BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0385.p         (163 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0497 Non COG                                                       208   4e-54
dtd [J] COG1490 D-Tyr-tRNAtyr deacylase Eco Escherichia coli K12      169   2e-42
ZyihZ [J] COG1490 D-Tyr-tRNAtyr deacylase EcZ Escherichia coli O...   169   2e-42
ECs4810 [J] COG1490 D-Tyr-tRNAtyr deacylase Ecs Escherichia coli...   169   2e-42
HI0670 [J] COG1490 D-Tyr-tRNAtyr deacylase Hin Haemophilus influ...   167   6e-42

>RSc0497 Non COG
          Length = 166

 Score =  208 bits (529), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 106/154 (68%), Positives = 122/154 (79%), Gaps = 7/154 (4%)

Query: 1   MIALLQRVSQAAVVVEGQTLGAIGSGLMVLVCAERHDTVTQADALLKKLLAYRVFSDAAG 60
           MI L+QRVSQAAV V+G+ +G IG GL+ LVCAER DTV +AD LL+KLL YRVFSDA G
Sbjct: 1   MIGLIQRVSQAAVRVDGRVVGEIGPGLLALVCAERGDTVAEADRLLEKLLNYRVFSDAQG 60

Query: 61  KMNRSVTDVQ-----GGLLLIPQFTLAADTKSGTRPSFTPAAAPELGRQLFDHFVERARA 115
           KMN  V ++      GGLL++ QFTLAADTKSGTRPSFTPAAAPE GR+L++HFV RAR 
Sbjct: 61  KMNLPVRNIDGNGLAGGLLVVSQFTLAADTKSGTRPSFTPAAAPEAGRRLYEHFVARARQ 120

Query: 116 QHGQDRVGTGRFGADMKVSLTNDGPVTFWLQVSP 149
           QH    V TG FGA M+VSL NDGPVTFWLQV+P
Sbjct: 121 QH--PIVATGEFGAMMQVSLVNDGPVTFWLQVAP 152


>dtd [J] COG1490 D-Tyr-tRNAtyr deacylase Eco Escherichia coli K12
          Length = 145

 Score =  169 bits (429), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 81/147 (55%), Positives = 108/147 (73%), Gaps = 2/147 (1%)

Query: 1   MIALLQRVSQAAVVVEGQTLGAIGSGLMVLVCAERHDTVTQADALLKKLLAYRVFSDAAG 60
           MIAL+QRV++A+V VEG+  G IG+GL+VL+  E+ D   +A+ L +++L YR+FSDA G
Sbjct: 1   MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAEG 60

Query: 61  KMNRSVTDVQGGLLLIPQFTLAADTKSGTRPSFTPAAAPELGRQLFDHFVERARAQHGQD 120
           KMN +V    G +L++ QFTLAADT+ G RPSF+  A+P+    L+D+FVER R Q    
Sbjct: 61  KMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVERCRQQEMNT 120

Query: 121 RVGTGRFGADMKVSLTNDGPVTFWLQV 147
           +  TGRF ADM+VSL NDGPVTFWLQV
Sbjct: 121 Q--TGRFAADMQVSLVNDGPVTFWLQV 145


>ZyihZ [J] COG1490 D-Tyr-tRNAtyr deacylase EcZ Escherichia coli O157:H7
           EDL933
          Length = 145

 Score =  169 bits (429), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 81/147 (55%), Positives = 108/147 (73%), Gaps = 2/147 (1%)

Query: 1   MIALLQRVSQAAVVVEGQTLGAIGSGLMVLVCAERHDTVTQADALLKKLLAYRVFSDAAG 60
           MIAL+QRV++A+V VEG+  G IG+GL+VL+  E+ D   +A+ L +++L YR+FSDA G
Sbjct: 1   MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAEG 60

Query: 61  KMNRSVTDVQGGLLLIPQFTLAADTKSGTRPSFTPAAAPELGRQLFDHFVERARAQHGQD 120
           KMN +V    G +L++ QFTLAADT+ G RPSF+  A+P+    L+D+FVER R Q    
Sbjct: 61  KMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVERCRQQEMNT 120

Query: 121 RVGTGRFGADMKVSLTNDGPVTFWLQV 147
           +  TGRF ADM+VSL NDGPVTFWLQV
Sbjct: 121 Q--TGRFAADMQVSLVNDGPVTFWLQV 145


>ECs4810 [J] COG1490 D-Tyr-tRNAtyr deacylase Ecs Escherichia coli O157:H7
          Length = 145

 Score =  169 bits (429), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 81/147 (55%), Positives = 108/147 (73%), Gaps = 2/147 (1%)

Query: 1   MIALLQRVSQAAVVVEGQTLGAIGSGLMVLVCAERHDTVTQADALLKKLLAYRVFSDAAG 60
           MIAL+QRV++A+V VEG+  G IG+GL+VL+  E+ D   +A+ L +++L YR+FSDA G
Sbjct: 1   MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAEG 60

Query: 61  KMNRSVTDVQGGLLLIPQFTLAADTKSGTRPSFTPAAAPELGRQLFDHFVERARAQHGQD 120
           KMN +V    G +L++ QFTLAADT+ G RPSF+  A+P+    L+D+FVER R Q    
Sbjct: 61  KMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVERCRQQEMNT 120

Query: 121 RVGTGRFGADMKVSLTNDGPVTFWLQV 147
           +  TGRF ADM+VSL NDGPVTFWLQV
Sbjct: 121 Q--TGRFAADMQVSLVNDGPVTFWLQV 145


>HI0670 [J] COG1490 D-Tyr-tRNAtyr deacylase Hin Haemophilus influenzae
          Length = 144

 Score =  167 bits (424), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 80/147 (54%), Positives = 107/147 (72%), Gaps = 3/147 (2%)

Query: 1   MIALLQRVSQAAVVVEGQTLGAIGSGLMVLVCAERHDTVTQADALLKKLLAYRVFSDAAG 60
           MIAL+QRVSQA V V+G+T+G IG GL+VL+  E+ D   +AD L +K+L YR+FSD   
Sbjct: 1   MIALIQRVSQAKVDVKGETIGKIGKGLLVLLGVEKEDNREKADKLAEKVLNYRIFSDEND 60

Query: 61  KMNRSVTDVQGGLLLIPQFTLAADTKSGTRPSFTPAAAPELGRQLFDHFVERARAQHGQD 120
           KMN +V   QG LL++ QFTLAADT+ G RPSF+  A+P L  +L+++F+++   +    
Sbjct: 61  KMNLNVQQAQGELLIVSQFTLAADTQKGLRPSFSKGASPALANELYEYFIQKCAEKL--- 117

Query: 121 RVGTGRFGADMKVSLTNDGPVTFWLQV 147
            V TG+F ADM+VSLTNDGPVTFWL V
Sbjct: 118 PVSTGQFAADMQVSLTNDGPVTFWLNV 144