BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0672.p (531 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSp1051_2 [T] COG2202 FOG Rso Ralstonia solanacearum 205 2e-52 CC3094_4 [T] COG2200 FOG Ccr Caulobacter vibrioides 202 2e-51 AGl2664_2 [T] COG2200 FOG Atu Agrobacterium tumefaciens strain C... 196 1e-49 RSp1051_1 [T] COG2200 FOG Rso Ralstonia solanacearum 192 1e-48 CC0091_3 [T] COG2200 FOG Ccr Caulobacter vibrioides 192 2e-48 >RSp1051_2 [T] COG2202 FOG Rso Ralstonia solanacearum Length = 253 Score = 205 bits (522), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 118/256 (46%), Positives = 154/256 (60%), Gaps = 11/256 (4%) Query: 276 LYRSAPVGLCFLDPLLRVVSANAMMIDLLGGNADSELEGSPVIRLLD----RSEHRPLLQ 331 LYR APV LCF+D R VSAN +++L A S+ G RL D ++ R L Sbjct: 1 LYRHAPVALCFVDGAERCVSANNRFLEILA-CAGSQFIGR---RLADMACCKARLRGLQA 56 Query: 332 MLAQVVDGASAAPMEFFNSRTGRTSLLAF-QLVRSDLGELLGISGSAVDITARVAAERTV 390 + + G S AP+E G T LAF Q V ++GE +G S +D+T + AER + Sbjct: 57 AVRDIAQGRSPAPVEIEGQ--GETCYLAFVQPVHDEVGERIGTSIIMIDVTEQRRAERAI 114 Query: 391 RDSEEHFHRAIDLSPNIPWAADEQGVVDYIGPTFEWQPELNIVQRHRQWVACIPEDDRQR 450 R+SEEHF A +LSP+I WAA G V+Y+GPTF +++ R W + +D R Sbjct: 115 RESEEHFRCASELSPDIAWAARPDGTVNYMGPTFGAARNMSVEDRIEAWYGTLHPEDGVR 174 Query: 451 VRQEWLDNLPSGRPFSTEFRVLWPDGQWRWMRSRASPHADAEGRILRWYGLIVDISVERA 510 VRQEWL LPSG+PF T FR+ WPDG W W+ SRA PH A+G I RWYGLIVDI+ +A Sbjct: 175 VRQEWLAWLPSGQPFETTFRIKWPDGSWHWVSSRARPHHGADGAIDRWYGLIVDITGRKA 234 Query: 511 LQQRIALLEQQLQPSR 526 L+ RIA+LE+QL R Sbjct: 235 LEHRIAVLERQLDGYR 250 >CC3094_4 [T] COG2200 FOG Ccr Caulobacter vibrioides Length = 283 Score = 202 bits (513), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 104/230 (45%), Positives = 145/230 (63%) Query: 24 QPLIHLRTGRIAGFEMLARWSCPQRGVVSPVDFITVAEDAGLLDTLLLQLLDTVADSLRH 83 QPL HL R+ G E L RW P+RG+VSP DFI +AE+ GL+ L +L + Sbjct: 7 QPLYHLGDERVTGCEALLRWRHPERGMVSPADFIPLAEEIGLIVQLGEWVLRRACAEAAN 66 Query: 84 WPADLRLAINLSPRQFLDTSLLERLSTVMHAHGLPLSRLQLEITESSLVQDHERTLQTIR 143 WP +RLA+NLSP QF D L+ + + + A GLP RL+LEITES L+QD + + + Sbjct: 67 WPEHVRLAVNLSPAQFRDRGLVRTVVSALAASGLPAQRLELEITESVLLQDSQANMTMLH 126 Query: 144 AARQAGASLSLDDFGTGYSSLTRLQSYPFDEIKIDASFVRTMDQDPDSFRIVLAVAGLGQ 203 + G +S+DDFGTGYSSL+ L+S+PFD+IKID +FVR + D D+ I+ AV LG Sbjct: 127 DLKALGVRISMDDFGTGYSSLSYLRSFPFDKIKIDQTFVRDILHDSDAMAIIKAVLDLGA 186 Query: 204 SLKMHVVAEGVETSHHAHLLKRMGCEFGQGFHLGRPAPLAEAARLIEQQG 253 S+ + AEGVET L++ GC QG+ + RPAP +E A+++ +G Sbjct: 187 SMGVVTTAEGVETQAQLDALRQQGCAEIQGYFISRPAPASEIAKMLGVEG 236 >AGl2664_2 [T] COG2200 FOG Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 262 Score = 196 bits (498), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 98/236 (41%), Positives = 145/236 (61%) Query: 9 DIRTALDAGHLWPALQPLIHLRTGRIAGFEMLARWSCPQRGVVSPVDFITVAEDAGLLDT 68 D++TAL + QP + +T ++ GFE L RW P RG V P FI VAE GL+ + Sbjct: 20 DLQTALQNDEMEVYYQPQVATQTRKLCGFEALLRWKHPVRGDVPPSVFIPVAERTGLIHS 79 Query: 69 LLLQLLDTVADSLRHWPADLRLAINLSPRQFLDTSLLERLSTVMHAHGLPLSRLQLEITE 128 L +++T W D+++A+NLSP QF T+L++ + + GL SRL+LEITE Sbjct: 80 LGKWVMETACREAMGWDEDMKVAVNLSPVQFHSTNLIQNVMGALEKSGLEPSRLELEITE 139 Query: 129 SSLVQDHERTLQTIRAARQAGASLSLDDFGTGYSSLTRLQSYPFDEIKIDASFVRTMDQD 188 S L+ ++T+ T+ + G +++DDFGTGYSSL L+ PFD+IKID SF+R + D Sbjct: 140 SILLNKSDQTINTLSRLKAVGIKIAMDDFGTGYSSLANLRGVPFDKIKIDRSFLRDITSD 199 Query: 189 PDSFRIVLAVAGLGQSLKMHVVAEGVETSHHAHLLKRMGCEFGQGFHLGRPAPLAE 244 D+ IV V G+G+SL+M +AEG+ET ++R+GC+ QG+ + RP P E Sbjct: 200 RDALAIVEFVVGVGRSLRMTTIAEGIETEEQYECVRRLGCDQVQGYLISRPLPAKE 255 >RSp1051_1 [T] COG2200 FOG Rso Ralstonia solanacearum Length = 278 Score = 192 bits (488), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 117/274 (42%), Positives = 160/274 (58%), Gaps = 1/274 (0%) Query: 3 APIAADDIRTALDAGHLWPALQPLIHLRTGRIAGFEMLARWSCPQRGVVSPVDFITVAED 62 A I + + AL + PA Q L+ LR + GFE+L+RW+ G V P FI VAE Sbjct: 5 ASITRERLLDALARDAIEPAFQCLVDLRDHDLKGFEVLSRWTEADLGEVPPTVFIPVAER 64 Query: 63 AGLLDTLLLQLLDTVADSLRHWPADLRLAINLSPRQFLDTSLLERLSTVMHAHGLPLSRL 122 GL+D LL+++L + W LA NLSP+Q + L + A PL RL Sbjct: 65 HGLIDMLLVRVLSKACRAAAAWDGSFFLAFNLSPQQLQNAGLFSLIRAAAEAGRFPLERL 124 Query: 123 QLEITESSLVQDHERTLQTIRAARQAGASLSLDDFGTGYSSLTRLQSYPFDEIKIDASFV 182 Q+EITES+LV D + ++AG ++LDDFG G+S+L RL + FD+IKIDASFV Sbjct: 125 QMEITESALVGDIGVAAALVGELKRAGIRIALDDFGIGFSNLERLHALAFDKIKIDASFV 184 Query: 183 RTMDQDPDSFRIVLAVAGLGQSLKMHVVAEGVETSHHAHLLKRMGCEFGQGFHLGRPAPL 242 + M+ D DS +IV ++ GLGQSL + VVAEGVET A +L+ +GC GQG+ G P P Sbjct: 185 QNMEGDRDSRKIVASIIGLGQSLGVDVVAEGVETRAQADILRGLGCGLGQGWLFGYPVPA 244 Query: 243 AEAARLIEQQ-GVWQRHSAGIDTSPFQRWHQLDS 275 +AA + + G A + SPFQR HQL++ Sbjct: 245 PDAAAALRRGFGKPAPAEALSEASPFQRLHQLEA 278 >CC0091_3 [T] COG2200 FOG Ccr Caulobacter vibrioides Length = 267 Score = 192 bits (488), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 104/236 (44%), Positives = 144/236 (61%) Query: 7 ADDIRTALDAGHLWPALQPLIHLRTGRIAGFEMLARWSCPQRGVVSPVDFITVAEDAGLL 66 A D+R + L QPL G + GFE L RW P RG++ P+DFI VAE+ GL+ Sbjct: 7 ARDLRQGIADNELIVHYQPLARAADGEVCGFEALVRWKHPTRGMIPPLDFIPVAEENGLI 66 Query: 67 DTLLLQLLDTVADSLRHWPADLRLAINLSPRQFLDTSLLERLSTVMHAHGLPLSRLQLEI 126 + L +L W LR+A+NLSP Q + +L + V+ GL SRL+LEI Sbjct: 67 EALGDWVLRRACADAAAWEKPLRIAVNLSPIQLHNPALPTLVHEVLITTGLSPSRLELEI 126 Query: 127 TESSLVQDHERTLQTIRAARQAGASLSLDDFGTGYSSLTRLQSYPFDEIKIDASFVRTMD 186 TES+L +D++R L +R + G +++DDFGTG+SSL+ LQS+PFD+IKID SFV + Sbjct: 127 TESALFKDYQRALDNLRRLKALGVRIAMDDFGTGFSSLSTLQSFPFDKIKIDKSFVENIH 186 Query: 187 QDPDSFRIVLAVAGLGQSLKMHVVAEGVETSHHAHLLKRMGCEFGQGFHLGRPAPL 242 + + IV AV GLG+SL++ VVAEGVET L+ C QG+ +GRPAP+ Sbjct: 187 RHDRATAIVRAVLGLGRSLEIPVVAEGVETEEQILFLRGEDCAELQGYAIGRPAPV 242