BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0766.p         (67 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YHR020w_2 [J] COG0442 Prolyl-tRNA synthetase Sce Saccharomyces c...    28   4.8  
SPAC12B10.01c [O] COG5021 Ubiquitin-protein ligase Spo Schizosac...    28   5.2  
Rv3506 [IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ...    27   9.8  

>YHR020w_2 [J] COG0442 Prolyl-tRNA synthetase Sce Saccharomyces cerevisiae
          Length = 510

 Score = 28.1 bits (61), Expect = 4.8,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 29  KSPSGGVDGLKDPLDVVAADKGKKCFRC 56
           K+PS G   L  P D    ++G+KC +C
Sbjct: 469 KAPSMGAKSLCIPFDQPVLNEGQKCIKC 496


>SPAC12B10.01c [O] COG5021 Ubiquitin-protein ligase Spo Schizosaccharomyces pombe
          Length = 400

 Score = 28.1 bits (61), Expect = 5.2,   Method: Composition-based stats.
 Identities = 12/22 (54%), Positives = 15/22 (68%)

Query: 24  MTGTKKSPSGGVDGLKDPLDVV 45
           +TG++K P GG  GL  PL VV
Sbjct: 326 ITGSRKLPIGGFAGLNPPLTVV 347


>Rv3506 [IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
           Mtu Mycobacterium tuberculosis H37Rv
          Length = 502

 Score = 26.9 bits (58), Expect = 9.8,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 22/37 (59%)

Query: 17  ASKGNLAMTGTKKSPSGGVDGLKDPLDVVAADKGKKC 53
           +++G +A+T T  +P+G +  L   + +V  D G+ C
Sbjct: 296 STEGGVAITRTLDTPAGALGPLPGGIQIVDPDTGEPC 332