BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0511.p         (171 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UU301 [S] COG1385 Uncharacterized protein conserved in bacteria ...    32   0.88 
ECU10g1380 Non COG                                                     30   3.0  

>UU301 [S] COG1385 Uncharacterized protein conserved in bacteria Uur
           Ureaplasma urealyticum
          Length = 234

 Score = 31.6 bits (70), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 1/35 (2%)

Query: 105 LTVLDEHGEMLARRHYSVNWQAGISFHEPLQYEKD 139
           LT++ E  E  ARR++ VN+ A  SF+E L+Y +D
Sbjct: 120 LTIIKEACEQ-ARRNHLVNYYAQFSFNELLKYLRD 153


>ECU10g1380 Non COG
          Length = 2410

 Score = 29.6 bits (65), Expect = 3.0,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 61   SFERAQKSLTDDFVYLGVSHILRSTKYKILTAPRPQDGDNDRLELTVLDEHG 112
            S E A KS +   VY+  S +LRS+ ++++ A  P++    RLE+ +  E G
Sbjct: 2042 SVEGADKSSSFYRVYVDRSDVLRSSYFQVM-AKSPEEFRTRRLEIKLTGEEG 2092