BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0712.p         (166 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2545 [S] COG2606 Uncharacterized conserved protein Rso Ralsto...   247   1e-65
NMA1462 [S] COG2606 Uncharacterized conserved protein NmA Neisse...   186   2e-47
NMB1026 [S] COG2606 Uncharacterized conserved protein Nme Neisse...   186   3e-47
AGc472 [S] COG2606 Uncharacterized conserved protein Atu Agrobac...   100   1e-21
CC0963 Non COG                                                         90   2e-18

>RSc2545 [S] COG2606 Uncharacterized conserved protein Rso Ralstonia
           solanacearum
          Length = 163

 Score =  247 bits (630), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 113/159 (71%), Positives = 135/159 (84%)

Query: 3   AKKEHISETPATQFLRKQGVAFSEYPYAYEEHGGTAVSARELGVDEHVVIKTLVMQDEAS 62
           +K  H+SETPATQFL+  G+A++E+ Y Y +HGGT  S+R+LGVDEH VIKTLVM+DE +
Sbjct: 2   SKPRHVSETPATQFLKAHGIAYTEHAYDYVDHGGTTESSRQLGVDEHHVIKTLVMEDEQA 61

Query: 63  KPLLVLMHGDCKVSTKNLARQIGCKSVEPCKPEVANRHSGYLIGGTSPFGTRKTMPVYVE 122
           KPL+VLMHGDC VSTKNLARQ G KSV+PCKPEVA RHSGY +GGTSPFG RK MPVYVE
Sbjct: 62  KPLIVLMHGDCSVSTKNLARQAGRKSVQPCKPEVAQRHSGYQVGGTSPFGVRKAMPVYVE 121

Query: 123 ASILELDKIYINGGRRGFLVGIDPAVILKVLPAKPVQCA 161
           AS+L L++IYINGGRRGFLV + PAV+  +L A+PVQCA
Sbjct: 122 ASVLALERIYINGGRRGFLVSLAPAVLTTLLHAQPVQCA 160


>NMA1462 [S] COG2606 Uncharacterized conserved protein NmA Neisseria
           meningitidis Z2491
          Length = 159

 Score =  186 bits (473), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 84/152 (55%), Positives = 113/152 (74%), Gaps = 1/152 (0%)

Query: 11  TPATQFLRKQGVAFSEYPYAYEEHGGTAVSARELGVDEHVVIKTLVMQDEASKPLLVLMH 70
           TPA + LR+ G+ F  + YAYEEHGGTA  AR  G DEH+VIKT+V+QDE  K L+VLMH
Sbjct: 9   TPAVRVLRENGIEFEPFTYAYEEHGGTAQFARLFGKDEHLVIKTIVLQDENGKGLIVLMH 68

Query: 71  GDCKVSTKNLARQIGCKSVEPCKPEVANRHSGYLIGGTSPFGTRKTMPVYVEASILELDK 130
           GD ++ST+NLAR +G K +EP  P  AN+ +GYL+GGT+PFG R  + +YVE S+++L+ 
Sbjct: 69  GDKQISTRNLARHLGAKHIEPATPAQANKWTGYLVGGTTPFGIRTKLDIYVEQSVMDLET 128

Query: 131 IYINGGRRGFLVGIDPAVILKVLPAKPVQCAL 162
           IYINGG+RGF++GI P   L +L  K +Q A+
Sbjct: 129 IYINGGKRGFIIGIRPGD-LNILNPKTIQAAV 159


>NMB1026 [S] COG2606 Uncharacterized conserved protein Nme Neisseria
           meningitidis MC58
          Length = 159

 Score =  186 bits (471), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 84/152 (55%), Positives = 113/152 (74%), Gaps = 1/152 (0%)

Query: 11  TPATQFLRKQGVAFSEYPYAYEEHGGTAVSARELGVDEHVVIKTLVMQDEASKPLLVLMH 70
           TPA + LR+ G+ F  + YAYEEHGGTA  AR  G DEH+VIKT+V+QDE  K L+VLMH
Sbjct: 9   TPAVRVLRENGIEFEPFTYAYEEHGGTAQFARLFGKDEHLVIKTIVLQDENGKGLIVLMH 68

Query: 71  GDCKVSTKNLARQIGCKSVEPCKPEVANRHSGYLIGGTSPFGTRKTMPVYVEASILELDK 130
           GD ++ST+NLAR +G K +EP  P  AN+ +GYL+GGT+PFG R  + +YVE S+++L+ 
Sbjct: 69  GDKQISTRNLARHLGAKHIEPATPVQANKWTGYLVGGTTPFGIRTKLDIYVEQSVMDLET 128

Query: 131 IYINGGRRGFLVGIDPAVILKVLPAKPVQCAL 162
           IYINGG+RGF++GI P   L +L  K +Q A+
Sbjct: 129 IYINGGKRGFIIGIRPGD-LNILNPKTIQAAV 159


>AGc472 [S] COG2606 Uncharacterized conserved protein Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 158

 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 83/147 (56%), Gaps = 3/147 (2%)

Query: 11  TPATQFLRKQGVAFSEYPYAYEEHGGTA--VSARELGVDEHVVIKTLVMQDEASKPLLVL 68
           T ATQ L K G+AF+   Y Y+ +       +A  +G   H+V+KTL M +   KP+ V+
Sbjct: 5   TRATQMLTKAGIAFATVTYDYDPNADRIGLQAAEAIGEAPHLVLKTL-MAELDGKPVCVV 63

Query: 69  MHGDCKVSTKNLARQIGCKSVEPCKPEVANRHSGYLIGGTSPFGTRKTMPVYVEASILEL 128
           +  D +VS K LA   G KS    KP  A R +GY +GG SPFG +K +P  +EA  +  
Sbjct: 64  VPSDREVSMKKLAAAFGGKSANMMKPADAERATGYHVGGISPFGQKKQVPTAIEADAMVH 123

Query: 129 DKIYINGGRRGFLVGIDPAVILKVLPA 155
           D +Y+NGG+RG  V + P    KVL A
Sbjct: 124 DYVYMNGGQRGLQVRLSPRDAQKVLDA 150


>CC0963 Non COG
          Length = 158

 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/157 (41%), Positives = 85/157 (54%), Gaps = 9/157 (5%)

Query: 11  TPATQFLRKQGVAFSEYPYAYE---EHGGTAVSARELGVDEHVVIKTL-VMQDEASKPLL 66
           TPAT  L K GVAF  Y Y Y+   E  G   +A  LG D   V+KTL VM D   KP  
Sbjct: 5   TPATIALTKAGVAFDLYTYDYDPGSERVGLQ-AAEALGEDPRRVLKTLIVMLD--GKPAC 61

Query: 67  VLMHGDCKVSTKNLARQIGCKSVEPCKPEVANRHSGYLIGGTSPFGTRKTMPVYVEASIL 126
            ++  D +VS K LA  +  KS        A R +GY +GG SPFG +K +P  +EA+ L
Sbjct: 62  AILPSDQEVSMKKLAAALKGKSAAMAPVPDAERITGYKVGGVSPFGQKKRLPTVLEAAAL 121

Query: 127 ELDKIYINGGRRGFLVGIDPAVILKVLPAKPVQCALV 163
               +++NGG+RG  V + PA  +K L A  V  A+V
Sbjct: 122 AEPYVFLNGGQRGLQVKLAPADAVKALGA--VTAAIV 156