BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0783.p (476 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BS_mmr [GEPR] COG0477 Permeases of the major facilitator superfa... 396 e-110 mll2542 [GEPR] COG0477 Permeases of the major facilitator superf... 245 2e-64 XF1765 [GEPR] COG0477 Permeases of the major facilitator superfa... 209 1e-53 RSp1417 [GEPR] COG0477 Permeases of the major facilitator superf... 204 3e-52 Cgl1114 [GEPR] COG0477 Permeases of the major facilitator superf... 204 4e-52 >BS_mmr [GEPR] COG0477 Permeases of the major facilitator superfamily Bsu Bacillus subtilis Length = 466 Score = 396 bits (1018), Expect = e-110, Method: Compositional matrix adjust. Identities = 213/446 (47%), Positives = 296/446 (66%), Gaps = 1/446 (0%) Query: 20 SSGHRAGMLPLVALAIGFVMAMLDVTVVNVGLSSIASSLDAPLATLVWIVDGYTLTFAAM 79 S G+ L+ LA+GF+MA LDVTVVNV ++ + ++L L+ + W+VDGY LTFA++ Sbjct: 9 ESTSSTGISVLIVLALGFLMATLDVTVVNVAMADMKNTLSMSLSGVTWVVDGYILTFASL 68 Query: 80 LLVGGALADRFGARRLYLTGLLLFVLASLLCGAAPNGPFLIAARLLQGLGAAFFMPSSLS 139 LL GGALADRFG++ +Y+ GL +FV+AS LC A+ NG LIA RL+QG+GAA FMPSSLS Sbjct: 69 LLAGGALADRFGSKTIYILGLAVFVMASCLCAASINGQMLIAGRLIQGIGAALFMPSSLS 128 Query: 140 LLTHVYEDDRVRARMLGVWSATVGLAAAVGPLVGGVLIHWLGWRSVFLINVPVGLVGLLM 199 LL Y D+R RARM G+W+A V A+A+GP +GGVL+ GW+S+FLINVP+G L+ Sbjct: 129 LLAASYLDERARARMFGLWAALVSAASALGPFIGGVLVQLAGWQSIFLINVPIGAAALIS 188 Query: 200 ARKLIPQVAGHARALHLFSHLAGVVMLAALSFVLIQGPVYGWISPRILVGLAVAVLAAVA 259 A +++ +V G + +++ HL G++ L LS+ LIQGP GW SP ILV AVLA V Sbjct: 189 AYRILSRVPGKSSRVNIIGHLLGMMALGFLSYALIQGPSAGWRSPVILVAFTAAVLAFVL 248 Query: 260 LVRHELRGIAPLLPRALFATPQFAAANGIGFLINFGVYGNLFYLALFLQQGRGADALQTG 319 + E+ P+LP +L+ +F+AA IGFL+NF ++G +F L+LFLQ+ GA + G Sbjct: 249 FLLREISAKTPILPASLYKNGRFSAAQFIGFLLNFALFGGMFMLSLFLQEAGGASSFMAG 308 Query: 320 LQLVPMMAVIFFGNLMSGRMSAHWGPRVPLLLGLSVGAAFTAVA-ISFRPETPYWILALV 378 ++L+PMMAV GNL+ R++ + + + ++V + + P+ PYW LA++ Sbjct: 309 VELLPMMAVFVIGNLLFARLANRFEAGQLMFVSMAVSCIIALLLFVLISPDFPYWQLAVL 368 Query: 379 CAAANLGVSTAIPAMTTVVMQVAGKAHANSAAAALNANRQIGALVGVALMGAILHSVQAW 438 + NL +PAMTTV+MQ AG+ H N A AALNANRQIGALVGVA+ G I+H W Sbjct: 369 MSVMNLCTGITVPAMTTVIMQAAGQRHTNIAGAALNANRQIGALVGVAITGVIIHLSATW 428 Query: 439 SLRNGLAFGVMAAGYGTALWLVWRFV 464 G AF +M A Y A LVW F+ Sbjct: 429 YAGAGFAFLMMGAAYSLAALLVWLFL 454 >mll2542 [GEPR] COG0477 Permeases of the major facilitator superfamily Mlo Mesorhizobium loti Length = 505 Score = 245 bits (625), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 158/427 (37%), Positives = 244/427 (57%), Gaps = 21/427 (4%) Query: 28 LPLVA-LAIGFVMAMLDVTVVNVGLSSIASSLDAPLATLVWIVDGYTLTFAAMLLVGGAL 86 LPLVA + +G +A+LDV++VNV L +I +L L W+VD YTL +A +L G + Sbjct: 6 LPLVAAVYLGTFVALLDVSIVNVALPTIQQALHTDFGGLQWVVDAYTLCLSAFMLSSGLI 65 Query: 87 ADRFGARRLYLTGLLLFVLASLLCGAAPNGPFLIAARLLQGLGAAFFMPSSLSLLTHVYE 146 DR+G +R +L G+ +FV SL+C APN P L+A R++QG+ + +P +LS+LT + Sbjct: 66 GDRYGRKRSWLAGVGIFVAGSLICAVAPNLPALLAGRVVQGIAGSLLIPGALSILTQAFP 125 Query: 147 DDRVRARMLGVWSATVGLAAAVGPLVGGVLIHWLGWRSVFLINVPVGLVGLLMARKLIPQ 206 D R RA ++G W+A ++ VGP++GG+L+ +GW+S+FLIN+P+GL +++ I + Sbjct: 126 DPRERAGVIGGWAAFAAVSLVVGPVLGGILVQTVGWQSIFLINLPLGLFTIVLGAVSIEE 185 Query: 207 VAGHARALHLFSHLAGVVM----LAALSFVLIQGPVYGWISPRILVGLAVAVLAAVALVR 262 + H HL L G+ + L AL+F LI GW PR +V + V V+ + Sbjct: 186 TS-HPEHAHL--DLVGLALSILWLGALTFGLISAGESGWGDPRTIVAIIVGVVGLAVFLG 242 Query: 263 HELRGIAPLLPRALFATPQFAAANGIGFLINFGVYGNLFYLALFLQQGRGADALQTGLQL 322 E R P+LP LF +FA AN F + F Y +F+ ++FLQQ +G QTGL++ Sbjct: 243 FEARTPRPMLPLGLFRDVRFAVANVASFALGFTSYSCVFFFSMFLQQVQGWSPTQTGLRM 302 Query: 323 VPMMAVIFFGNLMSGRMSAHWGPRVPL-----LLGLSV-GAAFTAVAISFRPETPYWILA 376 P V + GR+SA +G + + L+GLS+ G + P TPY +L Sbjct: 303 APAFLVQIVVSPWIGRLSARYGHSLLMTAGYVLIGLSMLGMCWAG------PSTPYALLC 356 Query: 377 LVCAAANLGVSTAIPAMTTVVMQVAGKAHANSAAAALNANRQIGALVGVALMGAILHSVQ 436 ++ LG S AIP + M A + + +A +NA RQ G +G+AL+GA++ S++ Sbjct: 357 VLFTINGLGNSLAIPTGSAAAMSYAPRERSGMVSAVINATRQSGLAIGIALLGALM-SMR 415 Query: 437 AWSLRNG 443 A SL G Sbjct: 416 ATSLLTG 422 >XF1765 [GEPR] COG0477 Permeases of the major facilitator superfamily Xfa Xylella fastidiosa 9a5c Length = 472 Score = 209 bits (532), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 159/440 (36%), Positives = 230/440 (52%), Gaps = 8/440 (1%) Query: 7 PDAAALAAPVVPASSGHRAGMLPLVALAIGFVMAMLDVTVVNVGLSSIASSLDAPLATLV 66 PDAA+ AP P + R L+A+ +GF + LD VVNV L ++A L A + L Sbjct: 6 PDAASARAPDAPTPAAQRRAQATLIAVLLGFFVITLDAVVVNVALPTLAHDLGASVDGLQ 65 Query: 67 WIVDGYTLTFAAMLLVGGALADRFGARRLYLTGLLLFVLASLLCGAAPNGPFLIAARLLQ 126 W+VDGYTL F A+LL GAL DR GARR + GL++F+LAS+ CG AP L+ ARL+Q Sbjct: 66 WVVDGYTLMFGALLLSAGALVDRIGARRAFGLGLVVFILASMACGGAPTLATLVVARLVQ 125 Query: 127 GLGAAFFMPSSLSLLTHVYEDDRVRARMLGVWSATVGLAAAVGPLVGGVLIHWLGWRSVF 186 G GAA MP+S+SL+ Y D R + +W+ +A+ GP++GG L+ L WR +F Sbjct: 126 GAGAAVMMPASMSLIRQAYPDPVRRGHAVALWAMGGSVASTSGPVIGGWLVS-LDWRWIF 184 Query: 187 LINVPVGLVGL-LMARKLIPQVAGHARALHLFSHLAGVVMLAALSFVLIQGPVYGWISPR 245 +N+PVGL+ L +AR P A + ++ + AL + I+ G + Sbjct: 185 FVNLPVGLLTLAFLART--PASPRRASPFDAVGQVTAILAMGALIYGAIEAGAQGLGATP 242 Query: 246 ILVGLAVAVLAAVALVRHELRGIAPLLPRALFATPQFAAANGIGFLINFGVYGNLFYLAL 305 +L +A+ A A V + G P++P L A + +GF G +G F ++L Sbjct: 243 VLAAFVLALAALAAFVWSQRCGAHPMVPPGLLAPRNARISMAVGFTFMVGYFGLPFVMSL 302 Query: 306 FLQQGRGADALQTGLQLVPMMAVIFFGNLMSGRMSAHWGPRVPLLLGLSVGAAFTAVAIS 365 +LQQ RG A TG+ +PMM + S R++ +G R ++ GL A A S Sbjct: 303 YLQQHRGLSAPATGIAFLPMMLIGLVLTPFSARLAHRFGARTMIVSGLLSMAVGLAAVAS 362 Query: 366 FRPETPY-WILALVCAAANLGVSTAIPAMTTVVMQVAGKAHANSAAAALNANRQIGALVG 424 P WI AL+ G A P ++ V G A A +A+ N +RQ+G + Sbjct: 363 LPASAPVGWIAALMVLVGLSGPFVAPPVAAVLLSSVPG-ALAGTASGVFNTSRQVGGALA 421 Query: 425 VALMGAILHSVQAWSLRNGL 444 VA+ GA+L VQA S GL Sbjct: 422 VAVFGALL--VQAPSFMTGL 439 >RSp1417 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso Ralstonia solanacearum Length = 467 Score = 204 bits (520), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 144/414 (34%), Positives = 219/414 (52%), Gaps = 6/414 (1%) Query: 17 VPASSGHRAGMLPLVALAIGFVMAMLDVTVVNVGLSSIASSLDAPLATLVWIVDGYTLTF 76 + AS R L+ +I +MAMLD VV S+I + L A L+ L W ++ Y L+ Sbjct: 1 MKASEFDRTQKWVLILTSIATLMAMLDAMVVATATSAIRADLGASLSALQWTMNAYNLSL 60 Query: 77 AAMLLVGGALADRFGARRLYLTGLLLFVLASLLCGAAPNGPFLIAARLLQGLGAAFFMPS 136 AA+L+ G AL DRFG RR+++TGL +FV AS+ C A + +LIAAR++QG G A P Sbjct: 61 AALLMTGAALGDRFGRRRVFVTGLCVFVAASIACALARSAEWLIAARVVQGAGGALVTPL 120 Query: 137 SLSLLTHVYEDDRVRARMLGVWSATVGLAAAVGPLVGGVLIHWLGWRSVFLINVPVGLVG 196 S++LL+ + +R R + LG++ GLA +GP++GGV+ L W+ +F +NVP+GL Sbjct: 121 SMALLSAAFPPER-RGKALGLFGGITGLALILGPVLGGVIAGNLPWQWIFWLNVPIGLPL 179 Query: 197 LLMARKLIPQVAGHARALHLFSHLAGVVMLAALSFV--LIQGPVYGWISPRILVGLAVAV 254 +++A + IP G A AL + L +VM A++ V L++G GW + L V Sbjct: 180 IVLAVRRIPDSKGPAAALDIPGAL--LVMGASIGLVWGLMRGSSKGWSDSEAPLALVVGA 237 Query: 255 LAAVALVRHELRGIAPLLPRALFATPQFAAANGIGFLINFGVYGNLFYLALFLQQGRGAD 314 + V E R P++P LFA+ F++ FL G+YG +F+L F Q +G D Sbjct: 238 AFMICFVLWERRAKHPMIPMRLFASRAFSSGIAACFLFYAGMYGVVFFLPQFFQSAQGHD 297 Query: 315 ALQTGLQLVPMMAVIFFGNLMSGRMSAHWGPRVPLLLGLSVGA-AFTAVAISFRPETPYW 373 GL+L+P +FF ++G M G R ++ GL + A F +A + P T Y Sbjct: 298 PFAAGLRLLPWTVTLFFIAPLAGSMVDRIGERSVMVTGLLLQAIGFAWIAWAASPGTSYL 357 Query: 374 ILALVCAAANLGVSTAIPAMTTVVMQVAGKAHANSAAAALNANRQIGALVGVAL 427 L + G+S A PA V+ A+ N R +G G+A+ Sbjct: 358 NLVAPLVISGAGISMAGPAAQKAVLGAVTVQDIGKASGVFNMFRILGGATGIAI 411 >Cgl1114 [GEPR] COG0477 Permeases of the major facilitator superfamily Cgl Corynebacterium glutamicum Length = 449 Score = 204 bits (519), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 138/409 (33%), Positives = 213/409 (52%), Gaps = 15/409 (3%) Query: 32 ALAIGFVMAMLDVTVVNVGLSSIASSLDAPLATLVWIVDGYTLTFAAMLLVGGALADRFG 91 AL++G + +LD ++V V L I L A L VW+ Y LTFA LL+ G L DR+G Sbjct: 15 ALSVGLFLTLLDQSLVAVALPKIQEDLGASLNQAVWVSAVYLLTFAVPLLITGRLGDRYG 74 Query: 92 ARRLYLTGLLLFVLASLLCGAAPNGPFLIAARLLQGLGAAFFMPSSLSLLTHVYEDDRVR 151 R +YL G+ +F LA+L C AP+ +LIAAR +QGLG + P LS++ ++ DR R Sbjct: 75 QRNIYLAGMAVFTLAALACVFAPSIEWLIAARAVQGLGGSLLNPQPLSIIHKIFAHDR-R 133 Query: 152 ARMLGVWSATVGLAAAVGPLVGGVLIHWLGWRSVFLINVPVGLVGLLMARKLIPQVAGHA 211 GVWSA A GP++GGVL+ W+ WR+VFL+ VP+GL+ L M + +P++ Sbjct: 134 GAATGVWSAVASSAGLFGPVIGGVLVGWISWRAVFLVYVPLGLISLFMVARYVPKLPTGT 193 Query: 212 RALHLFSHLAGVVMLAALSFVLIQGPVYGWISPRILVGLAVAVLAAVALVRHELRGIAPL 271 + S +V + + L QGP GW I V LAV + AAV + + R APL Sbjct: 194 SKIDWLSGAVSLVAVLGVVLALQQGPELGW-GTLIWVSLAVGIAAAVLFIWMQTRSKAPL 252 Query: 272 LPRALFATPQFAAANGIGFLINFGVYGNLFYLALFLQQGRGADALQTGLQLVPMMAVIFF 331 +P +F T FA F + F VY + L+LQ +G + GL LVPM + Sbjct: 253 MPLRIFKTRNFAIGAFSIFSLGFTVYSVNLPIMLYLQTAQGMSSQLAGLMLVPMGIISVV 312 Query: 332 GNLMSGRMSAHWGPRV-------PLLLGLSVGAAFTAVAISFRPETPYWILALVCAAANL 384 + + GR+ P + L+ +++ A F +S P+W+L + + Sbjct: 313 MSPVIGRLVDRLAPGMISKIGFGALIFSMALMAVFMIANLS-----PWWLLIPIILFGSS 367 Query: 385 GVSTAIPAMTTVVMQVAGKAHANSAAAALNANRQIGALVGVALMGAILH 433 + P + + ++ + SA+ N +RQ+GA++G A +GA++ Sbjct: 368 NAMSFAPN-SVIALRDVPQDLVGSASGFYNTSRQVGAVLGAATLGAVMQ 415