BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0157.p (403 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc3342 [E] COG0683 ABC-type branched-chain amino acid transport... 557 e-158 BMEII0344 [E] COG0683 ABC-type branched-chain amino acid transpo... 404 e-112 SMc03121 [E] COG0683 ABC-type branched-chain amino acid transpor... 399 e-111 AGl1462 [E] COG0683 ABC-type branched-chain amino acid transport... 395 e-109 RSp1298 [E] COG0683 ABC-type branched-chain amino acid transport... 147 4e-35 >RSc3342 [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component Rso Ralstonia solanacearum Length = 402 Score = 557 bits (1435), Expect = e-158, Method: Compositional matrix adjust. Identities = 262/385 (68%), Positives = 312/385 (81%), Gaps = 1/385 (0%) Query: 19 AATLPSAQAAGDTIKIGFITDMSGTYADFDGQGGVEAIRMAIADAGGTINGKKVELVFAD 78 AA+ AQ +GD +KIG+ITD+SG YAD DGQGGVEA++MAI D GG + GK +ELV AD Sbjct: 18 AASGAHAQVSGDKVKIGYITDLSGLYADIDGQGGVEAVKMAIEDEGGKVLGKPIELVTAD 77 Query: 79 HQNKADIAANKAREWFDRDGVDMLVGGVNSAASLAMGKVAGEKKKVFISVGAGTTRQTNE 138 HQNKADIAA+KAREW D+ G+DMLVGG NSA SLAM KVA EKK+VFI +GAGT R TNE Sbjct: 78 HQNKADIAASKAREWMDQQGLDMLVGGTNSATSLAMSKVAAEKKRVFIGIGAGTARLTNE 137 Query: 139 ECNAYTIQYAYDTTALARGTGAAITRQGGKSWYFLTADYAFGTSLEKDTSEVVKSNGGNV 198 EC YTI YAYDT ALA+GTG+A+ +QGGKSW+FLTADYAFG SLE DT+ VVK+NGG V Sbjct: 138 ECTPYTIHYAYDTVALAKGTGSAVVKQGGKSWFFLTADYAFGHSLENDTAAVVKANGGTV 197 Query: 199 VGATRVPLATSDFSSFLLQAQSSKAQILGLAVAGGDVINAIKAANEFGVNKTMKLAGLLI 258 VG+ + PL+ SDFSS+LLQAQ+SKAQILGLA AGGD IN+IKAA EFG+ KTMK+AGLL+ Sbjct: 198 VGSVKHPLSASDFSSYLLQAQASKAQILGLANAGGDTINSIKAAKEFGITKTMKIAGLLM 257 Query: 259 FINDTHSLGLQMTQGMYLTDGWYWDLNDQSRAWANRYFLKMKKMPSMFQAGDASAVGQYL 318 FIND HSLGLQ +G+ +TD WYWD+ND +R +A RYF KMKKMPS QA D SAV Y+ Sbjct: 258 FINDVHSLGLQTAEGLLMTDSWYWDMNDATRKFATRYFSKMKKMPSSLQAADYSAVSNYI 317 Query: 319 KAVKAVGSTDADQVMDYLRKHRIEDFFTSNGVVRPDGRMVHDMYLMEVKKPSESKRPWDY 378 KAV A G+ D D+V+ L+K ++ DFF S G +R DGR VHDMYLM+VK P+ESK+PWDY Sbjct: 318 KAVAAAGTDDPDKVIAQLKKTQLNDFF-SKGTIRADGRYVHDMYLMQVKTPAESKKPWDY 376 Query: 379 YKLVQTIPGEQAYMTKAESKCALWK 403 K+V TIPG+QA+ T AESKC L K Sbjct: 377 MKIVATIPGDQAFTTPAESKCPLLK 401 >BMEII0344 [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component Bme Brucella melitensis Length = 401 Score = 404 bits (1037), Expect = e-112, Method: Compositional matrix adjust. Identities = 196/381 (51%), Positives = 268/381 (70%), Gaps = 1/381 (0%) Query: 24 SAQAAGDTIKIGFITDMSGTYADFDGQGGVEAIRMAIADAGGTINGKKVELVFADHQNKA 83 +A+ + +KIG + D SG YADF G+ EA +MA D GGT+ G +E++ ADHQNK Sbjct: 20 AAEISDGKVKIGILNDQSGVYADFGGKWSYEAAKMAAEDFGGTVLGAPIEIITADHQNKP 79 Query: 84 DIAANKAREWFDRDGVDMLVGGVNSAASLAMGKVAGEKKKVFISVGAGTTRQTNEECNAY 143 D+A+N AR+W+D + VD ++ S+ LA+ ++ EKKK+ I+ GA T+ T ++C Y Sbjct: 80 DVASNIARQWYDTEQVDSIMELTTSSVGLAVQALSKEKKKITINTGAATSELTGKQCTPY 139 Query: 144 TIQYAYDTTALARGTGAAITRQGGKSWYFLTADYAFGTSLEKDTSEVVKSNGGNVVGATR 203 +AYDT ALA GTG ++ +QGG +WYFLTADYAFG SLE+ T++ V+S GG V+G+ R Sbjct: 140 GFHWAYDTHALAVGTGGSLVQQGGDTWYFLTADYAFGYSLEEQTTKFVESKGGKVLGSVR 199 Query: 204 VPLATSDFSSFLLQAQSSKAQILGLAVAGGDVINAIKAANEFG-VNKTMKLAGLLIFIND 262 PL+T+D+SSFLLQAQ+S A+++GLA AG D NAIK A EFG V +LA LL + + Sbjct: 200 HPLSTTDYSSFLLQAQASGAKVVGLANAGLDTSNAIKQAAEFGIVAGGQRLAALLFTLAE 259 Query: 263 THSLGLQMTQGMYLTDGWYWDLNDQSRAWANRYFLKMKKMPSMFQAGDASAVGQYLKAVK 322 H LGL+ QG+ LT+G+YWD +D+SRA+ R+F + +MP+M QAG SAV QYLKA+K Sbjct: 260 VHGLGLEAAQGLTLTEGFYWDRDDESRAFGKRFFDRTGRMPNMIQAGTYSAVLQYLKAIK 319 Query: 323 AVGSTDADQVMDYLRKHRIEDFFTSNGVVRPDGRMVHDMYLMEVKKPSESKRPWDYYKLV 382 G+ + + V L + +ED F +G V P+GRM++DMYLMEVKKP ESK PWDYYK++ Sbjct: 320 EAGTDETEAVAKKLHEMPVEDVFARHGKVGPNGRMIYDMYLMEVKKPEESKAPWDYYKVL 379 Query: 383 QTIPGEQAYMTKAESKCALWK 403 TIPG+QAYM ES C L K Sbjct: 380 ATIPGDQAYMKPEESGCPLVK 400 >SMc03121 [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component Sme Sinorhizobium meliloti Length = 401 Score = 399 bits (1026), Expect = e-111, Method: Compositional matrix adjust. Identities = 198/400 (49%), Positives = 269/400 (67%), Gaps = 1/400 (0%) Query: 5 IRRAALSAACALLGAATLPSAQAAGDTIKIGFITDMSGTYADFDGQGGVEAIRMAIADAG 64 + + ++ +L +T A A+ +KIG + D SG YADF G+ EA MA+ D G Sbjct: 1 MHKKLIATLAMVLAGSTAALADASDGKVKIGILNDQSGVYADFGGKSSYEAALMAVEDFG 60 Query: 65 GTINGKKVELVFADHQNKADIAANKAREWFDRDGVDMLVGGVNSAASLAMGKVAGEKKKV 124 G + G VE+V ADHQNK DIA+N AR+W+D + VD ++ S+ +LA+ ++ EKKK+ Sbjct: 61 GKVLGVPVEVVTADHQNKPDIASNIARQWYDTEQVDSIMELTTSSVALAVQAISKEKKKI 120 Query: 125 FISVGAGTTRQTNEECNAYTIQYAYDTTALARGTGAAITRQGGKSWYFLTADYAFGTSLE 184 I GA TT T ++C+ Y +AYDT +LA GTG A+ +QGG SW+FLTADYAFG SLE Sbjct: 121 DIVTGAATTELTGKQCSPYGFHWAYDTHSLAVGTGGALVKQGGDSWFFLTADYAFGYSLE 180 Query: 185 KDTSEVVKSNGGNVVGATRVPLATSDFSSFLLQAQSSKAQILGLAVAGGDVINAIKAANE 244 ++T VK NGG VVGA R PLAT+DFSSFLLQAQSS A+++GLA AG D NAIK A E Sbjct: 181 ENTGNYVKENGGTVVGAVRHPLATTDFSSFLLQAQSSGAKVIGLANAGLDTSNAIKQAAE 240 Query: 245 FG-VNKTMKLAGLLIFINDTHSLGLQMTQGMYLTDGWYWDLNDQSRAWANRYFLKMKKMP 303 FG V +LA LL + + H LGL QG+ LT+G+YW+ +++S + R+ + KMP Sbjct: 241 FGIVQGGQRLAALLFTLAEVHGLGLDAAQGLTLTEGFYWNRDEESAKFGKRFMERTGKMP 300 Query: 304 SMFQAGDASAVGQYLKAVKAVGSTDADQVMDYLRKHRIEDFFTSNGVVRPDGRMVHDMYL 363 +M AG SAV QYLKA++ G+ + + V L ++D F NG V P+GRM+HDMYL Sbjct: 301 NMVHAGTYSAVLQYLKAIEKAGTDETEAVAKELHALPVDDVFAKNGTVAPNGRMIHDMYL 360 Query: 364 MEVKKPSESKRPWDYYKLVQTIPGEQAYMTKAESKCALWK 403 +EVKKP ESK PWDY+K++ TIPG++A++ A+S C L K Sbjct: 361 LEVKKPDESKEPWDYFKVLATIPGKEAFIDPAQSGCELVK 400 >AGl1462 [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 402 Score = 395 bits (1014), Expect = e-109, Method: Compositional matrix adjust. Identities = 191/373 (51%), Positives = 264/373 (70%), Gaps = 1/373 (0%) Query: 32 IKIGFITDMSGTYADFDGQGGVEAIRMAIADAGGTINGKKVELVFADHQNKADIAANKAR 91 +KIG + D SG YA+F G+ EA +MA+ D GG + G VE+V ADHQNKAD+A+N AR Sbjct: 29 VKIGILNDQSGVYANFGGKYSYEAAKMAVEDFGGKVLGAPVEVVTADHQNKADVASNIAR 88 Query: 92 EWFDRDGVDMLVGGVNSAASLAMGKVAGEKKKVFISVGAGTTRQTNEECNAYTIQYAYDT 151 +W+D + VD ++ +S+ LA+ ++ +KKK+ ++ GA TT T ++C+ Y +AYDT Sbjct: 89 QWYDTEQVDSIMELTSSSVGLAVQALSKDKKKITVNTGAATTELTGKQCSPYGFHWAYDT 148 Query: 152 TALARGTGAAITRQGGKSWYFLTADYAFGTSLEKDTSEVVKSNGGNVVGATRVPLATSDF 211 +LA GTG A+ +QGG SW+FLTADYAFG SLE++TS VK+NGG V+G+ R PLAT+D+ Sbjct: 149 YSLAVGTGGALVKQGGDSWFFLTADYAFGYSLEENTSNFVKANGGKVLGSVRHPLATTDY 208 Query: 212 SSFLLQAQSSKAQILGLAVAGGDVINAIKAANEFG-VNKTMKLAGLLIFINDTHSLGLQM 270 SSFLLQAQSS A+++GLA AG D NAIK A+EFG V +LA LL + + H LGL+ Sbjct: 209 SSFLLQAQSSGAKVIGLANAGLDTSNAIKQASEFGIVAGGQRLAALLFTLAEVHGLGLEA 268 Query: 271 TQGMYLTDGWYWDLNDQSRAWANRYFLKMKKMPSMFQAGDASAVGQYLKAVKAVGSTDAD 330 QG+ LT+G+YWD +D+SR + R+ + MP+M G SAV YLKA++ G+ DAD Sbjct: 269 AQGLTLTEGFYWDRDDESRKFGERFKERTGAMPNMIHTGTYSAVLHYLKAIEKAGTDDAD 328 Query: 331 QVMDYLRKHRIEDFFTSNGVVRPDGRMVHDMYLMEVKKPSESKRPWDYYKLVQTIPGEQA 390 V +++ + D F +G V +GRM+HDMYLMEVKKP ESK+PWDYYK++ TIPG++A Sbjct: 329 AVAKAMKEMPVNDVFAKDGHVAANGRMIHDMYLMEVKKPDESKQPWDYYKVLATIPGKEA 388 Query: 391 YMTKAESKCALWK 403 +M +S C L K Sbjct: 389 FMDPTKSGCPLVK 401 >RSp1298 [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component Rso Ralstonia solanacearum Length = 391 Score = 147 bits (372), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 84/260 (32%), Positives = 140/260 (53%), Gaps = 5/260 (1%) Query: 26 QAAGD-TIKIGFITDMSGTYADFDGQGGVEAIRMAIA--DAGGTINGKKVELVFADHQNK 82 QA G+ ++IG + M+G YA Q V R+A+A +A G I G+ +EL+ D N Sbjct: 33 QARGEAPLRIGMVDPMTGVYAAV-AQNEVTGARLAVAQINARGGILGRPIELLVEDSAND 91 Query: 83 ADIAANKAREWFDRDGVDMLVGGVNSAASLAMGKVAGEKKKVFISVGAGTTRQTNEECNA 142 KAR+ +RD V L+G VNS + A+ +V+ EKK + I G T T +C Sbjct: 92 VGTGVQKARKLIERDQVSFLIGDVNSGIAQAIAQVSNEKKVLHIVSGGHTDTITGSDCKW 151 Query: 143 YTIQYAYDTTALARGTGAAITRQGGKSWYFLTADYAFGTSLEKDTSEVVKSNGGNVVGAT 202 + T+ A + + GK W+F+T DYAFG +L+K + ++ GG + G Sbjct: 152 NVYRVCNTTSMEANAVANLLFSKYGKKWHFITPDYAFGHTLQKAAAADLQKLGGTITGNE 211 Query: 203 RVPLATSDFSSFLLQAQSSKAQILGLAVAGGDVINAIKAANEFGVNKTMKLAGLLIFIND 262 PL T+DFS++L++A+++ +L + G D++N +K +FG+ K M +AGL + Sbjct: 212 LTPLGTTDFSAYLIKARAANPDVLLVLPQGSDMVNCLKQIAQFGIGKQMHIAGLQQELES 271 Query: 263 THSLGLQMTQGMYLTDGWYW 282 ++ + G+++ + WYW Sbjct: 272 LEAMPPEARVGIWMFE-WYW 290