BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0508.p         (132 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGl1330 [E] COG0747 ABC-type dipeptide transport system, peripla...    30   1.6  
CC3152 Non COG                                                         29   2.1  
SA2078 [F] COG1957 Inosine-uridine nucleoside N-ribohydrolase Sa...    28   4.0  

>AGl1330 [E] COG0747 ABC-type dipeptide transport system, periplasmic
           component Atu Agrobacterium tumefaciens strain C58
           (Cereon)
          Length = 649

 Score = 29.6 bits (65), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 5/35 (14%)

Query: 57  VDPYTEP-TFTEYHPAGTRYASPEAPIAPAWYPYN 90
           +DP  +P  F  +HP G+RYA P A     WY  N
Sbjct: 527 LDPMLDPRDFFAFHPQGSRYAIPWA----LWYTSN 557


>CC3152 Non COG
          Length = 451

 Score = 29.3 bits (64), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)

Query: 58  DPYTEPTFTEYHPAGTRYASP--EAPIAP 84
           DP++  TFT   PAG R A+P   AP+ P
Sbjct: 316 DPWSLVTFTITEPAGYRLAAPLDVAPVTP 344


>SA2078 [F] COG1957 Inosine-uridine nucleoside N-ribohydrolase Sau
          Staphylococcus aureus N315
          Length = 313

 Score = 28.5 bits (62), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 12/47 (25%), Positives = 26/47 (55%)

Query: 40 LPLSLPETQLVDIATLIVDPYTEPTFTEYHPAGTRYASPEAPIAPAW 86
          L L +   QL+ ++T+  D Y EP+ +       R+++ +  +AP++
Sbjct: 21 LLLQMENVQLIGVSTIGADCYLEPSLSASVKIINRFSNEDIQVAPSY 67