BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0646.p         (174 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2719 [C] COG3038 Cytochrome B561 Rso Ralstonia solanacearum        194   6e-50
PA0422 [C] COG3038 Cytochrome B561 Pae Pseudomonas aeruginosa         100   2e-21
CC3391_1 [C] COG3038 Cytochrome B561 Ccr Caulobacter vibrioides        97   1e-20
yceJ [C] COG3038 Cytochrome B561 Eco Escherichia coli K12              97   1e-20
Z1693 [C] COG3038 Cytochrome B561 EcZ Escherichia coli O157:H7 E...    97   2e-20

>RSc2719 [C] COG3038 Cytochrome B561 Rso Ralstonia solanacearum
          Length = 195

 Score =  194 bits (494), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 97/171 (56%), Positives = 121/171 (70%)

Query: 4   YTKPAVLLHWLIALLIISAFGLGLTMVDIPGLTPTKLKYFSWHKWLGVTVLALACVRLLW 63
           Y KPA+ LHW+IALLI +AFGLGL M DIPG TPTKLK +S+HKW G+TVL LA +R+LW
Sbjct: 22  YGKPAIALHWIIALLIFAAFGLGLYMTDIPGFTPTKLKLYSYHKWAGITVLILAVLRVLW 81

Query: 64  RLTHKAPAYPANMPGWQQAAAHSLHLGLYALMFAIPVSGYFYSLSAGVPVVYLGVLPLPV 123
           RLTH APA  A MP WQQ AA   H+ LY L+ A+P++GY  S++AG+ VVYLG+  LP+
Sbjct: 82  RLTHPAPAPVAGMPAWQQKAAEGAHIVLYLLILAVPLTGYLLSVAAGIKVVYLGLWELPM 141

Query: 124 LMAPDPALKPLLKEIHYWLNMTLLAAFALHVLAALKHQFIDRDNIFKRMLP 174
                 ALK + +  H WLN T+     LH+LAALKH  +D D   +RMLP
Sbjct: 142 PFDKSDALKEIFQVAHEWLNWTMATIVVLHILAALKHHIVDSDGTLRRMLP 192


>PA0422 [C] COG3038 Cytochrome B561 Pae Pseudomonas aeruginosa
          Length = 189

 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/172 (36%), Positives = 88/172 (51%)

Query: 2   ERYTKPAVLLHWLIALLIISAFGLGLTMVDIPGLTPTKLKYFSWHKWLGVTVLALACVRL 61
            RY   ++ LHW  AL++   FGLGL M ++    P      + HK +G+ +     VR+
Sbjct: 8   SRYGVFSLFLHWGSALVVFGLFGLGLWMRELSYYDPWYHPAPALHKSIGILLAIALLVRI 67

Query: 62  LWRLTHKAPAYPANMPGWQQAAAHSLHLGLYALMFAIPVSGYFYSLSAGVPVVYLGVLPL 121
           +WR     P  PAN     + A+   HL LY L+ A+ V+GY  S + G P+   G   +
Sbjct: 68  VWRFVSPPPPAPANHGPLTRVASKLGHLALYGLLLAVIVAGYLISTADGEPISVFGWFSV 127

Query: 122 PVLMAPDPALKPLLKEIHYWLNMTLLAAFALHVLAALKHQFIDRDNIFKRML 173
           P  ++  P    +  EIH +L   L+    LH LAALKH F+DRD   KRML
Sbjct: 128 PATLSGLPDQADVAGEIHLYLAWALVVFAVLHALAALKHHFVDRDPTLKRML 179


>CC3391_1 [C] COG3038 Cytochrome B561 Ccr Caulobacter vibrioides
          Length = 287

 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/181 (37%), Positives = 95/181 (52%), Gaps = 10/181 (5%)

Query: 3   RYTKPAVLLHWLIALLIISAFGLGLTMVDIPGLTPTKLKYFSWHKWLGVTVLALACVRLL 62
           RYT  A++LHWLIA  II    LG    D P   PT       HK +G+T+L L+  RL 
Sbjct: 7   RYTTVAIVLHWLIAAAIIFQIILGWRAEDGPK-GPTTFALMQLHKSIGITILLLSLARLG 65

Query: 63  WRLTHKAPAYPANMPGWQQAAAHSLHLGLYALMFAIPVSGYF--YSLSAGVPVVYLGVLP 120
           WRL + AP  P   P W+Q A+  +H+G Y +M  +P++G+    +    +P +  G +P
Sbjct: 66  WRLVNPAPPAPVGQPRWEQTASKIVHIGFYVIMIGLPLTGWILVSTSRTNLPTLLFGAIP 125

Query: 121 LPVL-MAPDPALKP--LLKEI----HYWLNMTLLAAFALHVLAALKHQFIDRDNIFKRML 173
            P L + P+ A  P  L  EI    H  L  T     ALH+ A  KHQ +D+D +F+ M 
Sbjct: 126 WPHLPLLPELAAGPKHLWHEIGEIGHNVLVKTTYLLLALHLGAVAKHQILDKDAVFQNMA 185

Query: 174 P 174
           P
Sbjct: 186 P 186


>yceJ [C] COG3038 Cytochrome B561 Eco Escherichia coli K12
          Length = 188

 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 87/172 (50%)

Query: 2   ERYTKPAVLLHWLIALLIISAFGLGLTMVDIPGLTPTKLKYFSWHKWLGVTVLALACVRL 61
           ERY   +   HWL A+++   F LGL MV +        K    HK +G+ ++    +R+
Sbjct: 8   ERYGVISAAFHWLSAIIVYGMFALGLWMVTLSYYDGWYHKAPELHKSIGILLMMGLVIRV 67

Query: 62  LWRLTHKAPAYPANMPGWQQAAAHSLHLGLYALMFAIPVSGYFYSLSAGVPVVYLGVLPL 121
           LWR+    P    +     + AA + HL LY L+FAI +SGY  S + G P+   G   +
Sbjct: 68  LWRVISPPPGPLPSYSPMTRLAARAGHLALYLLLFAIGISGYLISTADGKPISVFGWFDV 127

Query: 122 PVLMAPDPALKPLLKEIHYWLNMTLLAAFALHVLAALKHQFIDRDNIFKRML 173
           P  +A   A       +H+WL  +++    +H   ALKH FID+D+  KRML
Sbjct: 128 PATLADAGAQADFAGALHFWLAWSVVVLSVMHGFMALKHHFIDKDDTLKRML 179


>Z1693 [C] COG3038 Cytochrome B561 EcZ Escherichia coli O157:H7 EDL933
          Length = 188

 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 87/172 (50%)

Query: 2   ERYTKPAVLLHWLIALLIISAFGLGLTMVDIPGLTPTKLKYFSWHKWLGVTVLALACVRL 61
           ERY   +   HWL A+++   F LGL MV +        K    HK +G+ ++    +R+
Sbjct: 8   ERYGVISAAFHWLSAIIVYGMFALGLWMVTLSYYDGWYHKAPELHKSIGILLMMGLVIRV 67

Query: 62  LWRLTHKAPAYPANMPGWQQAAAHSLHLGLYALMFAIPVSGYFYSLSAGVPVVYLGVLPL 121
           LWR+    P    +     + AA + HL LY L+FAI +SGY  S + G P+   G   +
Sbjct: 68  LWRVISPPPGPLPSYSPMTRLAAKAGHLALYLLLFAIGISGYLISTADGKPISVFGWFDV 127

Query: 122 PVLMAPDPALKPLLKEIHYWLNMTLLAAFALHVLAALKHQFIDRDNIFKRML 173
           P  +A   A       +H+WL  +++    +H   ALKH FID+D+  KRML
Sbjct: 128 PATLADAGAQADFAGALHFWLAWSVVVLSVMHGFMALKHHFIDKDDTLKRML 179