BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0169.p         (149 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CC3721 [S] COG3807 Uncharacterized protein conserved in bacteria...    59   5e-09
AGc117 [S] COG3807 Uncharacterized protein conserved in bacteria...    49   4e-06
mll5573 [S] COG3807 Uncharacterized protein conserved in bacteri...    44   9e-05
RP809 [S] COG3807 Uncharacterized protein conserved in bacteria ...    43   3e-04
BMEI1953 [S] COG3807 Uncharacterized protein conserved in bacter...    42   5e-04

>CC3721 [S] COG3807 Uncharacterized protein conserved in bacteria Ccr
           Caulobacter vibrioides
          Length = 181

 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 4/103 (3%)

Query: 47  VYVAPRGMPVEVVLTYGEWSKVRDAAGTLSWISSKALTPKRMLM-VSVANARIFSAADEG 105
           VY A +G+PV+VV    EW ++ D  G L+W+  +    +R  M V   N  + SA  +G
Sbjct: 72  VYHA-KGLPVQVVAETREWRRICDPEGGLAWVHKRTTDGRRSAMRVQPTNLALLSAPKDG 130

Query: 106 SPVVFTADKSVLLEMLESPNNGWVKVRHRDGQSGFVKAGEVWG 148
           + V     K+  +  L+   NGW ++R  DG SG+ + GE+WG
Sbjct: 131 AKVNAYL-KARAVASLDKCENGWCRLRA-DGSSGWAREGEIWG 171


>AGc117 [S] COG3807 Uncharacterized protein conserved in bacteria Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 200

 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 16/107 (14%)

Query: 53  GMPVEVVLTYGEWSKVRDAAGTLSWISSKALTPKRMLMVS----------VANARIFSAA 102
           GMPVE++  Y  W ++RDA GT  W++   L+ +R  + +            N R    A
Sbjct: 91  GMPVEIIQEYENWRRIRDADGTEGWVNQALLSGERTAVAAPWMRGKGKEVYVNMR--REA 148

Query: 103 DEGSPVVFTADKSVLLEMLESPNNGWVKVRHRDGQ-SGFVKAGEVWG 148
             G+ V    +  V+  + E  N  W   R   GQ SG+V  GE+WG
Sbjct: 149 QSGAAVTARLEPGVVFRIGEC-NGDW--CRAEAGQASGWVSQGEIWG 192


>mll5573 [S] COG3807 Uncharacterized protein conserved in bacteria Mlo
           Mesorhizobium loti
          Length = 186

 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 8/102 (7%)

Query: 53  GMPVEVVLTYGEWSKVRDAAGTLSWISSKALTPKRMLMVSV------ANARIFSAADEGS 106
           G+P+EVV  +  W +VRDA G+  WI+   L+ +R  +++       A   +  + D+ +
Sbjct: 78  GLPMEVVQEFDTWRRVRDADGSEGWINQSLLSGRRTAIIAPWQRGKGAQINLMKSPDKDA 137

Query: 107 PVVFTADKSVLLEMLESPNNGWVKVRHRDGQSGFVKAGEVWG 148
            VV   +  V +  ++S +  W ++   +G +G++    VWG
Sbjct: 138 RVVAIVEPGV-MGTIKSCDGQWCEM-TLEGHTGWLAQAAVWG 177


>RP809 [S] COG3807 Uncharacterized protein conserved in bacteria Rpr
           Rickettsia prowazekii
          Length = 167

 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 3/98 (3%)

Query: 52  RGMPVEVVLTYGEWSKVRDAAGTLSWISSKALTPKRMLMV-SVANARIFSAADEGSPVVF 110
           +G PVE+   Y +W +VRD  G   WI S  L+ KR +++ S     +  +AD  S V+ 
Sbjct: 64  KGEPVEITAEYEQWRQVRDINGECGWIHSSVLSAKRSVIIASDKEIELTKSADPKSRVIA 123

Query: 111 TADKSVLLEMLESPNNGWVKVRHRDGQSGFVKAGEVWG 148
                V    L+     + +V  +D + G++    +WG
Sbjct: 124 KLMPKVRCS-LKKCKEEFCQVTCKDYK-GWISKKAIWG 159


>BMEI1953 [S] COG3807 Uncharacterized protein conserved in bacteria Bme
           Brucella melitensis
          Length = 167

 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 9/103 (8%)

Query: 53  GMPVEVVLTYGEWSKVRDAAGTLSWISSKALTPKRMLMVS--VANAR-----IFSAADEG 105
           G+PVE+V  Y  W ++RDA GT  W+    L+ KR  + +  + N +     +   A E 
Sbjct: 59  GLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAITAPWLKNDKGTMIAMRREAAET 118

Query: 106 SPVVFTADKSVLLEMLESPNNGWVKVRHRDGQSGFVKAGEVWG 148
           + V    +  V+  + E     W ++    G  G++K  E+WG
Sbjct: 119 AGVTAEVEPGVVGTVRECTGQ-WCRL-DMSGVRGWIKQSELWG 159