BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0737.p (442 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMa1761 [E] COG0160 4-aminobutyrate aminotransferase and related... 459 e-129 AGpA358 [E] COG0160 4-aminobutyrate aminotransferase and related... 435 e-122 mlr7169 Non COG 417 e-116 BMEII0131 [E] COG0160 4-aminobutyrate aminotransferase and relat... 403 e-112 mlr6024 Non COG 364 e-100 >SMa1761 [E] COG0160 4-aminobutyrate aminotransferase and related aminotransferases Sme Sinorhizobium meliloti Length = 438 Score = 459 bits (1182), Expect = e-129, Method: Compositional matrix adjust. Identities = 234/436 (53%), Positives = 287/436 (65%), Gaps = 2/436 (0%) Query: 7 MLALNAFNPQSGSTNSPATCALIERRRNTFGDGVPLFYRDPVHFVSASGVWLRDQEGLDY 66 M +NAF+ + A ALI RR G LFY P+H V GV+L D G Y Sbjct: 1 MSMVNAFSREDFERLDKAERALIARREKVLGPAYRLFYEKPLHLVRGEGVFLYDAAGERY 60 Query: 67 LDAYNNVPSVGHCHPHVVAAVSKQVATLNTHTRYLSNVVTSYAERLLGTFPRALSKVLFT 126 LDAYNNV SVGHCHP VV A+++Q A LNTHTRYL + YAE L TFP ALS+ +FT Sbjct: 61 LDAYNNVSSVGHCHPRVVEAITRQTAVLNTHTRYLHEGIVDYAEALTATFPEALSQAMFT 120 Query: 127 SSGTESVDLAMRLARLYTGGTGFIVTRFAYHGHSTAVAEITPAFGPGVPVGVNVRLVDAP 186 +G+E+ DLA+R+AR TGGTG I T AYHG ++AVAE +P+ G V +G +VR V AP Sbjct: 121 CTGSEANDLAVRIARFVTGGTGIIATELAYHGLTSAVAEFSPSLGESVTLGPHVRTVSAP 180 Query: 187 DGYRQD-APVGVKFAQDVATAIADLERHGIKFAGLILDTVCSSDGLFVDPPGFLKEVVAT 245 D YR + KF +DV AIADL+RHGIK A LI DT+ SSDG+F P GFLK V Sbjct: 181 DSYRHSPEEIMEKFGRDVRAAIADLKRHGIKPAMLITDTIFSSDGIFDGPRGFLKPAVDA 240 Query: 246 VKKAGGVFVADEVQPGFGRTGEGMWGFERHGIDPDIVVMGKPMGNGMPIAATVTTSDIMQ 305 + +AGG+FVADEVQPGFGRTGE MWGFERHG+ PDIV +GKPMGNG P+A V +++ Sbjct: 241 IHEAGGLFVADEVQPGFGRTGETMWGFERHGVAPDIVTIGKPMGNGYPMAGIVLRPEVIA 300 Query: 306 AFTERSGYFNTFGGNTVCCAAASAVLDVIESEGLIDNAKQTGAYLKRGLEQLKVQHQCIG 365 F R+ YFNTFGGN V AA AVLD I +EGL NA G ++ ++ L H IG Sbjct: 301 EFGPRARYFNTFGGNPVAAAAGKAVLDTIRTEGLQQNALVVGRHIMERVKSLSAIHPAIG 360 Query: 366 DVRAIGLYAAVEFVQPGT-KNGDAVMALNVVNELRKRRVLISTCGPQGNILKIRPPLQFS 424 +VR GL+ VE V T K DA + +VN LR+RR+LIS GP N+LKIRPPL FS Sbjct: 361 NVRGSGLFIGVEIVADSTIKRPDAALTTRIVNGLRERRILISASGPNANVLKIRPPLIFS 420 Query: 425 SENCDILVTAIDDTLR 440 EN D+LV A+ + L+ Sbjct: 421 RENADMLVDALGNVLK 436 >AGpA358 [E] COG0160 4-aminobutyrate aminotransferase and related aminotransferases Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 464 Score = 435 bits (1119), Expect = e-122, Method: Compositional matrix adjust. Identities = 221/437 (50%), Positives = 280/437 (64%), Gaps = 3/437 (0%) Query: 7 MLALNAFNPQSGSTNSPATCA-LIERRRNTFGDGVPLFYRDPVHFVSASGVWLRDQEGLD 65 +L LN F+ S + PA A + +R+ TFG LFY P+ VSA G +L D G Sbjct: 27 ILDLNRFD-ASRTEGFPAELAERVAKRQATFGASSVLFYEQPIEMVSAQGAYLYDAGGRK 85 Query: 66 YLDAYNNVPSVGHCHPHVVAAVSKQVATLNTHTRYLSNVVTSYAERLLGTFPRALSKVLF 125 YLD YNNVPSVGHCHP VV A+++QV LN HTRYL+ VV +Y E LL FP LS V+ Sbjct: 86 YLDVYNNVPSVGHCHPRVVEAIARQVGELNIHTRYLNRVVEAYTENLLSKFPAGLSNVVL 145 Query: 126 TSSGTESVDLAMRLARLYTGGTGFIVTRFAYHGHSTAVAEITPAFGPGVPVGVNVRLVDA 185 T +G+ES DLA+R+AR+ TG GFIVT AYHG++ V E++P+ V ++ A Sbjct: 146 TCTGSESNDLALRIARIGTGAEGFIVTEAAYHGNTALVTEVSPSSLRKRKPAAFVAIIPA 205 Query: 186 PDGYRQDAPVGVKFAQDVATAIADLERHGIKFAGLILDTVCSSDGLFVDPPGFLKEVVAT 245 P R V FA V AI +L GIKFA LI+DT+ SSDG++ DP GFLKE V Sbjct: 206 PAA-RDGMSVASNFAASVEQAINELNSRGIKFAALIVDTIFSSDGIYADPAGFLKEAVDV 264 Query: 246 VKKAGGVFVADEVQPGFGRTGEGMWGFERHGIDPDIVVMGKPMGNGMPIAATVTTSDIMQ 305 V +AGG+ +ADEVQPGFGRTG +WGFERHG+ PDIV MGKPMGNG P+ VT D++Q Sbjct: 265 VHRAGGLLIADEVQPGFGRTGGSLWGFERHGVTPDIVTMGKPMGNGFPMGGVVTRPDLLQ 324 Query: 306 AFTERSGYFNTFGGNTVCCAAASAVLDVIESEGLIDNAKQTGAYLKRGLEQLKVQHQCIG 365 F E +GYFNTFGGN V AA AVL VIE EGLI+ + G Y K+ L+ L+ +H IG Sbjct: 325 RFCEETGYFNTFGGNPVAAAAGHAVLRVIEEEGLIERSATVGGYFKQSLQALQSRHSEIG 384 Query: 366 DVRAIGLYAAVEFVQPGTKNGDAVMALNVVNELRKRRVLISTCGPQGNILKIRPPLQFSS 425 DVR GL+ ++FV P T D+ A + +N+LR +LI G G LKIRPPL FS+ Sbjct: 385 DVRGAGLFIGLDFVDPATGEPDSTRATHAINQLRHNSILIGAAGKYGATLKIRPPLCFSN 444 Query: 426 ENCDILVTAIDDTLRIR 442 E+ D+ +D L+ R Sbjct: 445 EDVDLFTGTLDIILQAR 461 >mlr7169 Non COG Length = 436 Score = 417 bits (1071), Expect = e-116, Method: Compositional matrix adjust. Identities = 210/426 (49%), Positives = 278/426 (65%), Gaps = 4/426 (0%) Query: 16 QSGSTNSPATCALIERRRNTFGDGVPLFYRDPVHFVSASGVWLRDQEGLDYLDAYNNVPS 75 Q+ + ++ + AL+ERR G FYR+P+H V SGVWL D G +LDAYNNV S Sbjct: 10 QANADSTASEQALLERRARLLGPTYRAFYRNPIHLVRGSGVWLYDATGRKFLDAYNNVAS 69 Query: 76 VGHCHPHVVAAVSKQVATLNTHTRYLSNVVTSYAERLLGTFPRALSKVLFTSSGTESVDL 135 VGHCHP VV A+S Q ATLNTHTRYLS ++ YAE+LLGT P L +FT +G+E+ DL Sbjct: 70 VGHCHPRVVEALSGQAATLNTHTRYLSEIILDYAEKLLGTVPSHLGHAMFTCTGSEANDL 129 Query: 136 AMRLARLYTGGTGFIVTRFAYHGHSTAVAEITPAF--GPGVPVGVNVRLVDAPDGYRQDA 193 A+R+A+ +GGTG I+T FAYHG + A A+++PA GVP V+ R V APD +R Sbjct: 130 AIRIAQHSSGGTGVIITDFAYHGATIATAQLSPAAVGAKGVP--VHHRTVAAPDTFRDHG 187 Query: 194 PVGVKFAQDVATAIADLERHGIKFAGLILDTVCSSDGLFVDPPGFLKEVVATVKKAGGVF 253 FA++VA AI D+ I+ A L+LD+ SSDG+F ++E V+KAGG+ Sbjct: 188 RAAKDFAKNVAAAIEDMRAQNIRPAALLLDSAFSSDGIFFPDAAVMREAGDHVRKAGGIV 247 Query: 254 VADEVQPGFGRTGEGMWGFERHGIDPDIVVMGKPMGNGMPIAATVTTSDIMQAFTERSGY 313 +ADEVQ GFGR G+GMWGF +G++PDIV MGKP+G+G P+ A + ++ +F +GY Sbjct: 248 IADEVQSGFGRLGQGMWGFANYGLEPDIVTMGKPIGDGHPMGAVLVRPRLVSSFGSNTGY 307 Query: 314 FNTFGGNTVCCAAASAVLDVIESEGLIDNAKQTGAYLKRGLEQLKVQHQCIGDVRAIGLY 373 FNTFGGN V A AVLDVIE EGLI+NA+ GAY L L+ +H +GDVR GLY Sbjct: 308 FNTFGGNPVAAAVGIAVLDVIEGEGLIENARNVGAYTADLLRALQGRHGMVGDVRHNGLY 367 Query: 374 AAVEFVQPGTKNGDAVMALNVVNELRKRRVLISTCGPQGNILKIRPPLQFSSENCDILVT 433 VE G + A +VV +R+ VLIS+CGP+GN+LKIRPPL F+ +N + L Sbjct: 368 FGVELTADGGEALAASKTSSVVEAMREDGVLISSCGPRGNVLKIRPPLPFARDNAEQLAE 427 Query: 434 AIDDTL 439 +D L Sbjct: 428 TLDRAL 433 >BMEII0131 [E] COG0160 4-aminobutyrate aminotransferase and related aminotransferases Bme Brucella melitensis Length = 443 Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust. Identities = 215/442 (48%), Positives = 279/442 (63%), Gaps = 13/442 (2%) Query: 7 MLALNAFNPQSGSTNSPATCALIERRRNTFGDGVPLFYRDPVHFVSASGVWLRDQEGLDY 66 + ++ AF P+ + S LI RR G + LFY+DPVH V GVWL D +G Y Sbjct: 3 LRSMLAFPPRRDNDMS-GNQELIARRERLLGRNMSLFYQDPVHLVKGEGVWLWDADGRKY 61 Query: 67 LDAYNNVPSVGHCHPHVVAAVSKQVATLNTHTRYLSNVVTSYAERLLGTFPRALSKVLFT 126 LD YNNVP VGHCHP VV A+ +Q +TLNTHTRYL + Y ERL TF ++L + T Sbjct: 62 LDCYNNVPHVGHCHPRVVEAICRQASTLNTHTRYLHEGILDYVERLTATFDKSLDAAILT 121 Query: 127 SSGTESVDLAMRLARLYTGGTGFIVTRFAYHGHSTAVAEITPAFGPGVPVGVNVRLVDAP 186 +G+E+ D+A+R+A+ TG TG I T F YHG++TAV++++ P G +VR V AP Sbjct: 122 CTGSEANDVALRMAQAVTGKTGIIATDFTYHGNTTAVSQLSTRMPPVGGYGGHVRHVPAP 181 Query: 187 DGYRQDAPVGVK----FAQ----DVATAIADLERHGIKFAGLILDTVCSSDGLFVDPPGF 238 D YR P+G K FAQ +V AIA L+ F+GLI+D +++G P F Sbjct: 182 DSYR---PLGGKGGEAFAQAWAAEVEKAIASLQESPFGFSGLIIDPFFANEGFPDLPENF 238 Query: 239 LKEVVATVKKAGGVFVADEVQPGFGRTGEGMWGFERHGIDPDIVVMGKPMGNGMPIAATV 298 L VA V+KAGGV +ADEVQPGFGRTG MWG ++ GI PDIV +GKPMGNG P+ A V Sbjct: 239 LAPAVAAVRKAGGVVIADEVQPGFGRTGGHMWGHQKAGIVPDIVTLGKPMGNGHPVGAVV 298 Query: 299 TTSDIMQAFTERSGYFNTFGGNTVCCAAASAVLDVIESEGLIDNAKQTGAYLKRGLEQLK 358 +D + AF + YFNTFGGN V CAAA AVLDV+E E L NA + GAY ++GLE+L Sbjct: 299 AGADTLNAFRKAFRYFNTFGGNPVSCAAAMAVLDVLEEEKLQANALEVGAYARQGLEKLA 358 Query: 359 VQHQCIGDVRAIGLYAAVEFV-QPGTKNGDAVMALNVVNELRKRRVLISTCGPQGNILKI 417 +H IG+VR GL+ E V K A MA VVNE+R+R VL++ G N KI Sbjct: 359 QKHGMIGNVRGSGLFFGAELVLDRAEKTPAAEMATRVVNEMRERGVLMNKLGIHQNATKI 418 Query: 418 RPPLQFSSENCDILVTAIDDTL 439 RPP+ FS EN D++++ +DD L Sbjct: 419 RPPMPFSRENADLMLSTLDDVL 440 >mlr6024 Non COG Length = 429 Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust. Identities = 188/406 (46%), Positives = 254/406 (62%), Gaps = 7/406 (1%) Query: 28 LIERRRNTFGDGVPLFYRDPVHFVSASGVWLRDQEGLDYLDAYNNVPSVGHCHPHVVAAV 87 +I RR G G PV FVS+ G L D +G DYLDA+NNV VGH H HV AV Sbjct: 11 IIRRRNMVLGPGYQFSETIPVEFVSSFGAHLIDSDGNDYLDAFNNVQGVGHAHRHVADAV 70 Query: 88 SKQVATLNTHTRYLSNVVTSYAERLLGTFPRALSKVLFTSSGTESVDLAMRLARLYTGGT 147 ++Q+A +NT TRY + +YAERLL TFP LSK+ +G+E+ DLA+R+AR +TGG Sbjct: 71 ARQIAAINTDTRYPQEALVAYAERLLATFPAELSKLSLPCTGSEANDLAVRVARYHTGGE 130 Query: 148 GFIVTRFAYHGHSTAVAEITPAFGPGVPVGVNVRLVDAPD----GYRQDAPVGVKFAQDV 203 G IVTR+A+HG + VA +P G G P+G NVRL+ APD G +Q ++ V Sbjct: 131 GIIVTRWAFHGRTREVASFSPMLGAGSPLGPNVRLIAAPDPRFCGPQQSLENYMR--DQV 188 Query: 204 ATAIADLERHGIKFAGLILDTVCSSDGLFVDPPGFLKEVVATVKKAGGVFVADEVQPGFG 263 +AI DLERHG + A L+ D+ +SDG+F P GFL+ +V V AGG+ +ADEVQ GF Sbjct: 189 RSAIVDLERHGYRLAALVADSAFTSDGIFTHPVGFLQAMVDEVHAAGGLHIADEVQSGFA 248 Query: 264 RTGEGMWGFERHGIDPDIVVMGKPMGNGMPIAATVTTSDIMQAFTERSGYFNTFGGNTVC 323 + G+ MWGF RHG+ PDIV MGK +GNG PI+ V ++ F ++ YFNT GG ++ Sbjct: 249 QLGDSMWGFSRHGVVPDIVTMGKAIGNGFPISGVVFRPEVSDEFGQKVSYFNTLGGRSLS 308 Query: 324 CAAASAVLDVIESEGLIDNAKQTGAYLKRGLEQLKVQHQCIGDVRAIGLYAAVEFVQP-G 382 AAASAVLDV E E + + GA L+ GLE L + + ++R GLY VE V+ Sbjct: 309 IAAASAVLDVFEQENVRERVAVNGAALQSGLETLARESPYVAEIRGSGLYLGVEIVKDRE 368 Query: 383 TKNGDAVMALNVVNELRKRRVLISTCGPQGNILKIRPPLQFSSENC 428 T D + +++ +LR RRVLIS G GN+LK+RPP+ F++ + Sbjct: 369 TLEPDPIRCESIIKDLRDRRVLISRTGSSGNVLKVRPPVAFTAADV 414