BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0676.p (703 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BMEII0297 [P] COG1629 Outer membrane receptor proteins, mostly F... 91 9e-18 PA3790 [P] COG1629 Outer membrane receptor proteins, mostly Fe t... 84 1e-15 aq_529 [P] COG1629 Outer membrane receptor proteins, mostly Fe t... 77 2e-13 YPO0164 [P] COG1629 Outer membrane receptor proteins, mostly Fe ... 73 2e-12 AGl930 [P] COG1629 Outer membrane receptor proteins, mostly Fe t... 48 1e-04 >BMEII0297 [P] COG1629 Outer membrane receptor proteins, mostly Fe transport Bme Brucella melitensis Length = 649 Score = 90.9 bits (224), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 157/695 (22%), Positives = 262/695 (37%), Gaps = 144/695 (20%) Query: 20 VLARTDDETPLPAITVSSDKPSALPPSADSAALLNDQPGYATAAGGGVSALPVLNGFAAD 79 V+ TP +T P P++ A L PG++T GG + V G Sbjct: 23 VITSAPQSTPFKVVT-DPKAPRQPVPASGGADYLKTIPGFSTIRNGGTNGDLVFRGMFGS 81 Query: 80 RLKIRLDGMEVTAACGNQMNAPMSYMPPAQVGMTRVIAGITPVSVGGDSIGGSIELSSPA 139 R+ IR DG + ACG +M+ P SY+ P VI G V G ++ Sbjct: 82 RVNIRTDGGVILGACGGRMDNPTSYISPESYDRMSVIKGPQTVQWGPAGSAATVLFERDP 141 Query: 140 PQFASAPGQLLTKGGFAVSARSVNAEVSASLNATVASDSLSVAYVASQSRAESYVNGNGD 199 F +L KG ++ S N A ++ATV + +A++SRA Y +G+G+ Sbjct: 142 QHFD----KLTLKGDSSILFGS-NGRFDARVDATVGDKPGYIRMMANKSRANDYKDGDGN 196 Query: 200 KVLSSLYQSNNH---ALTVAARGEGQQLVLKV----GQQYIPYQG-------FPNEYMDM 245 +V S + N LT A VL++ G Y G F + + Sbjct: 197 RVPSKWDKWNTDLYLGLTPDA-----DTVLEISGGLGDGEARYAGRAMDGSQFERQSFGL 251 Query: 246 TGNRSTFANLGYERRFDWGKLFGRLYWQRTEHEMGFFSGERSGTMPMQTQ--GRDLG--- 300 ++S ++ K+ +LY+ +H M F MPM+++ R +G Sbjct: 252 KFSKSNVSDY-------LEKIEAQLYYNYADHIMDNFRLRPPQKMPMESEVDRRSMGGRV 304 Query: 301 --------YTLRADIDLAPEGRSVLRVGHEYHSFHLDDVWPPVPGSMMMGPRPYLNINDG 352 + L A +D + G E + L D W + D Sbjct: 305 STTWNFDEHRLVAGLDFQTD----THRGKEKVNMQLTDNW----------------LKDA 344 Query: 353 KRDRLALFAEWEQQLDARWSTLVGVRDEL--VKSDAGNVQSYGTNMMNQPDLRAANAFNA 410 + +F EW + G R + V+ D + +YG D R AF+ Sbjct: 345 QFANYGVFGEWTWNFADNQRLVAGGRIDRASVEDDRASSLTYG-------DKRNQAAFSG 397 Query: 411 RGHAKTDNNIDLTALARWTPDAGKTYEFGYARKTRSPNLYERYTWGRGTMAMTMTNWFGD 470 + D W+ +Y G R P+ +E ++ +G + Sbjct: 398 FIRHEQD----------WSSLPVNSY-IGLGYVNRFPDYWELFS-PKGVTGSAL------ 439 Query: 471 GNGYVGNIDLKPEVAHTFSGSADWHSQDSEGGQHRWFFKMTPYFSYVENYIDADVIGRFN 530 N + G I+ + V D+ +Q SEG W + YF + ++I D N Sbjct: 440 -NAFEG-IESEKTV------QVDFGAQYSEGDTDIW---ASGYFGVINDFILFDYS---N 485 Query: 531 P-YSVST-ASARLL--------QFANHDARLYGINASWKWPLAVASGLGEVSFTGKAGIT 580 P SV+T +AR++ QFAN+ WK ++A G+ + + Sbjct: 486 PGGSVATNVNARIMGAELGVSRQFANY----------WKAEASIAYAWGQNTTYDEP--- 532 Query: 581 RGKRVDGGNLYHMMPFHVLAALEHKQGPWTQRAEMNYVARKSQVDSNRVEPV------TA 634 L + P L +++ W+ A VA ++++ N V +A Sbjct: 533 ---------LPQIPPLEGRLGLTYERDNWSVGALWRLVAAQTRIAENMGNVVGKDFDKSA 583 Query: 635 SYTVFNLRSSYRFNTAISVTAGISNLFNRNYAEPL 669 + VF++ +YRFN ++ ++ G+ NLFN+ Y E L Sbjct: 584 GFGVFSVNGTYRFNESVRLSLGVDNLFNKEYTEHL 618 >PA3790 [P] COG1629 Outer membrane receptor proteins, mostly Fe transport Pae Pseudomonas aeruginosa Length = 723 Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 160/742 (21%), Positives = 287/742 (38%), Gaps = 128/742 (17%) Query: 9 AIALAFTVCSDVLARTDDETPLPAITVSSDKPSALPPSADSAALLNDQPGYATAAGGGVS 68 A+ LA +V + V +PL +T + +P P++D A L PG+A GG + Sbjct: 63 AVELAPSVVTGVA----QSSPLTIVT-NPKEPRQPVPASDGADYLKTIPGFAVIRNGGSN 117 Query: 69 ALPVLNGFAADRLKIRLDGMEVTAACGNQMNAPMSYMPPAQVGMTRVIAGITPVSVGGDS 128 PVL G RL I +G + AC N+M+AP SY+ P VI G V G + Sbjct: 118 GDPVLRGMFGSRLNILTNGGMMLGACPNRMDAPTSYISPETYDKLTVIKGPQTVLWGPGA 177 Query: 129 IGGSIELSSPAPQFASAPGQLLTKGGFAVSARSVNAEVSASLNATVASDSLSVAYVASQS 188 G+I +F G+L ++ ++ A S N L+A + + + + + Sbjct: 178 SAGTILFEREPERF----GELGSRVNASLLAGS-NGRFDKVLDAAAGNRLGYLRFTGNHA 232 Query: 189 RAESYVNG------------NGDKVLSSLYQSNNHALTVAARGEGQQLVLKVGQQYIPYQ 236 +++ Y +G NGD + + A +G+G+ G + Sbjct: 233 QSDDYEDGAGNTVPSRWKKWNGDVAVGWTPDEDTLIELTAGKGDGEARYAGRG---MDGS 289 Query: 237 GFPNEYMDMTGNRSTFANLGYERRFDWGKLFGRLYWQRTEHEMGFF---SGERSGTMPM- 292 F E + + +S +++ K+ ++Y+ +H M F + + S MPM Sbjct: 290 QFKRESLGLRFVKSNVSDV-------LEKVEAQVYYNYADHIMDNFRLRTPDPSSMMPMP 342 Query: 293 -------QTQGRDLGYTLRADIDLAPEGRSVLRVGHEYHSFHLDDVWPPVPGSMMMGPRP 345 +T G L T R D G +R H D M Sbjct: 343 MASQVDRRTLGGRLAATWRWDDFKLVTGVDAMRNEHRARGSKYD-----------MMTDY 391 Query: 346 YLNINDGKRDRLALFAEWEQQLDARWSTLVGVRDELV---KSDAGNVQSYGTNMMNQPDL 402 Y + + + A+F + + W RD L+ + D +V+ Y + L Sbjct: 392 YTDADQFPWSKDAVFHNYGAFGELTW--FAAERDRLIGGLRLDRASVKDY------RQTL 443 Query: 403 RAANAFNARGH-AKTDNNIDL--TALARWT---PDAGKTYEFGYARKTRSPNLYERYTWG 456 ++ + +A + D D + R+ D+ T G R P+ +E ++ Sbjct: 444 KSGHMGHAMANPTANDTRADTLPSGFVRYEHDLADSPTTLYAGLGHAERFPDYWELFSPK 503 Query: 457 RGTMAMTMTNWFGDGNGYVGNID-LKPEVAHTFSGSADWHSQDSEGGQHRWFFKMTPYFS 515 RG NG V D +KPE D+ Q + W + Y Sbjct: 504 RGP------------NGSVNAFDKIKPEKTTQL----DFGLQYNGDKLQAW---ASGYVG 544 Query: 516 YVENYIDADVIGRFNPYSVSTASARLLQFANHDARL--------YGINASWKWPLAVASG 567 V+++I + + + +++ Q N DAR+ Y + +WK ++A Sbjct: 545 VVQDFI----LFSYREGMMGSST----QATNVDARIMGGELGASYQLTGNWKTDASLAYA 596 Query: 568 LGEVSFTGKAGITRGKRVDGGNLYHMMPFHVLAALEHKQGPWTQRAEMNYVARKSQVDSN 627 G+ S +A L + P L +++G W+ + VA ++++ + Sbjct: 597 WGKNSSDDRA------------LPQIPPLEARFGLTYEEGDWSAGSLWRVVAPQNRIARD 644 Query: 628 RVEPV------TASYTVFNLRSSYRFNTAISVTAGISNLFNRNYAEPLGGVYLSGLASSR 681 + V +A + VF+L +YR + ++AG+ NLF+++Y E L +G S Sbjct: 645 QGNVVGKDFDKSAGFGVFSLNGAYRVTRNVKLSAGVDNLFDKDYTEHLNKAGDAGFGFSA 704 Query: 682 SGSLQALPGYGRSLDVGVNVSF 703 + + +P GR+ V+ SF Sbjct: 705 N---ETVPEPGRTFWTKVDFSF 723 >aq_529 [P] COG1629 Outer membrane receptor proteins, mostly Fe transport Aae Aquifex aeolicus Length = 680 Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 155/685 (22%), Positives = 251/685 (36%), Gaps = 113/685 (16%) Query: 34 TVSSDKPSALPPSADSAALLNDQPGYATAAGGGVSALPVLNGFAADRLKIRLDGMEVTAA 93 ++ D LP AL + PG G ++ V+ GF D + DG V A Sbjct: 32 VLTEDVVRELPAKDVGEALEYNIPGVWKVRKGAIANDVVIRGFKKDEVNQLFDGARVYNA 91 Query: 94 CGNQMNAPMSYMPPAQVGMTRVIAGITPVSVGGDSIGGSIELSSPAPQFASAPGQLLTKG 153 C N+M+ + ++ ++V VI G V G ++GG++ + + P+ G++ T Sbjct: 92 CPNRMDPGIFHVDFSEVESVEVIKGPFDVRNYG-AVGGTVNVKTKEPK-EGMEGRITT-- 147 Query: 154 GFAVSARSVNAEVSASLNATVASDSLSVAYVASQSRAESYVNGNGDKVLSSLYQSNN--- 210 +A + ++N S + D LS + + Y +G G K+ + +Y S N Sbjct: 148 -YADNWSTINP----SFYFSYGKDRLSFLIGYAFRFGKPYEDGKGRKI-TEIYPSGNPSA 201 Query: 211 -------------HALTVAAR---GEGQQLVLKVGQQYIPYQGFPNEYMDMTGNRSTFAN 254 H R +G + L Q +P MD + N Sbjct: 202 YSQDERDSTAFNIHTAWAKLRYKITDGVKFKLDYAHQRATDVLYPYLMMDGIYDEVDRVN 261 Query: 255 LGYERRFDWGKLF-GRLYWQRTEHEMGFFSGERSGTMPMQ--TQGRDLGYTLRADIDLAP 311 LG E GK F +LY H M T P + +Q GYT+ Sbjct: 262 LGLE-----GKRFKAQLYGSSVRHWM---------TNPKRVISQNAPRGYTMGT-----Y 302 Query: 312 EGRSVLRVGHEY----HSFHLDDV---WPPVPGSMM--MGP-RPYLNINDGKRDRLALFA 361 V EY SF +D W M MG R I D L+ Sbjct: 303 AKSKVYGFKGEYSFGDFSFGIDTFYRYWKAQTTMYMRNMGMYRTQNTIPDVDVYNFGLYG 362 Query: 362 EWEQQLDARWSTLVGVRDELVKSDA----GNVQSYGTNMMNQPDLRAANAF---NARGHA 414 E+ ++L + + G+R + K+ A N+ Y + N D + + N + Sbjct: 363 EYRKKLSPKLRLVAGLRLDWSKTKADSGKANINLY-RHYHNTTDTSQTDVYPSGNVQVFY 421 Query: 415 KTDNNIDLTALARWTPDAGKTYEFGYARKTRSPNLYERY-TWGR-GTMAMTMTNWFGDGN 472 + I+L A G R P+ ERY R G M TM +W Sbjct: 422 ELKEGIELFA--------------GLGSAVRVPDPQERYFALDRMGKMENTMGDW----- 462 Query: 473 GYVGNIDLKPEVAHTFSGSADWHSQDSEGGQHRWFFKMTPYFSYVENYIDADVIGRFNPY 532 VGN L PE + + G ++ + SYV++YI + Sbjct: 463 --VGNPKLDPERNNELDLGIKLTGERYSG-------ELRTFLSYVKDYIYVYRATAPSSG 513 Query: 533 SVSTASARLLQFANHDARLYGINASWKWPLAVASGLGEVSFTGKAGITRGKRVD------ 586 ++ + + + + N DA YG S + + + F G TRG++ D Sbjct: 514 NMMNQNTKAMSYTNIDAYFYGFELSGSYAIT-----DTIFFDGNVAYTRGRKDDTYPAKN 568 Query: 587 --GGNLYHMMPFHVLAALEHKQGPWTQRAEMNYVARKSQVDSNRVEPVTASYTVFNLRSS 644 ++ + P AL + G + + E A + VDS+ E T+ Y + NL+ Sbjct: 569 ITDKDIAEIPPLTARLALRYDTGMYFGQVEGVLAATQDNVDSDLQEEKTSGYGIINLKGG 628 Query: 645 YRFNTAISVTAGISNLFNRNYAEPL 669 + + V AGI+NLF++ Y L Sbjct: 629 VNYRN-LRVVAGINNLFDKLYYTHL 652 >YPO0164 [P] COG1629 Outer membrane receptor proteins, mostly Fe transport Ype Yersinia pestis Length = 686 Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 6/174 (3%) Query: 31 PAITVSSDKPSALP-PSADSAALLNDQPGYATAAGGGVSALPVLNGFAADRLKIRLDGME 89 P + V+S K P P++D L PG++ GG + V G RLKI DG E Sbjct: 76 PLVVVTSPKVPRQPVPASDGTDYLRTIPGFSLVRNGGTNGDVVFRGMFGSRLKILTDGAE 135 Query: 90 VTAACGNQMNAPMSYMPPAQVGMTRVIAGITPVSVGGDSIGGSIELSSPAPQFASAPGQL 149 + C ++M+AP SY+ P + V+ G V G G+I P F Q Sbjct: 136 ILGTCPSRMDAPTSYISPESFDLLTVVKGPQSVLWGPGVSAGTILFERERPHF----DQS 191 Query: 150 LTKGGFAVSARSVNAEVSASLNATVASDSLSVAYVASQSRAESYVNGNGDKVLS 203 KG +V A S N +L+A++ ++ + + +QSRA Y +GN +V S Sbjct: 192 GVKGNASVLAGS-NGRWDKNLDASLGNEQGYLRMMGNQSRAADYKDGNNVRVPS 244 Score = 39.7 bits (91), Expect = 0.025, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 78/195 (40%), Gaps = 32/195 (16%) Query: 526 IGRFNPYSV---STASARLLQFANHDARL--------YGINASWKWPLAVASGLGEVSFT 574 IGR N + + + R+ Q N +A + Y + WK ++A GE Sbjct: 507 IGRVNDFILFKYDPKNLRISQADNINATIMGGEMGMEYALTPYWKADASLAYAWGEN--- 563 Query: 575 GKAGITRGKRVDGGNLYHMMPFHVLAALEHKQGPWTQRAEMNYVARKSQVDSNRVEPV-- 632 TR R L + P L + G W+ A V + +V N V Sbjct: 564 -----TRDNRP----LPQIPPLEARLGLTFEAGDWSSSALWRLVNSQHRVAINEGNVVGK 614 Query: 633 ----TASYTVFNLRSSYRFNTAISVTAGISNLFNRNYAEPLGGVYLSGLASSRSGSLQAL 688 +A + V + +Y+ N + +++GI NL N+ Y+E L SG S + L Sbjct: 615 DFSSSAGFGVLSANVAYKVNKQVKLSSGIDNLLNKAYSEHLNLAGNSGFGYSVNTPLNE- 673 Query: 689 PGYGRSLDVGVNVSF 703 GR+L +N++F Sbjct: 674 --PGRTLWAKLNLTF 686 >AGl930 [P] COG1629 Outer membrane receptor proteins, mostly Fe transport Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 717 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 63/232 (27%), Positives = 94/232 (40%), Gaps = 35/232 (15%) Query: 479 DLKPEVAHTFSGSADWHSQDSEGGQHRWFFKMTPYFSYVENYIDADVIGRFNPYSVSTAS 538 DLK + A T W G + W T Y+S+VEN + S+ +S Sbjct: 514 DLKAQTATTVE--IGWR-----GERGSWNIDATAYYSWVENEL----------LSLRDSS 556 Query: 539 ARLLQFANHDARLYGINASWKWPLA--VASGL-GEVSFTGKAGITRGKRVDGGNLYHMMP 595 LL N D ++A ++ ++ V GL +++ + + R V G N P Sbjct: 557 GSLLSAFNADET---VHAGLEFGVSGEVLDGLTARLAYVLQDFLFRDDPVRGDNRLAGAP 613 Query: 596 FHV--LAALEHKQGPWTQRAEMNYVARKSQVDSNRVEPVTASYTVFNLRSSYRFNTAISV 653 V LA W A + +V K+ VD N Y V +LR+ YR N SV Sbjct: 614 RQVVNLAVQYALFEQWDIGAVLQWVPSKTPVD-NMNTLYADPYAVVDLRTEYRVNDRFSV 672 Query: 654 TAGISNLFNRNYAEPLGGVYLSGLASSRSGSLQA--LPGYGRSLDVGVNVSF 703 ++N+F++ YA S L + + QA LPG GR G+ F Sbjct: 673 YGAVTNVFDKTYAS-------STLILDEASAGQAVYLPGDGRGFYAGIKARF 717 Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust. Identities = 37/150 (24%), Positives = 61/150 (40%), Gaps = 20/150 (13%) Query: 54 NDQPGYATAAGGGVSALPVLNGFAADRLKIRLDGMEVTAACGNQMNAPMSYMPPAQVGMT 113 NDQP G G+ PV G + + DG+ + A G+ + + P Q + Sbjct: 99 NDQP-RIQIRGSGLQQNPVERG-----VLVLKDGLPINRADGSYI---VGLANPGQASLI 149 Query: 114 RVIAGITPVSVGGDSIGGSIELSSPAPQFASAPGQLLTKGGFAVSARSVNAEVSASLNAT 173 + G T +G +GG+I +SP + G ++ GG + + ASL Sbjct: 150 EIYRGYTANRLGASVLGGAINFASPVEK-----GTSISAGGGSF------GQADASLRTG 198 Query: 174 VASDSLSVAYVASQSRAESYVNGNGDKVLS 203 +D + + A SR + Y N + LS Sbjct: 199 FDADRFAAGFYADASRRDGYRVYNESRRLS 228