BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0219.p (242 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGl381 [E] COG1126 ABC-type polar amino acid transport system, A... 307 2e-83 AGc2580 [E] COG1126 ABC-type polar amino acid transport system, ... 306 2e-83 AGpA331 [E] COG1126 ABC-type polar amino acid transport system, ... 306 4e-83 SMa0508 [E] COG1126 ABC-type polar amino acid transport system, ... 286 4e-77 AF0680 [E] COG1126 ABC-type polar amino acid transport system, A... 281 1e-75 >AGl381 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 243 Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 150/235 (63%), Positives = 186/235 (79%), Gaps = 1/235 (0%) Query: 5 VELQAVHKRFGNNAVLRGVSFKVARGEVVAIIGKSGSGKSTALRCINRLEQIDAGQISVC 64 V ++ VHK FG VL+GVS V RGEV A+IG+SGSGKST LRC+N LE+I++G+I + Sbjct: 4 VIVENVHKSFGALEVLKGVSLTVGRGEVFALIGRSGSGKSTLLRCMNGLEKINSGRIEIA 63 Query: 65 GHAVHTTQLDLRALRRDVGIVFQSYNLFAHLTVLQNITLGPTAVKRLAPAEAQELARQVL 124 GHA+ LR LR DVGIVFQSYNLF HLTV +NI L P VK +A +E +++AR+VL Sbjct: 64 GHALGGDATALRKLRTDVGIVFQSYNLFPHLTVGENIMLAPRIVKDVAKSETKDIAREVL 123 Query: 125 ERVGLGDKAQAYPEQLSGGQQQRVAIARSLAMQPQLMLFDEVTSALDPELTGEVLKIMEQ 184 + VGL +K +YP+QLSGGQQQRVAIARSLAM+P++MLFDEVTSALDPELT EVL +ME Sbjct: 124 QLVGLSEKFDSYPDQLSGGQQQRVAIARSLAMRPKVMLFDEVTSALDPELTEEVLTVMEN 183 Query: 185 MAAEGMTMILVTHEMSFARRVADQVIFMHQGQVWEQG-GPDILDSPATPELRNFV 238 +A GMTMILVTHEM+FARRVA + IFMH+G++WEQG ++ +P TPELR FV Sbjct: 184 LAKGGMTMILVTHEMAFARRVATETIFMHKGKIWEQGRSAELFANPQTPELRQFV 238 >AGc2580 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 243 Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 151/241 (62%), Positives = 184/241 (76%), Gaps = 1/241 (0%) Query: 3 TIVELQAVHKRFGNNAVLRGVSFKVARGEVVAIIGKSGSGKSTALRCINRLEQIDAGQIS 62 ++V + VHKR+G VL+GVS V G+VVAIIG+SGSGKST LRCIN LE+ +G I+ Sbjct: 2 SVVTIDQVHKRYGALEVLKGVSLNVEAGQVVAIIGRSGSGKSTMLRCINGLEEFQSGNIT 61 Query: 63 VCGHAVHTTQLDLRALRRDVGIVFQSYNLFAHLTVLQNITLGPTAVKRLAPAEAQELARQ 122 GH V Q LR LR+DVGIVFQSYNLF HLTV +NI L P + +A A+A LAR+ Sbjct: 62 AAGHRVEQDQTKLRQLRKDVGIVFQSYNLFPHLTVGENIMLSPKITQDVARADADVLARK 121 Query: 123 VLERVGLGDKAQAYPEQLSGGQQQRVAIARSLAMQPQLMLFDEVTSALDPELTGEVLKIM 182 VL +VGL +K AYP+ LSGGQQQRVAIARSLAM+P++MLFDEVTSALDPELTGEVL +M Sbjct: 122 VLAQVGLAEKFDAYPDMLSGGQQQRVAIARSLAMRPKVMLFDEVTSALDPELTGEVLLVM 181 Query: 183 EQMAAEGMTMILVTHEMSFARRVADQVIFMHQGQVWEQGGPD-ILDSPATPELRNFVGTG 241 EQ+A EGMTM+LVTHEMSFAR VA +FMHQG++WE G + + P TPEL+ F+ G Sbjct: 182 EQLAREGMTMLLVTHEMSFARSVAHVTVFMHQGKIWEMGASKQLFEKPQTPELQAFLSNG 241 Query: 242 L 242 + Sbjct: 242 V 242 >AGpA331 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 243 Score = 306 bits (783), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 149/237 (62%), Positives = 183/237 (77%), Gaps = 1/237 (0%) Query: 4 IVELQAVHKRFGNNAVLRGVSFKVARGEVVAIIGKSGSGKSTALRCINRLEQIDAGQISV 63 +VE++ V K +G VL+GVS V +GE+V IIG+SGSGKST LRCIN LE I++G+I + Sbjct: 3 LVEIKNVRKNYGPLEVLKGVSLDVEKGEIVTIIGRSGSGKSTLLRCINALETINSGEILL 62 Query: 64 CGHAVHTTQLDLRALRRDVGIVFQSYNLFAHLTVLQNITLGPTAVKRLAPAEAQELARQV 123 G V LR +R+ VGIVFQ++NLF H+T+ +N+TL P R A+ELA V Sbjct: 63 EGQPVSANMDGLRQMRQKVGIVFQAFNLFPHMTIEKNVTLAPVLTGRTDKRGARELALSV 122 Query: 124 LERVGLGDKAQAYPEQLSGGQQQRVAIARSLAMQPQLMLFDEVTSALDPELTGEVLKIME 183 LERVGL DK +AYPEQLSGGQQQRVAIAR LAM P LMLFDEVTSALDPEL GEVLK+ME Sbjct: 123 LERVGLADKLKAYPEQLSGGQQQRVAIARCLAMSPHLMLFDEVTSALDPELVGEVLKVME 182 Query: 184 QMAAEGMTMILVTHEMSFARRVADQVIFMHQGQVWEQGGPD-ILDSPATPELRNFVG 239 +MAA+GMTM+LVTHEMSFAR VA +++FMHQG+VWEQG P + P TPEL++F+G Sbjct: 183 EMAAQGMTMVLVTHEMSFARNVATKLVFMHQGRVWEQGDPKRLFADPQTPELKSFIG 239 >SMa0508 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Sme Sinorhizobium meliloti Length = 243 Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 143/237 (60%), Positives = 177/237 (74%), Gaps = 1/237 (0%) Query: 3 TIVELQAVHKRFGNNAVLRGVSFKVARGEVVAIIGKSGSGKSTALRCINRLEQIDAGQIS 62 ++V + + K FG VL+GVS V GEVVA+IG SGSGKST LRC+N LE +D+G+I Sbjct: 2 SVVVAKNIRKSFGGLQVLKGVSLTVEGGEVVALIGGSGSGKSTFLRCLNGLESVDSGEIE 61 Query: 63 VCGHAVHTTQLDLRALRRDVGIVFQSYNLFAHLTVLQNITLGPTAVKRLAPAEAQELARQ 122 V GH + +LR LRRDVGIVFQSYNLF HLT +NI L P VK + A+ A++ Sbjct: 62 VAGHRMSRKPAELRRLRRDVGIVFQSYNLFPHLTAGENIMLAPVQVKGIGKDAARSEAKR 121 Query: 123 VLERVGLGDKAQAYPEQLSGGQQQRVAIARSLAMQPQLMLFDEVTSALDPELTGEVLKIM 182 L VGLGD+ +AYP+ LSGGQQQRVAIARSLAMQP+++LFDEVTSALDPELTGEVL ++ Sbjct: 122 CLSLVGLGDRFEAYPDMLSGGQQQRVAIARSLAMQPKVLLFDEVTSALDPELTGEVLAVI 181 Query: 183 EQMAAEGMTMILVTHEMSFARRVADQVIFMHQGQVWEQG-GPDILDSPATPELRNFV 238 E++A +GMTMILVTHEM FARRVA++ IFM G + E+G + SP TPELR F+ Sbjct: 182 EKLARDGMTMILVTHEMGFARRVANRTIFMRDGIIHEEGPSAEFFSSPKTPELRAFL 238 >AF0680 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Afu Archaeoglobus fulgidus Length = 242 Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 135/235 (57%), Positives = 178/235 (75%), Gaps = 1/235 (0%) Query: 5 VELQAVHKRFGNNAVLRGVSFKVARGEVVAIIGKSGSGKSTALRCINRLEQIDAGQISVC 64 +E+ +HKRFG VL+GV+ KV +GEVV IIG SGSGKST LRCINRLE+ +G+I + Sbjct: 4 LEIIDLHKRFGELEVLKGVTMKVEKGEVVVIIGPSGSGKSTLLRCINRLEEPTSGKILLD 63 Query: 65 GHAVHTTQLDLRALRRDVGIVFQSYNLFAHLTVLQNITLGPTAVKRLAPAEAQELARQVL 124 G + +++D+ +R+ +GIVFQ +NLF HLT LQN+TL P +K+++ EA+EL ++L Sbjct: 64 GVDITNSKIDINKVRQRIGIVFQQFNLFPHLTALQNVTLAPIKIKKMSKREAEELGMRLL 123 Query: 125 ERVGLGDKAQAYPEQLSGGQQQRVAIARSLAMQPQLMLFDEVTSALDPELTGEVLKIMEQ 184 E+VGL DKA YP QLSGGQQQRVAIAR+LAM P++MLFDEVTSALDPEL EVL +M+Q Sbjct: 124 EKVGLEDKADYYPAQLSGGQQQRVAIARALAMNPEVMLFDEVTSALDPELVKEVLDVMKQ 183 Query: 185 MAAEGMTMILVTHEMSFARRVADQVIFMHQGQVWEQGGPD-ILDSPATPELRNFV 238 +A +GMTM++VTHEM FAR V D+VIFM G + E+G P+ I +P R F+ Sbjct: 184 LARDGMTMVVVTHEMGFAREVGDRVIFMDGGVIVEEGKPEQIFSNPKHERTRKFL 238