BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0838.p (293 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2755 [G] COG3386 Gluconolactonase Rso Ralstonia solanacearum 292 7e-79 CC1805 Non COG 179 8e-45 SMa0717_2 [G] COG3386 Gluconolactonase Sme Sinorhizobium meliloti 178 2e-44 SSO2705 [G] COG3386 Gluconolactonase Sso Sulfolobus solfataricus 177 2e-44 AGpA685_2 [G] COG3386 Gluconolactonase Atu Agrobacterium tumefac... 167 3e-41 >RSc2755 [G] COG3386 Gluconolactonase Rso Ralstonia solanacearum Length = 303 Score = 292 bits (747), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 151/297 (50%), Positives = 198/297 (66%), Gaps = 7/297 (2%) Query: 1 MNAQLLVDGHHELGEGVLWCERSQSLFWTDIHASRLWNHDPHSGATRSWSMPERLCCFAF 60 M A L D LGEG++W + L+WTDI S LW HDP +G R W MP+R+ F Sbjct: 1 MIAIPLSDLRCTLGEGIVWDDALGVLWWTDIQESLLWQHDPATGRERQWPMPQRVGSFVL 60 Query: 61 TADPERLLIGLESRLAFFNLNTAAITPICRIEDDLPSTRLNDGRCDRQGRFVFGTLNEDA 120 TA P L++GL ++A F+ T A+TP+ +E P+TR+NDGR DR G +VFGTL+E Sbjct: 61 TATPGVLIVGLAKQVARFDARTGALTPLVDVEAGNPATRINDGRADRAGNYVFGTLHEGG 120 Query: 121 SREPIASFYRLNADLSLERLALPGIAISNSICFSLDGKLMYHCDSMAGKIMVCDYDPASG 180 + + SFYR L+RLALPGIAI+NSI FS +G MY CD+ + +I CDYD +G Sbjct: 121 P-QALGSFYRFTPLGVLQRLALPGIAIANSIAFSPEGTTMYWCDTPSRRIHACDYDGQTG 179 Query: 181 AVSGQRVFADL------AQQPGGPDGSTVDAEGYVWNAQWGGSRVVRFAPDGVIDRIIDL 234 V+ RVFADL G PDGSTVDA+G +WNA+WGG+RV R+APDG + + Sbjct: 180 TVARVRVFADLRDADAGTAHRGSPDGSTVDADGCLWNAEWGGNRVTRYAPDGRVLAHHPV 239 Query: 235 PTAQPSCVAFGGAALDTLFVTTAHEGMSAQQRAQDALAGAVFAVPQVGVRGLPEVRF 291 P +QP+C AFGGAALDTL++ +A +G+SA++ A+D LAGAVF + GVRGLPE RF Sbjct: 240 PASQPTCPAFGGAALDTLYLASARDGLSARRLAEDVLAGAVFRLAVGGVRGLPEARF 296 >CC1805 Non COG Length = 293 Score = 179 bits (453), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 104/278 (37%), Positives = 144/278 (51%), Gaps = 2/278 (0%) Query: 13 LGEGVLWCERSQSLFWTDIHASRLWNHDPHSGATRSWSMPERLCCFAFTADPERLLIGLE 72 LGE LW + L+W D A +W +DP + RS P+ + P L+ GL Sbjct: 15 LGESPLWDADAGVLYWVDSMAPAIWRYDPFTSEQRSIPAPKPIGSVVL-GRPGELIAGLA 73 Query: 73 SRLAFFNLNTAAITPICRIEDDLPSTRLNDGRCDRQGRFVFGTLNEDASREPIASFYRLN 132 + L+T A TPI + P R NDG+ DRQGRFV GT+ I YR + Sbjct: 74 DGVYRVQLDTGAFTPIALPDTLAPIERFNDGKADRQGRFVTGTMAMHNETGRIGKLYRFS 133 Query: 133 ADLSLERLALPGIAISNSICFSLDGKLMYHCDSMAGKIMVCDYDPASGAVSGQRVFADLA 192 A + E L I I+NS CFS G +Y DS+ + YDP +GAV +R F D Sbjct: 134 AGGAWEVLPTEPIEIANSTCFSPSGDTLYFADSLRHMVWAFSYDPKTGAVGEKRDFFDTT 193 Query: 193 QQPGGPDGSTVDAEGYVWNAQWGGSRVVRFAPDGVIDRIIDLPTAQPSCVAFGGAALDTL 252 PDG+TVDAEG++W A +++R +PDG +DR+++ P SC AFGG LD L Sbjct: 194 GFNSAPDGATVDAEGHIWLALVQAQKLIRISPDGRLDRVVESPAPFCSCPAFGGEDLDIL 253 Query: 253 FVTTAHEGMSAQQRAQDALAGAVFAVPQVGVRGLPEVR 290 +VT+ + + DA +G + A +GVRG+ E R Sbjct: 254 YVTSISDSGGRLKTDVDA-SGRLMAFHGLGVRGIAETR 290 >SMa0717_2 [G] COG3386 Gluconolactonase Sme Sinorhizobium meliloti Length = 302 Score = 178 bits (451), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 101/291 (34%), Positives = 150/291 (51%), Gaps = 4/291 (1%) Query: 2 NAQLLVDGHHELGEGVLWCERSQSLFWTDIHASRLWNHDPHSGATRSWSMPERLCCFAFT 61 + Q ++ +LGE +W ER + L+W DI + DP +G S ++ +L Sbjct: 15 DVQCVLPWGAQLGEAPVWVEREKRLYWVDILHPAVHRFDPVTGKNESCNV-AKLVSAVLP 73 Query: 62 ADPERLLIGLESRLAFFNLNTAAITPICRIEDDLPSTRLNDGRCDRQGRFVFGTLNEDAS 121 E L++ + + F+ + P E LP RLND + D GR G++ D S Sbjct: 74 TRNEGLIVASQDGVEHFDFDRGDFNPFAEPEPGLPENRLNDAKVDPSGRLWVGSMRLDVS 133 Query: 122 REPIASFYRLNADLSLERLALPGIAISNSICFSLDGKLMYHCDSMAGKIMVCDYDPASGA 181 R P S YRL + + R A G ++N + +S D Y D++ G I D+D G+ Sbjct: 134 R-PTGSLYRLTSAGEVTR-AGSGFTVANGLAWSPDSSTFYFVDTVPGIIYAYDFDAREGS 191 Query: 182 VSGQRVFADLAQQPGGPDGSTVDAEGYVWNAQWGGSRVVRFAPDGVIDRIIDLPTAQPSC 241 ++ +RVF + + G PDG VDA+G VW A W G RV R+ PDG +DR ++LP +P+ Sbjct: 192 IANRRVFVTVPEAEGRPDGLAVDADGGVWCAIWDGWRVNRYRPDGRLDRAVELPVPRPTS 251 Query: 242 VAFGGAALDTLFVTTAHEGMSAQQRAQDALAGAVFAVPQVGVRGLPEVRFA 292 VAFGG L TLF+T+A + A + L+G +FA G RGLP F Sbjct: 252 VAFGGDELATLFITSARTRLPASTLTEAPLSGGIFAC-NPGARGLPTSLFG 301 >SSO2705 [G] COG3386 Gluconolactonase Sso Sulfolobus solfataricus Length = 285 Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 100/281 (35%), Positives = 143/281 (50%), Gaps = 13/281 (4%) Query: 13 LGEGVLWCERSQSLFWTDIHASRLWNHDPHSGATRSWSMPERLCCFAFTADPERLLIGLE 72 LGEG ++ + LFW DI R+ +D ++G + MP+ + D +R++ + Sbjct: 15 LGEGPVYDKELNKLFWVDIEGKRIIVNDLNTGTEVFYEMPDLISSLC-VIDDKRVIATIR 73 Query: 73 SRLAFFNLNTAAITPICRIEDDLPSTRLNDGRCDRQGRFVFGTLNEDASREPIASFYRLN 132 NL+ I I +E D+ S R NDG+CD+ GR+ GT+N + R+P SFY+L Sbjct: 74 HGFYIVNLDRGEIQKIAEVETDMESNRFNDGKCDKLGRYWAGTMNMN-ERKPTGSFYKL- 131 Query: 133 ADLSLERLALPGIAISNSICFSLDGKLMYHCDSMAGKIMVCDYDPASGAVSGQRVFADLA 192 D L G+ +SN + + D M+ DS K+ V D+D G + +RV D Sbjct: 132 -DTGKITKILEGLTVSNGLGWDPDNTQMFLIDSPVRKVFVFDFDLNKGEIYNRRVAVDFG 190 Query: 193 QQPGGPDGSTVDAEGYVWNAQWGGSRVVRFAPD-GVIDRIIDLPTAQPSCVAFGGAALDT 251 +PG PDG VD EGY+W A WGG +V R+ P G I +P + V FG LD Sbjct: 191 NEPGNPDGMAVDEEGYIWVAHWGGGKVSRWNPKTGKKLFEIKVPATYVTSVTFGTQELDQ 250 Query: 252 LFVTTAHEGMSAQQRAQDALAGAVFAVPQVGVRGLPEVRFA 292 LF+TTA ++QD LAG F + VRGL RF Sbjct: 251 LFITTAG-------KSQDPLAGKTFTT-KANVRGLQNFRFK 283 >AGpA685_2 [G] COG3386 Gluconolactonase Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 279 Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 96/266 (36%), Positives = 144/266 (54%), Gaps = 3/266 (1%) Query: 12 ELGEGVLWCERSQSLFWTDIHASRLWNHDPHSGATRSWSMPERLCCFAFTADPERLLIGL 71 +LGE +W E +L+W DI + DP +G + +L RLL+ Sbjct: 2 QLGESPVWHEGEDALYWVDILHPAVHRFDPATGRNETCET-GKLVSAVIPVTGGRLLVAS 60 Query: 72 ESRLAFFNLNTAAITPICRIEDDLPSTRLNDGRCDRQGRFVFGTLNEDASREPIASFYRL 131 + + + + + +TP E + RLND +C G G++ DAS+ P + YR+ Sbjct: 61 QDGVEWLDFASGRLTPFVSPEAGIADNRLNDAKCGPDGAIWVGSMRIDASK-PTGALYRI 119 Query: 132 NADLSLERLALPGIAISNSICFSLDGKLMYHCDSMAGKIMVCDYDPASGAVSGQRVFADL 191 NA+ + ER GI +SN + +S DG+ Y D++ G I D DPA+GA+S +R FA + Sbjct: 120 NANGASERKE-GGIIVSNGLGWSPDGRTFYFVDTVPGLIHAYDCDPATGALSQRREFARI 178 Query: 192 AQQPGGPDGSTVDAEGYVWNAQWGGSRVVRFAPDGVIDRIIDLPTAQPSCVAFGGAALDT 251 G PDG VDAEG VW A W G V R+ P+G +D++ID+P +PS +AFGG L T Sbjct: 179 PVADGRPDGLAVDAEGGVWCAIWDGWCVRRYLPNGKLDQVIDMPVPRPSSIAFGGPDLST 238 Query: 252 LFVTTAHEGMSAQQRAQDALAGAVFA 277 LF+T+A + A A L+G +F+ Sbjct: 239 LFITSARTRLPASTLADAPLSGGLFS 264