BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0456.p         (161 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BS_yyaI [R] COG0110 Acetyltransferase (isoleucine patch superfam...    63   2e-10
ZwcaF [R] COG0110 Acetyltransferase (isoleucine patch superfamil...    62   4e-10
ECs2859 [R] COG0110 Acetyltransferase (isoleucine patch superfam...    62   4e-10
lacA [R] COG0110 Acetyltransferase (isoleucine patch superfamily...    62   7e-10
wcaF [R] COG0110 Acetyltransferase (isoleucine patch superfamily...    61   1e-09

>BS_yyaI [R] COG0110 Acetyltransferase (isoleucine patch superfamily) Bsu
           Bacillus subtilis
          Length = 184

 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 67/139 (48%), Gaps = 7/139 (5%)

Query: 7   LKNRLLRCAGLQVGRHVAIDRGFEWLAQGGTVILEDHVVLGRNVKIYNFSNVSVGSFCMF 66
           ++ +LL+     VG  V I   F     G  + + DH  +  +  I +   V +G  C+ 
Sbjct: 45  VRTKLLKELLGSVGDQVTILPTFRC-DYGYHIHIGDHTFVNFDCVILDVCEVRIGCHCLI 103

Query: 67  AGEVLIANGGHDTSTFLPFSGN-----LSIGRGCWIGTGVKIVGADLEIGDNAVLGAGAL 121
           A  V I   GH        SG      ++IG   WIG G  ++   + IGDNAV+ +G++
Sbjct: 104 APGVHIYTAGHPLDPIERKSGKEFGKPVTIGDQVWIG-GRAVINPGVTIGDNAVIASGSV 162

Query: 122 VNKSVPPGAIVGGVPARIL 140
           V K VP   +VGG PARIL
Sbjct: 163 VTKDVPANTVVGGNPARIL 181


>ZwcaF [R] COG0110 Acetyltransferase (isoleucine patch superfamily) EcZ
           Escherichia coli O157:H7 EDL933
          Length = 182

 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 6/147 (4%)

Query: 3   WRWELKNRLLRCAGLQVGRHVAIDRGFEWLAQGGTVILEDHVVLGRNVKIYNFSNVSVGS 62
           +RW  +  LLR  G ++G++V I    + +     + L D+V +G +V +Y    +++G+
Sbjct: 40  YRW--RAFLLRLFGAKIGKNVVIRPSVK-ITYPWKLTLGDYVWVGDDVNLYTLGEITIGA 96

Query: 63  FCMFAGEVLIANGGHDTST--FLPFSGNLSIGRGCWIGTGVKIVGADLEIGDNAVLGAGA 120
             + + +  +  G HD ++  F   +  + IG  CW+ T V  V   + IGD  V+GA +
Sbjct: 97  HSVISQKSYLCTGSHDHASQHFTINATPIVIGEKCWLATDV-FVAPGVTIGDGTVVGARS 155

Query: 121 LVNKSVPPGAIVGGVPARILGYRELPE 147
            V KS+P   +  G PA ++  R   E
Sbjct: 156 SVFKSLPANVVCRGNPAVVIRKRVETE 182


>ECs2859 [R] COG0110 Acetyltransferase (isoleucine patch superfamily) Ecs
           Escherichia coli O157:H7
          Length = 182

 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 6/147 (4%)

Query: 3   WRWELKNRLLRCAGLQVGRHVAIDRGFEWLAQGGTVILEDHVVLGRNVKIYNFSNVSVGS 62
           +RW  +  LLR  G ++G++V I    + +     + L D+V +G +V +Y    +++G+
Sbjct: 40  YRW--RAFLLRLFGAKIGKNVVIRPSVK-ITYPWKLTLGDYVWVGDDVNLYTLGEITIGA 96

Query: 63  FCMFAGEVLIANGGHDTST--FLPFSGNLSIGRGCWIGTGVKIVGADLEIGDNAVLGAGA 120
             + + +  +  G HD ++  F   +  + IG  CW+ T V  V   + IGD  V+GA +
Sbjct: 97  HSVISQKSYLCTGSHDHASQHFTINATPIVIGEKCWLATDV-FVAPGVTIGDGTVVGARS 155

Query: 121 LVNKSVPPGAIVGGVPARILGYRELPE 147
            V KS+P   +  G PA ++  R   E
Sbjct: 156 SVFKSLPANVVCRGNPAVVIRKRVETE 182


>lacA [R] COG0110 Acetyltransferase (isoleucine patch superfamily) Eco
           Escherichia coli K12
          Length = 203

 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 66/126 (52%), Gaps = 8/126 (6%)

Query: 31  WLAQGGTVILEDHVVLGRNVKIYNFSNVSVGSFCMFAGEVLIANGGHDTSTFLPFSGNL- 89
           + + G  + +  +     N+ I +   V++G   + A  V ++  GH     L  +G + 
Sbjct: 69  YFSYGSNIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMY 128

Query: 90  ----SIGRGCWIGTGVKIVGADLEIGDNAVLGAGALVNKSVPPGAIVGGVPARILGYREL 145
               +IG   WIG+ V ++   + IGDN+V+GAG++V K +PP  +  GVP R++  RE+
Sbjct: 129 SFPITIGNNVWIGSHV-VINPGVTIGDNSVIGAGSIVTKDIPPNVVAAGVPCRVI--REI 185

Query: 146 PEKVWH 151
            ++  H
Sbjct: 186 NDRDKH 191


>wcaF [R] COG0110 Acetyltransferase (isoleucine patch superfamily) Eco
           Escherichia coli K12
          Length = 182

 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 74/147 (50%), Gaps = 6/147 (4%)

Query: 3   WRWELKNRLLRCAGLQVGRHVAIDRGFEWLAQGGTVILEDHVVLGRNVKIYNFSNVSVGS 62
           +RW  +  LLR  G ++G++V I    + +     + L D+  +G +V +Y    +++G+
Sbjct: 40  YRW--RAFLLRLFGAKIGKNVVIRPSVK-ITYPWKLTLGDYAWVGDDVNLYTLGEITIGA 96

Query: 63  FCMFAGEVLIANGGHDTST--FLPFSGNLSIGRGCWIGTGVKIVGADLEIGDNAVLGAGA 120
             + + +  +  G HD ++  F   +  + IG  CW+ T V  V   + IGD  V+GA +
Sbjct: 97  HSVISQKSYLCTGSHDHASQHFTINATPIVIGEKCWLATDV-FVAPGVTIGDGTVVGARS 155

Query: 121 LVNKSVPPGAIVGGVPARILGYRELPE 147
            V KS+P   +  G PA ++  R   E
Sbjct: 156 SVFKSLPANVVCRGNPAVVIRERVETE 182