BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0158.p         (153 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGc871 [S] COG2128 Uncharacterized conserved protein Atu Agrobac...   123   2e-28
BS_ydfG [S] COG2128 Uncharacterized conserved protein Bsu Bacill...   102   3e-22
CC1784 Non COG                                                         55   8e-08
Rv3327_2 [S] COG2128 Uncharacterized conserved protein Mtu Mycob...    42   4e-04
MT3430_2 [S] COG2128 Uncharacterized conserved protein MtC Mycob...    42   5e-04

>AGc871 [S] COG2128 Uncharacterized conserved protein Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 167

 Score =  123 bits (308), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 59/150 (39%), Positives = 84/150 (56%), Gaps = 2/150 (1%)

Query: 4   FKQRLPHAKLAAPAFNALIKASEAVHQSGIDPKLVELVFLRVSQLNGCAFCADMHSHELL 63
            K R+ +AK +  AF A++     V  SG++ + + L+ LR S +NGCAFC DMH  E  
Sbjct: 15  MKTRINYAKASPEAFKAVMALENYVQSSGLEHRFIHLIKLRASIINGCAFCVDMHVKESR 74

Query: 64  QKGEDQQRLNTLATWREIPFFTDAERAALNWAERFTHLHQPDGEKEDAAFALLQQHFSDT 123
             G  +Q +N ++ WRE P +T+ ERA L W +  T + +      D AF  L+ HFSD 
Sbjct: 75  HDGLSEQWINLMSVWRESPVYTEQERALLGWVDAVTKIAETGA--PDDAFETLRAHFSDE 132

Query: 124 EIANLSFAVAIINAWNRLGVAMRPQVPRRA 153
           EI  ++ A+  IN WNR+ V  R Q P  A
Sbjct: 133 EIVKITVAIGAINTWNRIAVGFRSQHPVEA 162


>BS_ydfG [S] COG2128 Uncharacterized conserved protein Bsu Bacillus subtilis
          Length = 147

 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 79/142 (55%), Gaps = 2/142 (1%)

Query: 4   FKQRLPHAKLAAPAFNALIKASEAVHQSGIDPKLVELVFLRVSQLNGCAFCADMHSHELL 63
             QR+ + ++A      ++   +   QS I+    EL+ +RVSQ+NGCAFC DMH+ +  
Sbjct: 1   MSQRVSYYEIAPEGMKIMMDMEKYTKQSSINRTTRELIKIRVSQMNGCAFCIDMHTSDAR 60

Query: 64  QKGEDQQRLNTLATWREIPFFTDAERAALNWAERFTHLHQPDGEKEDAAFALLQQHFSDT 123
           + GE +QR+  L  W E  F++  E+AAL  +E  T +  P     D  +  +++H+ + 
Sbjct: 61  KMGETEQRIYCLHAWNECDFYSPEEKAALELSEHITLI--PSKRVPDELYHRVREHYDEE 118

Query: 124 EIANLSFAVAIINAWNRLGVAM 145
           +  +L   +  IN+WNR+ +AM
Sbjct: 119 QYVDLVLIINQINSWNRISIAM 140


>CC1784 Non COG
          Length = 91

 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 2/60 (3%)

Query: 45  VSQLNGCAFCADMHSHELLQKGEDQQRLNTLATWREIP-FFTDAERAALNWAERFTHLHQ 103
           +SQ+NGCA C D+HS + L+K     ++  L  W E+P  F++ ERAAL WAE  T + Q
Sbjct: 1   MSQINGCAHCIDLHSRD-LRKTMSVDKIALLPVWAEVPHLFSEQERAALAWAEEVTLVSQ 59


>Rv3327_2 [S] COG2128 Uncharacterized conserved protein Mtu Mycobacterium
           tuberculosis H37Rv
          Length = 192

 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 7/113 (6%)

Query: 35  PKLVELVFLRVSQLNGCAFCADMHSHELLQK--GEDQQRLNTLATWREIPFFTDAERAAL 92
           P + EL     ++  GC++C D  +  +LQ+  G D  RL  +  +     F+D ERAA+
Sbjct: 57  PSVRELAVFWTARSIGCSWCVDFGA--MLQRLDGLDVDRLTDIDNYATSSKFSDDERAAI 114

Query: 93  NWAERFTHLHQPDGEKEDAAFALLQQHFSDTEIANLSFAVAIINAWNRLGVAM 145
            +AE  T          D   A L+  F +  +  L++ + + N   R+  A+
Sbjct: 115 AYAEAMTADPH---SVTDEQVADLRARFGEAGVIELTYQIGVENMRARMNSAL 164


>MT3430_2 [S] COG2128 Uncharacterized conserved protein MtC Mycobacterium
           tuberculosis CDC1551
          Length = 183

 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 7/113 (6%)

Query: 35  PKLVELVFLRVSQLNGCAFCADMHSHELLQK--GEDQQRLNTLATWREIPFFTDAERAAL 92
           P + EL     ++  GC++C D  +  +LQ+  G D  RL  +  +     F+D ERAA+
Sbjct: 48  PSVRELAVFWTARSIGCSWCVDFGA--MLQRLDGLDVDRLTDIDNYATSSKFSDDERAAI 105

Query: 93  NWAERFTHLHQPDGEKEDAAFALLQQHFSDTEIANLSFAVAIINAWNRLGVAM 145
            +AE  T          D   A L+  F +  +  L++ + + N   R+  A+
Sbjct: 106 AYAEAMTADPH---SVTDEQVADLRARFGEAGVIELTYQIGVENMRARMNSAL 155