BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0791.p         (96 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0641 [O] COG0234 Co-chaperonin GroES (HSP10) Rso Ralstonia so...   151   3e-37
NMB1973 [O] COG0234 Co-chaperonin GroES (HSP10) Nme Neisseria me...   147   5e-36
NMA0472 [O] COG0234 Co-chaperonin GroES (HSP10) NmA Neisseria me...   147   7e-36
PA4386 [O] COG0234 Co-chaperonin GroES (HSP10) Pae Pseudomonas a...   128   2e-30
msl5812 [O] COG0234 Co-chaperonin GroES (HSP10) Mlo Mesorhizobiu...   122   2e-28

>RSc0641 [O] COG0234 Co-chaperonin GroES (HSP10) Rso Ralstonia
          solanacearum
          Length = 96

 Score =  151 bits (381), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 77/96 (80%), Positives = 83/96 (86%)

Query: 1  MNLRPLHDRVIVKRLDQETKTASGIVLPDAATEKPDQGEVLAVGNGKILEDGKVRPLSVK 60
          MNLRPLHDRVIVKRLD ETKTASGIV+PDAA EKPDQGEVLA+G GK  + G    L VK
Sbjct: 1  MNLRPLHDRVIVKRLDNETKTASGIVIPDAAAEKPDQGEVLAIGPGKKDDKGNPIALDVK 60

Query: 61 VGDRVLFGKYSGQAVKIDGQELLVMREEDLFAVVEK 96
          VGDRVLFGKY+GQAVK+DGQELLVMREED+ AVV K
Sbjct: 61 VGDRVLFGKYAGQAVKVDGQELLVMREEDIMAVVTK 96


>NMB1973 [O] COG0234 Co-chaperonin GroES (HSP10) Nme Neisseria
          meningitidis MC58
          Length = 96

 Score =  147 bits (371), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 71/96 (73%), Positives = 82/96 (85%)

Query: 1  MNLRPLHDRVIVKRLDQETKTASGIVLPDAATEKPDQGEVLAVGNGKILEDGKVRPLSVK 60
          M +RPLHDRV+VKRL+ E KTASGIVLP AA EKPD GEV+AVG GKI +DG  RPL VK
Sbjct: 1  MTIRPLHDRVVVKRLEAEEKTASGIVLPGAAAEKPDMGEVIAVGAGKIGKDGSRRPLDVK 60

Query: 61 VGDRVLFGKYSGQAVKIDGQELLVMREEDLFAVVEK 96
          VGD+++FGKYSGQ VK DG+ELLVMREED+F +VEK
Sbjct: 61 VGDKIIFGKYSGQTVKADGEELLVMREEDIFGIVEK 96


>NMA0472 [O] COG0234 Co-chaperonin GroES (HSP10) NmA Neisseria
          meningitidis Z2491
          Length = 96

 Score =  147 bits (370), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 71/96 (73%), Positives = 82/96 (85%)

Query: 1  MNLRPLHDRVIVKRLDQETKTASGIVLPDAATEKPDQGEVLAVGNGKILEDGKVRPLSVK 60
          M +RPLHDRV+VKRL+ E KTASGIVLP AA EKPD GEV+AVG GKI +DG  RPL VK
Sbjct: 1  MTIRPLHDRVVVKRLEAEEKTASGIVLPGAAAEKPDMGEVIAVGAGKIGKDGARRPLDVK 60

Query: 61 VGDRVLFGKYSGQAVKIDGQELLVMREEDLFAVVEK 96
          VGD+++FGKYSGQ VK DG+ELLVMREED+F +VEK
Sbjct: 61 VGDKIIFGKYSGQTVKADGEELLVMREEDIFGIVEK 96


>PA4386 [O] COG0234 Co-chaperonin GroES (HSP10) Pae Pseudomonas
          aeruginosa
          Length = 97

 Score =  128 bits (322), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 60/96 (62%), Positives = 83/96 (86%), Gaps = 1/96 (1%)

Query: 1  MNLRPLHDRVIVKRLDQETKTASGIVLPDAATEKPDQGEVLAVGNGKILEDGKVRPLSVK 60
          M LRPLHDRV+++R ++ETKTA GIVLP +A EKP++GEV+AVG G++L++G+VR L+VK
Sbjct: 1  MKLRPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNRGEVVAVGTGRVLDNGEVRALAVK 60

Query: 61 VGDRVLFGKYSG-QAVKIDGQELLVMREEDLFAVVE 95
          VGD+V+FG YSG  A+K+DG+ELLVM E ++ AV+E
Sbjct: 61 VGDKVVFGPYSGSNAIKVDGEELLVMGESEILAVLE 96


>msl5812 [O] COG0234 Co-chaperonin GroES (HSP10) Mlo Mesorhizobium loti
          Length = 98

 Score =  122 bits (305), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 53/93 (56%), Positives = 76/93 (81%)

Query: 2  NLRPLHDRVIVKRLDQETKTASGIVLPDAATEKPDQGEVLAVGNGKILEDGKVRPLSVKV 61
          NLRPLHDRV+V+R++ E+KTA GI++PD A EKP +GE++AVG+G   E GK+ PL VK 
Sbjct: 5  NLRPLHDRVVVRRVESESKTAGGIIIPDTAKEKPQEGEIIAVGSGARDEAGKLVPLDVKA 64

Query: 62 GDRVLFGKYSGQAVKIDGQELLVMREEDLFAVV 94
          GDR+LFGK+SG  VK++G++LL+M+E D+  ++
Sbjct: 65 GDRILFGKWSGTEVKLNGEDLLIMKEADIMGII 97