BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0440.p (339 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMa2117_2 [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH re... 233 3e-61 SMa1500_2 [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH re... 233 4e-61 PA3498 [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reduc... 219 7e-57 CC2394 Non COG 217 2e-56 PA4905 [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reduc... 217 3e-56 >SMa2117_2 [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Sme Sinorhizobium meliloti Length = 312 Score = 233 bits (595), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 131/323 (40%), Positives = 185/323 (57%), Gaps = 12/323 (3%) Query: 16 LRLRVRAVRHAAEGIRLFELVAQEDAALPPWTPGAHLRLHLQDGLVRAYSLCNTPQQRDF 75 +R++V A+GI F+L LP + PGAH+ +HL +GLVR YSL N P + D Sbjct: 1 IRVQVARKWQTADGIMAFQLRPVR-GLLPTFQPGAHIDVHLPNGLVRQYSLTNGPGETDC 59 Query: 76 YVIAVKRESDSRGGSAFLHEQVQQGDSISASPPVNAFPLIADPRAPLLLAAGIGITPLHA 135 + I VK + SRGGS LH+ V++GD ++ S P N FPL D + +A GIG+TPL A Sbjct: 60 FTIGVKLDPASRGGSQCLHDSVREGDVLAISEPRNNFPLRRDALKTIFVAGGIGVTPLLA 119 Query: 136 MAAEMAAQRRRHRLHYFARSLAHAAFFHELAACSQGMSLHLGLDGSETERAIAAALAAVP 195 MA + Q + LHYFA++ AF A + HLGL +T + + L+A Sbjct: 120 MAQTLNNQSLDYELHYFAQNEQQLAFSECRQALGDAVKPHLGLSPGDTVKELRRLLSAYL 179 Query: 196 SSSPLYVCGPAPFIGAARRHAQLAGWHESDIHFEWFAAPVMANAEPQSAAQAHAEERVFE 255 + LYVCGP P + + R A AGW E+ +HFE+F + + + FE Sbjct: 180 PDTQLYVCGPGPMLESTRSLAAEAGWPEAAVHFEYFKNTNVID-----------DSSSFE 228 Query: 256 LVLQRSGLRCEVQPGQSIVAAAAQLGVVIGTSCGEGFCGSCESTVLDGQPLHRDSVLSDA 315 + L RS L +V GQSI+ A + GV + +SC +G CG+C +TV++G+P H+D LS + Sbjct: 229 VALARSCLTIKVAAGQSILEAMREAGVDLPSSCEQGACGTCLATVIEGEPDHQDVYLSPS 288 Query: 316 ERASGRRILPCVSRCAGTRLVLD 338 ERASG +I+ CVSR RLVLD Sbjct: 289 ERASGTKIMTCVSRSKSARLVLD 311 >SMa1500_2 [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Sme Sinorhizobium meliloti Length = 312 Score = 233 bits (595), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 130/324 (40%), Positives = 187/324 (57%), Gaps = 14/324 (4%) Query: 18 LRVRAVRH--AAEGIRLFELVAQEDAALPPWTPGAHLRLHLQDGLVRAYSLCNTPQQRDF 75 +RV R AA+GI FEL + LP + PGAH+ +H+ +GL+R YS+ N P + D Sbjct: 1 IRVTVARKWMAADGIAAFELRPIK-GLLPTFQPGAHIDVHMPNGLIRQYSITNGPGESDS 59 Query: 76 YVIAVKRESDSRGGSAFLHEQVQQGDSISASPPVNAFPLIADPRAPLLLAAGIGITPLHA 135 YVI VK E +S+GGS +HE ++ GD ++ S P N FPL D + +A GIG TPL A Sbjct: 60 YVIGVKLERESKGGSRCMHETLRAGDVLAISEPRNNFPLRRDAEKTIFVAGGIGATPLIA 119 Query: 136 MAAEMAAQRRRHRLHYFARSLAHAAFFHELAACSQGMSLHLGLDGSETERAIAAALAAVP 195 MA + Q HYFA++ A AF + A + + LGLD TE + L+ Sbjct: 120 MAQALKNQSLDFAFHYFAQNQAQLAFPEKTALLGEALKPQLGLDPEGTEAKLKDILSGYR 179 Query: 196 SSSPLYVCGPAPFIGAARRHAQLAGWHESDIHFEWFAAPVMANAEPQSAAQAHAEERVFE 255 +Y+CGP P + AARR A GW E+ +HFE+F N S++ FE Sbjct: 180 PGMHVYLCGPGPMLEAARRIAAEVGWPETAVHFEYFKN---TNTIDDSSS--------FE 228 Query: 256 LVLQRSGLRCEVQPGQSIVAAAAQLGVVIGTSCGEGFCGSCESTVLDGQPLHRDSVLSDA 315 + L RS + +V G++I+ ++G+ + +SC +G CG+C +TV++G+P H+D L+DA Sbjct: 229 VALARSCVTFKVPAGRTILDVMREVGIDMPSSCEQGACGTCLATVIEGEPDHQDVYLNDA 288 Query: 316 ERASGRRILPCVSRCAGTRLVLDL 339 ER SG +I+ CVSR RLVLDL Sbjct: 289 ERKSGTKIMTCVSRAKSARLVLDL 312 >PA3498 [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Pae Pseudomonas aeruginosa Length = 318 Score = 219 bits (558), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 134/320 (41%), Positives = 182/320 (56%), Gaps = 12/320 (3%) Query: 20 VRAVRHAAEGIRLFELVAQEDAALPPWTPGAHLRLHLQDGLVRAYSLCNTPQQRDFYVIA 79 V +R A+GI EL Q D PP++ GAH+ LHL +GLVR+YSL N+P+ YV+ Sbjct: 11 VHTLRFEAQGILGVELRPQGDQVFPPFSAGAHIDLHLPNGLVRSYSLLNSPEDCGRYVLG 70 Query: 80 VKRESDSRGGSAFLHEQVQQGDSISASPPVNAFPLIADPRAPLLLAAGIGITPLHAMAAE 139 + R+ SRGGSAF+H+ ++ G + S P N FPL + +L+A GIG+TP++ M Sbjct: 71 ILRDRGSRGGSAFVHDSLRVGMQLQISRPRNLFPLEENAAHSVLVAGGIGVTPIYCMFNR 130 Query: 140 MAAQRRRHRLHYFARSLAHAAFFHELAACSQGMSLHLGLDGSETERAIAAALAAVPSSSP 199 + A R L Y ARS AAF ELAA + LH D + A L A S++ Sbjct: 131 LRALGRSVELLYCARSRQEAAFVEELAASDAAIQLHFD-DEKGGPMDLGAFLGARASTAH 189 Query: 200 LYVCGPAPFIGAARRHAQLAGWHESDIHFEWFAAPVMANAEPQSAAQAHAEERVFELVLQ 259 Y CGP P I A H + G +H E FAA A A PQ + +E+ L Sbjct: 190 FYCCGPTPMIDAFETHCERLG--HPHVHIERFAAAPQAPAAPQGS---------YEVRLA 238 Query: 260 RSGLRCEVQPGQSIVAAAAQLGVVIGTSCGEGFCGSCESTVLDGQPLHRDSVLSDAERAS 319 RSG EV G+S++ A + GV + SC EG CGSCE+ VL+G+P HRD VL+ AE+ + Sbjct: 239 RSGTSIEVPSGKSLLDALLEAGVAVDCSCREGVCGSCETRVLEGEPEHRDGVLTKAEKIA 298 Query: 320 GRRILPCVSRCAGTRLVLDL 339 + ++ CVS C G+RLVLDL Sbjct: 299 NQTMMVCVSGCKGSRLVLDL 318 >CC2394 Non COG Length = 316 Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 133/325 (40%), Positives = 175/325 (53%), Gaps = 11/325 (3%) Query: 16 LRLRVRAVRHAAEGIRLFELVAQEDAALPPWTPGAHLRLHLQDGLVRAYSLCNTPQQRDF 75 +++RV + AAEGI +LV E LP + GAH+ L L +GL R YSLC+ P +R F Sbjct: 2 IKVRVASRARAAEGIAQLDLVCAEGRDLPAFEAGAHIDLFLGNGLTRQYSLCSDPAERSF 61 Query: 76 YVIAVKRESDSRGGSAFLHEQVQQGDSISASPPVNAFPLIADPRAPLLLAAGIGITPLHA 135 Y IAV RE SRGGSA++HE + +G ++ SPP N F L LL A G+G+TP+ A Sbjct: 62 YRIAVLRELTSRGGSAYVHEALTEGATLEISPPRNLFALDETAEEHLLFAGGVGVTPILA 121 Query: 136 MAAEMAAQRRRHRLHYFARSLAHAAFFHELAACSQGMSLHLGLDGS-ETERAIAAALAAV 194 MA ++A R HY AR + AAF +EL+ ++ L D +T + ALA Sbjct: 122 MAKRLSALGRAFTFHYCARDRSRAAFLNELSTAPFTSAVRLSFDAEPDTRLDLDVALARP 181 Query: 195 PSSSPLYVCGPAPFIGAARRHAQLAGWHESDIHFEWFAAPVMANAEPQSAAQAHAEERVF 254 LYVCGP F+ A GW I E FAA P SA Q ++ F Sbjct: 182 KPGRRLYVCGPGGFMTHVIDGALARGWSGDQIRKEHFAAA------PLSAGQ----DQPF 231 Query: 255 ELVLQRSGLRCEVQPGQSIVAAAAQLGVVIGTSCGEGFCGSCESTVLDGQPLHRDSVLSD 314 ELV+ SG V Q+ A GV + SC +G CG+C + V+DGQP HRD+ +D Sbjct: 232 ELVIASSGQIVTVAADQTAAQALEAAGVFVPVSCEQGVCGTCLTRVIDGQPDHRDAFQTD 291 Query: 315 AERASGRRILPCVSRCAGTRLVLDL 339 ERA+ + PC SR RLVLDL Sbjct: 292 EERAANDQFTPCCSRARSPRLVLDL 316 >PA4905 [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Pae Pseudomonas aeruginosa Length = 317 Score = 217 bits (553), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 137/322 (42%), Positives = 178/322 (55%), Gaps = 12/322 (3%) Query: 20 VRAVRHAAEGIRLFELVAQEDAALPPWTPGAHLRLHLQDGLVRAYSLCNTPQQRDFYVIA 79 V A+R A+ I FEL + AALP + PGAH+ LHL +GLVR YSLC ++ Y IA Sbjct: 6 VGAIRLEAQDIHSFELFRADGAALPSFEPGAHIDLHLPNGLVRQYSLCGPAERPRHYRIA 65 Query: 80 VKRESDSRGGSAFLHEQVQQGDSISASPPVNAFPLIADPRAPLLLAAGIGITPLHAMAAE 139 V R DSRGGSA LH +++ G + P N FPL +P LL A GIGITPL AMA Sbjct: 66 VLRCRDSRGGSATLHAELRVGQRLHIGEPRNLFPLSPEPGPHLLFAGGIGITPLLAMAER 125 Query: 140 MAAQRRRHRLHYFARSLAHAAFFHELAACSQGMSLHLGLDGSETER--AIAAALAAVPSS 197 +A +LHY A S AAF L C+ +H D E+ R + A LA P Sbjct: 126 LARDGADFQLHYCAHSGERAAFVDYLGRCAFADRVHCHFDHGESSRRADLRALLATSPRD 185 Query: 198 SPLYVCGPAPFIGAARRHAQLAGWHESDIHFEWFAAPVMANAEPQSAAQAHAEERVFELV 257 + LY+CGPA F+ A+ GW S +H E FAA P+ A+ + FE+ Sbjct: 186 AQLYLCGPAGFMQWIEESARELGWEASRLHREHFAAA------PRDASA----DGTFEVQ 235 Query: 258 LQRSGLRCEVQPGQSIVAAAAQLGVVIGTSCGEGFCGSCESTVLDGQPLHRDSVLSDAER 317 L +G V GQ+++AA + GV + SC +G CG+C + VLDG+P HRD LS+ E+ Sbjct: 236 LASNGALIRVAAGQTVLAALREAGVDLPASCEQGICGTCLTRVLDGEPEHRDLYLSEEEQ 295 Query: 318 ASGRRILPCVSRCAGTRLVLDL 339 A+ PC SR RLVLDL Sbjct: 296 AANDCFTPCCSRSRSPRLVLDL 317