BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0386.p (215 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value XF2170 [R] COG1881 Phospholipid-binding protein Xfa Xylella fast... 189 3e-48 AGl1304 [R] COG1881 Phospholipid-binding protein Atu Agrobacteri... 142 4e-34 ZybhB [R] COG1881 Phospholipid-binding protein EcZ Escherichia c... 81 1e-15 ECs0851 [R] COG1881 Phospholipid-binding protein Ecs Escherichia... 81 1e-15 ybhB [R] COG1881 Phospholipid-binding protein Eco Escherichia co... 81 2e-15 >XF2170 [R] COG1881 Phospholipid-binding protein Xfa Xylella fastidiosa 9a5c Length = 204 Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 95/214 (44%), Positives = 132/214 (61%), Gaps = 15/214 (7%) Query: 1 MKFWSDSFKDGGNIPGEFAFAVMDPKTHVALSANRNPHFAWSELPAGTKSLALVVHDPDV 60 M S+ FK+G IP E A D + NRNPH AW ++P T+S AL+ DPDV Sbjct: 1 MHLISNDFKNGQPIPLECAAGQTD-----GFAPNRNPHLAWDDVPENTRSFALLCIDPDV 55 Query: 61 PSRGDDVNQEGKTVPLELPRVDFYHWTLVDIPASVSQIKAGQFSNGVSARGK---PGPAV 117 PS + + + +P+ PR+DF HW + D+ A + I G S+G RGK PGPA Sbjct: 56 PSIPETIGRTDMEIPVTQPRIDFVHWVMADLSADLRMIAHGSCSDGFVVRGKTMPPGPA- 114 Query: 118 LGDVMPGARQGINDYTGWFAGDGDMRGDYFGYDGPCPPWNDALVHRYIFTLYALDVEQLP 177 G RQG+NDYT +FA +M GDY+GYDGP PP+ND +HRY+F L+AL++E+LP Sbjct: 115 ------GTRQGLNDYTKFFANTPEMAGDYYGYDGPYPPFNDLRIHRYLFRLFALNLERLP 168 Query: 178 VAGNLEGSVVLTALRDHVLEQASITGLYTLNPNA 211 + + +G +L A++ HVL +A++ G YTLNP A Sbjct: 169 LPQHFDGPALLRAIQGHVLTEAALYGTYTLNPKA 202 >AGl1304 [R] COG1881 Phospholipid-binding protein Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 236 Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 74/184 (40%), Positives = 102/184 (55%), Gaps = 5/184 (2%) Query: 32 SANRNPHFAWSELPAGTKSLALVVHDPDVPSRGDDVNQEGKTVPLELPRVDFYHWTLVDI 91 S + +P +WS P GT+S AL++ DPDVP +N+ G T+P E PR+ +HW L DI Sbjct: 55 SKDVSPGVSWSAGPEGTRSYALLMIDPDVPQDFSLINKPGTTIPAEAPRISVFHWVLADI 114 Query: 92 PASVSQIKAGQFSNGVSARGKPGPAVLGDVMPGARQGINDYTGWFAGDGDMRGDYFGYDG 151 PA + I G S G+ GKP +G V P +G N YT + A M G Y GYDG Sbjct: 115 PAGIMSIGEGAESEGLVPGGKP----VG-VTPHGLRGANVYTSFLAKTDGMAGTYGGYDG 169 Query: 152 PCPPWNDALVHRYIFTLYALDVEQLPVAGNLEGSVVLTALRDHVLEQASITGLYTLNPNA 211 PCPP ND +H Y ++ALDV L ++G G V ++ H+L Y+LNP+ Sbjct: 170 PCPPINDQRIHHYTLKVFALDVPTLGLSGPFTGEDVKKSMAGHILASGEAIATYSLNPSL 229 Query: 212 VPRS 215 +P + Sbjct: 230 IPAA 233 >ZybhB [R] COG1881 Phospholipid-binding protein EcZ Escherichia coli O157:H7 EDL933 Length = 158 Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 92/207 (44%), Gaps = 50/207 (24%) Query: 1 MKFWSDSFKDGGNIPGEFAFAVMDPKTHVALSANRNPHFAWSELPAGTKSLALVVHDPDV 60 MK S+ +DG +P F M N +PH AW ++PAGTKS + +DPD Sbjct: 1 MKLISNDLRDGDKLPHRHVFNGMGYD-----GDNISPHLAWDDVPAGTKSFVVTCYDPDA 55 Query: 61 PSRGDDVNQEGKTVPLELPRVDFYHWTLVDIPASVSQIKAGQFSNGVSARGKPGPAVLGD 120 P+ ++HW +V++PA + G F +G+ A Sbjct: 56 PTGS-----------------GWWHWVVVNLPADTRVLPQG-FGSGLVA----------- 86 Query: 121 VMP-GARQGINDYTGWFAGDGDMRGDYFGYDGPCPPWNDALVHRYIFTLYALDVEQLPVA 179 MP G Q D+ GYDG PP + HRYIFT++ALDVE++ V Sbjct: 87 -MPDGVLQTRTDFG------------KTGYDGAAPPKGE--THRYIFTVHALDVERIDVD 131 Query: 180 GNLEGSVVLTALRDHVLEQASITGLYT 206 G++V + H L ASIT +++ Sbjct: 132 EGASGAMVGFNVHFHSLASASITAMFS 158 >ECs0851 [R] COG1881 Phospholipid-binding protein Ecs Escherichia coli O157:H7 Length = 158 Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 92/207 (44%), Gaps = 50/207 (24%) Query: 1 MKFWSDSFKDGGNIPGEFAFAVMDPKTHVALSANRNPHFAWSELPAGTKSLALVVHDPDV 60 MK S+ +DG +P F M N +PH AW ++PAGTKS + +DPD Sbjct: 1 MKLISNDLRDGDKLPHRHVFNGMGYD-----GDNISPHLAWDDVPAGTKSFVVTCYDPDA 55 Query: 61 PSRGDDVNQEGKTVPLELPRVDFYHWTLVDIPASVSQIKAGQFSNGVSARGKPGPAVLGD 120 P+ ++HW +V++PA + G F +G+ A Sbjct: 56 PTGS-----------------GWWHWVVVNLPADTRVLPQG-FGSGLVA----------- 86 Query: 121 VMP-GARQGINDYTGWFAGDGDMRGDYFGYDGPCPPWNDALVHRYIFTLYALDVEQLPVA 179 MP G Q D+ GYDG PP + HRYIFT++ALDVE++ V Sbjct: 87 -MPDGVLQTRTDFG------------KTGYDGAAPPKGE--THRYIFTVHALDVERIDVD 131 Query: 180 GNLEGSVVLTALRDHVLEQASITGLYT 206 G++V + H L ASIT +++ Sbjct: 132 EGASGAMVGFNVHFHSLASASITAMFS 158 >ybhB [R] COG1881 Phospholipid-binding protein Eco Escherichia coli K12 Length = 158 Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 92/207 (44%), Gaps = 50/207 (24%) Query: 1 MKFWSDSFKDGGNIPGEFAFAVMDPKTHVALSANRNPHFAWSELPAGTKSLALVVHDPDV 60 MK S+ +DG +P F M N +PH AW ++PAGTKS + +DPD Sbjct: 1 MKLISNDLRDGDKLPHRHVFNGMGYD-----GDNISPHLAWDDVPAGTKSFVVTCYDPDA 55 Query: 61 PSRGDDVNQEGKTVPLELPRVDFYHWTLVDIPASVSQIKAGQFSNGVSARGKPGPAVLGD 120 P+ ++HW +V++PA + G F +G+ A Sbjct: 56 PTGS-----------------GWWHWVVVNLPADTRVLPQG-FGSGLVA----------- 86 Query: 121 VMP-GARQGINDYTGWFAGDGDMRGDYFGYDGPCPPWNDALVHRYIFTLYALDVEQLPVA 179 MP G Q D+ GYDG PP + HRYIFT++ALD+E++ V Sbjct: 87 -MPDGVLQTRTDFG------------KTGYDGAAPPKGE--THRYIFTVHALDIERIDVD 131 Query: 180 GNLEGSVVLTALRDHVLEQASITGLYT 206 G++V + H L ASIT +++ Sbjct: 132 EGASGAMVGFNVHFHSLASASITAMFS 158