BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0537.p (597 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA2567_3 [T] COG2200 FOG Pae Pseudomonas aeruginosa 214 6e-55 slr1588_2 [T] COG2200 FOG Syn Synechocystis 199 1e-50 sll0821_4 [T] COG2200 FOG Syn Synechocystis 196 2e-49 PA0575_4 [T] COG2200 FOG Pae Pseudomonas aeruginosa 195 3e-49 PA4367_3 [T] COG2200 FOG Pae Pseudomonas aeruginosa 189 1e-47 >PA2567_3 [T] COG2200 FOG Pae Pseudomonas aeruginosa Length = 254 Score = 214 bits (544), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 110/251 (43%), Positives = 151/251 (60%) Query: 343 AFWVLSALPVAFNTPGELSLYYQPKVRLQDGACIGVEALIRWQHPILGNISPEVFISLAE 402 AF +L++L A T L YQPK+ L G C GVEAL+RW+HP LG +SP F+ LAE Sbjct: 2 AFTLLTSLSQAIGTEEGFHLVYQPKIDLPTGRCTGVEALLRWRHPQLGFVSPAEFVPLAE 61 Query: 403 KTAQIRQITTWVVRQAVAQAAHWAQRGRATPVAINTSARDFEADDLQCLLAQLLMQHMVP 462 KTA +R ++ WV+R A+AQ A W R +AIN SA D E +L + + Sbjct: 62 KTALMRPLSDWVLRHAMAQLAQWNARNIPLRLAINVSASDMEDSSFLEEAVRLAKTYDID 121 Query: 463 PGLIEIEFTESAMASNPEVVRQRVQAIRELGVKVAIDDFGAGFSNLSYLKSIPADVMKID 522 +E+EFTES + + V + RELG+ +A+DDFG G+SN +YL+ +P +K+D Sbjct: 122 LSALELEFTESVLIRDASAVGSVLLRARELGMGIAVDDFGTGYSNWTYLRDLPITAIKLD 181 Query: 523 RSFIRGLVDDEADQVIVPSIIHLAHQLGFGVVAEGVECERTVRLLQHLGCDYAQGYAIAR 582 +SF R L Q + ++I LA QLG+ VVAEG+E T LLQ GC QGY IA+ Sbjct: 182 QSFTRDLAGSPKAQSVTQAVIGLASQLGYRVVAEGIETHDTFHLLQAWGCHEGQGYLIAQ 241 Query: 583 PMPAEELEEWM 593 PM E+LE+W+ Sbjct: 242 PMLPEQLEDWL 252 >slr1588_2 [T] COG2200 FOG Syn Synechocystis Length = 283 Score = 199 bits (507), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 103/243 (42%), Positives = 145/243 (59%), Gaps = 2/243 (0%) Query: 350 LPVAFNTPGELSLYYQPKVRLQDGACIGVEALIRWQHPILGNISPEVFISLAEKTAQIRQ 409 L V NT G++ L+YQPKV + + G EALIRW HP G +SP +FI +AEKT I Sbjct: 27 LEVGLNT-GQVFLFYQPKVSIHNHCLAGCEALIRWHHPRKGFVSPGLFIPIAEKTGFISV 85 Query: 410 ITTWVVRQAVAQAAHWAQRG-RATPVAINTSARDFEADDLQCLLAQLLMQHMVPPGLIEI 468 + WV+ + Q W +G VAIN SAR F +DL C+L ++ V P +E+ Sbjct: 86 VGEWVIETVLRQCQQWQYQGLDPIQVAINISARQFHGEDLICILRLGTHKYDVSPQQLEV 145 Query: 469 EFTESAMASNPEVVRQRVQAIRELGVKVAIDDFGAGFSNLSYLKSIPADVMKIDRSFIRG 528 E TE+ + N + +++ +R G VAIDDFG G+S+LSYL+ P DV+KID+SF+R Sbjct: 146 ELTETLLVKNVQDSIKQLNELRAEGFSVAIDDFGTGYSSLSYLQQFPFDVLKIDQSFVRH 205 Query: 529 LVDDEADQVIVPSIIHLAHQLGFGVVAEGVECERTVRLLQHLGCDYAQGYAIARPMPAEE 588 + + ++ I SII+LAH+L V AEGVE + H+GCD QGY +RP+P + Sbjct: 206 IDKNAKNKTITASIINLAHELELRVTAEGVETWAEYDTIAHMGCDELQGYLFSRPLPVAD 265 Query: 589 LEE 591 E Sbjct: 266 FTE 268 >sll0821_4 [T] COG2200 FOG Syn Synechocystis Length = 255 Score = 196 bits (497), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 100/239 (41%), Positives = 148/239 (61%), Gaps = 1/239 (0%) Query: 356 TPGELSLYYQPKVRLQDGACIGVEALIRWQHPILGNISPEVFISLAEKTAQIRQITTWVV 415 T E LY+QP+V L G +GVEAL+RWQHP LG ++P+VFI LAE+ I + WV+ Sbjct: 14 TNQEFVLYFQPQVALDTGKLLGVEALVRWQHPRLGQVAPDVFIPLAEELGLINHLGQWVL 73 Query: 416 RQAVAQAAHW-AQRGRATPVAINTSARDFEADDLQCLLAQLLMQHMVPPGLIEIEFTESA 474 A A H+ + GR +A+N SAR F+ + + + L + +PP +E+E TES Sbjct: 74 ETACATHQHFFRETGRRLRMAVNISARQFQDEKWLNSVLECLKRTGMPPEDLELEITESL 133 Query: 475 MASNPEVVRQRVQAIRELGVKVAIDDFGAGFSNLSYLKSIPADVMKIDRSFIRGLVDDEA 534 M + + + +RE GV+VAIDDFG G+S+LS LK +P +KID+SF+ L+++ A Sbjct: 134 MMEDIKGTVVLLHRLREEGVQVAIDDFGTGYSSLSILKQLPIHRLKIDKSFVNDLLNEGA 193 Query: 535 DQVIVPSIIHLAHQLGFGVVAEGVECERTVRLLQHLGCDYAQGYAIARPMPAEELEEWM 593 D I+ +I LA+ L VAEG+E E ++ LQ +GC QGY + RP+PAE + ++ Sbjct: 194 DTAIIQYVIDLANGLNLETVAEGIESEAQLQRLQKMGCHLGQGYFLTRPLPAEAMMTYL 252 >PA0575_4 [T] COG2200 FOG Pae Pseudomonas aeruginosa Length = 267 Score = 195 bits (495), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 99/230 (43%), Positives = 136/230 (59%), Gaps = 1/230 (0%) Query: 359 ELSLYYQPKVRLQDGACIGVEALIRWQHPILGNISPEVFISLAEKTAQIRQITTWVVRQA 418 EL LYYQPK+ L+ G +G EAL+RW HP+ G ISPE FI LAE I + WV+ A Sbjct: 17 ELQLYYQPKLSLESGLLVGAEALVRWYHPLFGEISPERFIPLAEDCGLILPLGDWVLEHA 76 Query: 419 VAQAAHWAQ-RGRATPVAINTSARDFEADDLQCLLAQLLMQHMVPPGLIEIEFTESAMAS 477 Q W + P+++N + L L QLL Q + P +++E TES + + Sbjct: 77 CQQMGEWQKLHAPFGPLSVNLAGAQLGQPQLIERLEQLLEQSGLEPSRLQLEITESFIMN 136 Query: 478 NPEVVRQRVQAIRELGVKVAIDDFGAGFSNLSYLKSIPADVMKIDRSFIRGLVDDEADQV 537 E + ++ LGV++AIDDFG G+S+LSYLK +P D++KID+SFIRGL DD D Sbjct: 137 QTEEALAVLHGLKRLGVQLAIDDFGTGYSSLSYLKRLPLDILKIDKSFIRGLPDDPHDAA 196 Query: 538 IVPSIIHLAHQLGFGVVAEGVECERTVRLLQHLGCDYAQGYAIARPMPAE 587 I +II L + V+AEGVE E L H GC+ QG+ ++ P+PAE Sbjct: 197 ITRAIIALGRSMQLTVIAEGVETEGQQSFLTHEGCEQIQGFVLSPPLPAE 246 >PA4367_3 [T] COG2200 FOG Pae Pseudomonas aeruginosa Length = 267 Score = 189 bits (481), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 97/240 (40%), Positives = 144/240 (60%), Gaps = 1/240 (0%) Query: 359 ELSLYYQPKVRLQDGACIGVEALIRWQHPILGNISPEVFISLAEKTAQIRQITTWVVRQA 418 EL L YQP+V +D +GVEAL+RWQHP+ G + P++FI LAE+ I I WV+ QA Sbjct: 17 ELHLVYQPQVDYRDHRVVGVEALLRWQHPLHGFVPPDLFIPLAEQNGSIFSIGEWVLDQA 76 Query: 419 VAQAAHWAQRG-RATPVAINTSARDFEADDLQCLLAQLLMQHMVPPGLIEIEFTESAMAS 477 Q W +G +A+N S + L +++ LL + +P +E+E TE+ + Sbjct: 77 CRQLREWHDQGFDDLRMAVNLSTVQLHHNALPRVVSNLLQVYRLPARSLELEVTETGLME 136 Query: 478 NPEVVRQRVQAIRELGVKVAIDDFGAGFSNLSYLKSIPADVMKIDRSFIRGLVDDEADQV 537 + Q + ++R G +AIDDFG G+S+LSYLKS+P D +KID+SF++ L+ DE D Sbjct: 137 DISTAAQHLLSLRRAGALIAIDDFGTGYSSLSYLKSLPLDKIKIDKSFVQDLLQDEDDAT 196 Query: 538 IVPSIIHLAHQLGFGVVAEGVECERTVRLLQHLGCDYAQGYAIARPMPAEELEEWMGMSR 597 IV +II L LG V+AEGVE + GC+ QGY ++P+PA EL +++ +R Sbjct: 197 IVRAIIQLGKSLGMQVIAEGVETAEQEAYIIAEGCNEGQGYLYSKPLPARELTQYLKQAR 256