BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0172.p         (137 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0354 [P] COG0607 Rhodanese-related sulfurtransferase Rso Rals...   118   4e-27
PA5130 [P] COG0607 Rhodanese-related sulfurtransferase Pae Pseud...    85   4e-17
YPO0065 [P] COG0607 Rhodanese-related sulfurtransferase Ype Yers...    80   2e-15
STM3703 [P] COG0607 Rhodanese-related sulfurtransferase Sty Salm...    78   7e-15
yibN [P] COG0607 Rhodanese-related sulfurtransferase Eco Escheri...    77   1e-14

>RSc0354 [P] COG0607 Rhodanese-related sulfurtransferase Rso Ralstonia
           solanacearum
          Length = 151

 Score =  118 bits (295), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 62/139 (44%), Positives = 94/139 (67%), Gaps = 7/139 (5%)

Query: 1   VKFIID--NIFLIALALVSGGALLVPYLQQR-----GNKLSLLQATQMLNQGKVLVLDVR 53
           VKF  D  N+ L+A+A+VSG  L+ P +Q+R     G ++S   ATQ++N+   +V+DVR
Sbjct: 12  VKFFADYNNLVLLAVAVVSGLLLVWPAIQRRIAGGGGAQVSASAATQLINRRNAVVVDVR 71

Query: 54  DSEQFAAGHLRDARNIPLKELPQRIGELDKLKGRPVIVVCQTGTQASRAESSLKKAGFTE 113
           ++ ++ AGHL  A++  L +L  +   L K K  P+I+VCQTG +A RA++ LK+AG++E
Sbjct: 72  EAAEYVAGHLPQAKHAALGDLASKAAGLAKNKETPIILVCQTGQRAGRAQAVLKQAGYSE 131

Query: 114 VYGLHGGIAAWQGQGLPLT 132
           VY L GG+AAWQ  GLP+ 
Sbjct: 132 VYSLEGGLAAWQQAGLPIV 150


>PA5130 [P] COG0607 Rhodanese-related sulfurtransferase Pae Pseudomonas
           aeruginosa
          Length = 139

 Score = 85.1 bits (209), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 44/106 (41%), Positives = 66/106 (62%), Gaps = 1/106 (0%)

Query: 26  LQQRGNKLSLLQATQMLNQGKVLVLDVRDSEQFAAGHLRDARNIPLKELPQRIGELDKLK 85
           L++ G  LS  + T ++N  + +VLD+R +++FA+GH+ DA NIP  +L  R+ EL+K K
Sbjct: 33  LRKGGKSLSTRELTALVNADQAVVLDIRPAKEFASGHIVDALNIPADKLNSRMTELEKYK 92

Query: 86  GRPVIVVCQTGTQASRAESSLKKAGFTEVYGLHGGIAAWQGQGLPL 131
           G+ +I+V   G  +      LKKAGF     L GGI +W+G  LPL
Sbjct: 93  GKTIILVDAMGQHSGTWGGVLKKAGFNAAK-LSGGIGSWRGDNLPL 137


>YPO0065 [P] COG0607 Rhodanese-related sulfurtransferase Ype Yersinia pestis
          Length = 144

 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 59/96 (61%), Gaps = 1/96 (1%)

Query: 37  QATQMLNQGKVLVLDVRDSEQFAAGHLRDARN-IPLKELPQRIGELDKLKGRPVIVVCQT 95
           +AT+++N+   +V+D+R  E +  GH+ ++ N IP       +GEL+K K +P+IVVC  
Sbjct: 45  EATRLINKEDAVVVDIRTREDYRKGHIANSINLIPSDIKNGNLGELEKHKTQPIIVVCAM 104

Query: 96  GTQASRAESSLKKAGFTEVYGLHGGIAAWQGQGLPL 131
           GT +  +   L KAGF  V+ L  GI+ W G+ LPL
Sbjct: 105 GTTSRASADMLSKAGFERVFTLKEGISGWSGENLPL 140


>STM3703 [P] COG0607 Rhodanese-related sulfurtransferase Sty Salmonella
           typhimurium LT2
          Length = 143

 Score = 77.8 bits (190), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 61/96 (63%), Gaps = 1/96 (1%)

Query: 37  QATQMLNQGKVLVLDVRDSEQFAAGHLRDARNIPLKEL-PQRIGELDKLKGRPVIVVCQT 95
           +AT+++N+   +V+D+R  + F  GH+  A N+   E+    +GEL+K K +P+IVV  +
Sbjct: 44  EATRLINKEDAVVVDLRQRDDFRKGHIAGATNLLPSEIKANNVGELEKHKDKPIIVVDGS 103

Query: 96  GTQASRAESSLKKAGFTEVYGLHGGIAAWQGQGLPL 131
           G Q   + ++L KAGF +V+ L  G+A W G+ LPL
Sbjct: 104 GMQCQESANALTKAGFEKVFVLKEGVAGWSGENLPL 139


>yibN [P] COG0607 Rhodanese-related sulfurtransferase Eco Escherichia
           coli K12
          Length = 143

 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 70/117 (59%), Gaps = 4/117 (3%)

Query: 20  ALLVPYLQQRGNKLSLL---QATQMLNQGKVLVLDVRDSEQFAAGHLRDARNIPLKEL-P 75
           A+LV   +   +K+ ++   +AT+++N+   +V+D+R  + F  GH+  + N+   E+  
Sbjct: 24  AVLVTTFKSLTSKVKVITRGEATRLINKEDAVVVDLRQRDDFRKGHIAGSINLLPSEIKA 83

Query: 76  QRIGELDKLKGRPVIVVCQTGTQASRAESSLKKAGFTEVYGLHGGIAAWQGQGLPLT 132
             +GEL+K K +PVIVV  +G Q     ++L KAGF +V+ L  G+A W G+ LPL 
Sbjct: 84  NNVGELEKHKDKPVIVVDGSGMQCQEPANALTKAGFAQVFVLKEGVAGWAGENLPLV 140