BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0130.p         (139 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc3012 [J] COG0197 Ribosomal protein L16/L10E Rso Ralstonia sol...   250   8e-67
NMB0149 [J] COG0197 Ribosomal protein L16/L10E Nme Neisseria men...   234   3e-62
NMA0122 [J] COG0197 Ribosomal protein L16/L10E NmA Neisseria men...   234   3e-62
VC2589 [J] COG0197 Ribosomal protein L16/L10E Vch Vibrio cholerae     208   2e-54
rplP [J] COG0197 Ribosomal protein L16/L10E Eco Escherichia coli...   205   2e-53

>RSc3012 [J] COG0197 Ribosomal protein L16/L10E Rso Ralstonia solanacearum
          Length = 138

 Score =  250 bits (638), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 122/138 (88%), Positives = 132/138 (95%), Gaps = 1/138 (0%)

Query: 1   MLQPARRKYRKEQKGRNTGISHTRGTAVSFGDFGLKATGRGRITARQIEAARRAMTRHIK 60
           MLQP RRKYRKEQKGRNTGI+ TRG AVSFG+FGLKA GRGR+TARQIE+ARRAMTRHIK
Sbjct: 1   MLQPKRRKYRKEQKGRNTGIA-TRGNAVSFGEFGLKAMGRGRLTARQIESARRAMTRHIK 59

Query: 61  RGGRIWIRVFPDKPISQKPAEVRMGNGKGNPEYYVAEIQPGKVLYEMDGVDEALAREAFR 120
           RGGRIWIR+FPDKPIS+KPAEVRMGNGKGNPEYYVAEIQPGK+LYEMDGV E LAREAFR
Sbjct: 60  RGGRIWIRIFPDKPISKKPAEVRMGNGKGNPEYYVAEIQPGKMLYEMDGVGEELAREAFR 119

Query: 121 LAAAKLPLSTTFVVRQVG 138
           LAAAKLP++T+FVVRQVG
Sbjct: 120 LAAAKLPIATSFVVRQVG 137


>NMB0149 [J] COG0197 Ribosomal protein L16/L10E Nme Neisseria meningitidis
           MC58
          Length = 138

 Score =  234 bits (598), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 116/139 (83%), Positives = 126/139 (90%), Gaps = 1/139 (0%)

Query: 1   MLQPARRKYRKEQKGRNTGISHTRGTAVSFGDFGLKATGRGRITARQIEAARRAMTRHIK 60
           MLQP R KYRK+QKGRNTGI+ TRG  VSFG+FGLKA GRGR+TARQIEAARRAMTRHIK
Sbjct: 1   MLQPTRLKYRKQQKGRNTGIA-TRGNKVSFGEFGLKAVGRGRLTARQIEAARRAMTRHIK 59

Query: 61  RGGRIWIRVFPDKPISQKPAEVRMGNGKGNPEYYVAEIQPGKVLYEMDGVDEALAREAFR 120
           RGGRIWIRVFPDKPI++KP +VRMG GKGN EYY+AEI+PGKVLYEMDGV E LAREAF 
Sbjct: 60  RGGRIWIRVFPDKPITEKPIQVRMGGGKGNVEYYIAEIKPGKVLYEMDGVPEELAREAFE 119

Query: 121 LAAAKLPLSTTFVVRQVGQ 139
           LAAAKLP+ TTFVVRQVGQ
Sbjct: 120 LAAAKLPIPTTFVVRQVGQ 138


>NMA0122 [J] COG0197 Ribosomal protein L16/L10E NmA Neisseria meningitidis
           Z2491
          Length = 138

 Score =  234 bits (598), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 116/139 (83%), Positives = 126/139 (90%), Gaps = 1/139 (0%)

Query: 1   MLQPARRKYRKEQKGRNTGISHTRGTAVSFGDFGLKATGRGRITARQIEAARRAMTRHIK 60
           MLQP R KYRK+QKGRNTGI+ TRG  VSFG+FGLKA GRGR+TARQIEAARRAMTRHIK
Sbjct: 1   MLQPTRLKYRKQQKGRNTGIA-TRGNKVSFGEFGLKAVGRGRLTARQIEAARRAMTRHIK 59

Query: 61  RGGRIWIRVFPDKPISQKPAEVRMGNGKGNPEYYVAEIQPGKVLYEMDGVDEALAREAFR 120
           RGGRIWIRVFPDKPI++KP +VRMG GKGN EYY+AEI+PGKVLYEMDGV E LAREAF 
Sbjct: 60  RGGRIWIRVFPDKPITEKPIQVRMGGGKGNVEYYIAEIKPGKVLYEMDGVPEELAREAFE 119

Query: 121 LAAAKLPLSTTFVVRQVGQ 139
           LAAAKLP+ TTFVVRQVGQ
Sbjct: 120 LAAAKLPIPTTFVVRQVGQ 138


>VC2589 [J] COG0197 Ribosomal protein L16/L10E Vch Vibrio cholerae
          Length = 136

 Score =  208 bits (530), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 103/137 (75%), Positives = 116/137 (84%), Gaps = 2/137 (1%)

Query: 1   MLQPARRKYRKEQKGRNTGISHTRGTAVSFGDFGLKATGRGRITARQIEAARRAMTRHIK 60
           MLQP R K+RK Q GRN G++  +GT VSFG FGLKA GRGR+TARQIEAARRAMTRHIK
Sbjct: 1   MLQPKRTKFRKVQTGRNRGLA--KGTEVSFGTFGLKAVGRGRLTARQIEAARRAMTRHIK 58

Query: 61  RGGRIWIRVFPDKPISQKPAEVRMGNGKGNPEYYVAEIQPGKVLYEMDGVDEALAREAFR 120
           R G+IWIRVFPDKPI++KP EVR G GKGN EY+VA+IQPGKV+YE+DGV E LAREAFR
Sbjct: 59  RQGKIWIRVFPDKPITEKPLEVRQGKGKGNVEYWVAQIQPGKVMYEVDGVPEELAREAFR 118

Query: 121 LAAAKLPLSTTFVVRQV 137
           LAA KLP  TTFV +QV
Sbjct: 119 LAARKLPFKTTFVTKQV 135


>rplP [J] COG0197 Ribosomal protein L16/L10E Eco Escherichia coli K12
          Length = 136

 Score =  205 bits (522), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 102/137 (74%), Positives = 114/137 (83%), Gaps = 2/137 (1%)

Query: 1   MLQPARRKYRKEQKGRNTGISHTRGTAVSFGDFGLKATGRGRITARQIEAARRAMTRHIK 60
           MLQP R K+RK  KGRN G++   GT VSFG FGLKA GRGR+TARQIEAARRAMTR +K
Sbjct: 1   MLQPKRTKFRKMHKGRNRGLAQ--GTDVSFGSFGLKAVGRGRLTARQIEAARRAMTRAVK 58

Query: 61  RGGRIWIRVFPDKPISQKPAEVRMGNGKGNPEYYVAEIQPGKVLYEMDGVDEALAREAFR 120
           R G+IWIRVFPDKPI++KP  VRMG GKGN EY+VA IQPGKVLYEMDGV E LAREAF+
Sbjct: 59  RQGKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVLYEMDGVPEELAREAFK 118

Query: 121 LAAAKLPLSTTFVVRQV 137
           LAAAKLP+ TTFV + V
Sbjct: 119 LAAAKLPIKTTFVTKTV 135