BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0532.p         (59 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

STM1729 [S] COG3685 Uncharacterized protein conserved in bacteri...    61   7e-10
yciF [S] COG3685 Uncharacterized protein conserved in bacteria E...    58   6e-09
ZyciF [S] COG3685 Uncharacterized protein conserved in bacteria ...    58   7e-09
ECs1830 [S] COG3685 Uncharacterized protein conserved in bacteri...    58   7e-09
Z1923 [S] COG3685 Uncharacterized protein conserved in bacteria ...    54   1e-07

>STM1729 [S] COG3685 Uncharacterized protein conserved in bacteria Sty
          Salmonella typhimurium LT2
          Length = 167

 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 26/38 (68%), Positives = 32/38 (84%)

Query: 1  MTVKTLKDLFIHSLSDVYSAEKQLTRALPRLARAATTP 38
          M +KT++DLFIH LSD YSAEKQLT+ALP+LARA +  
Sbjct: 1  MNIKTVEDLFIHLLSDTYSAEKQLTKALPKLARATSNE 38


>yciF [S] COG3685 Uncharacterized protein conserved in bacteria Eco
          Escherichia coli K12
          Length = 166

 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 25/38 (65%), Positives = 31/38 (81%)

Query: 1  MTVKTLKDLFIHSLSDVYSAEKQLTRALPRLARAATTP 38
          M +KT++D+FIH LSD YSAEKQLTRAL +LARA +  
Sbjct: 1  MNMKTIEDVFIHLLSDTYSAEKQLTRALAKLARATSNE 38


>ZyciF [S] COG3685 Uncharacterized protein conserved in bacteria EcZ
          Escherichia coli O157:H7 EDL933
          Length = 166

 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 25/38 (65%), Positives = 31/38 (81%)

Query: 1  MTVKTLKDLFIHSLSDVYSAEKQLTRALPRLARAATTP 38
          M +KT++D+FIH LSD YSAEKQLTRAL +LARA +  
Sbjct: 1  MNMKTIEDVFIHLLSDTYSAEKQLTRALAKLARATSNE 38


>ECs1830 [S] COG3685 Uncharacterized protein conserved in bacteria Ecs
          Escherichia coli O157:H7
          Length = 166

 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 25/38 (65%), Positives = 31/38 (81%)

Query: 1  MTVKTLKDLFIHSLSDVYSAEKQLTRALPRLARAATTP 38
          M +KT++D+FIH LSD YSAEKQLTRAL +LARA +  
Sbjct: 1  MNMKTIEDVFIHLLSDTYSAEKQLTRALAKLARATSNE 38


>Z1923 [S] COG3685 Uncharacterized protein conserved in bacteria EcZ
          Escherichia coli O157:H7 EDL933
          Length = 168

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 31/35 (88%)

Query: 1  MTVKTLKDLFIHSLSDVYSAEKQLTRALPRLARAA 35
          M +K+++D+FIH LSD YSAEKQLT+AL +L+R+A
Sbjct: 3  MQIKSVEDIFIHLLSDTYSAEKQLTKALSKLSRSA 37