFG 120
            GG+FNNAAQVWNHTFYWN L P   G P+G +A+AI A +GSF  FKA+FT   + NFG
Sbjct: 61  EGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFG 120

Query: 121 SGWTWLVKKADGTLDIVNTTGAGTPLTTDSKPLLTVDVWEHAYYIDYRNARAKYVENYWG 180
           SGWTWLVK +DG L IV+T+ AGTPLTTD+ PLLTVDVWEHAYYIDYRNAR  Y+E++W 
Sbjct: 121 SGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWA 180

Query: 181 IINWDFVAKNFA 192
           ++NW+FVAKN A
Sbjct: 181 LVNWEFVAKNLA 192