BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0115.p (1413 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc3033 [K] COG0086 DNA-directed RNA polymerase, beta' subunit/1... 2422 0.0 NMB0133 [K] COG0086 DNA-directed RNA polymerase, beta' subunit/1... 2177 0.0 NMA0141 [K] COG0086 DNA-directed RNA polymerase, beta' subunit/1... 2177 0.0 PA4269 [K] COG0086 DNA-directed RNA polymerase, beta' subunit/16... 1952 0.0 XF2632 [K] COG0086 DNA-directed RNA polymerase, beta' subunit/16... 1881 0.0 >RSc3033 [K] COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit Rso Ralstonia solanacearum Length = 1409 Score = 2422 bits (6277), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1184/1379 (85%), Positives = 1275/1379 (92%), Gaps = 5/1379 (0%) Query: 1 MKALLDLFKQVQQNEQFDAIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCAK 60 MKALLDLF+QVQQ EQFDAIKIGLASP+KIRSWSFGEVKKPETINYRTFKPERDGLFCAK Sbjct: 1 MKALLDLFRQVQQEEQFDAIKIGLASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAK 60 Query: 61 IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPTAHIWFLKSL 120 IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELA+PTAHIWFLKSL Sbjct: 61 IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELAAPTAHIWFLKSL 120 Query: 121 PSRLGMVLDMTLRDIERVLYFEAYVVTDPGMTPLKKCQIMSEDDYAAKYEEYGD-DFIAF 179 PSRLGMVLDMTLRDIERVLYFEA+VV +PGMTPLKK QIMSEDDY AK +EYG+ +F+A Sbjct: 121 PSRLGMVLDMTLRDIERVLYFEAFVVVEPGMTPLKKSQIMSEDDYLAKCDEYGEGEFVAL 180 Query: 180 MGAEGIRELLRSIDIDREAETLRQELKDSKSEAKIKKYAKRLKVLEAFQRSGIKPEWMIM 239 MGAEGIRELLR IDI+++ ET+R EL+ + SEAKIKK+AKRLKVLEAFQRSGIKP+WMI+ Sbjct: 181 MGAEGIRELLRGIDIEKQIETIRAELQATGSEAKIKKFAKRLKVLEAFQRSGIKPDWMIL 240 Query: 240 EVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPEIITRNEKRML 299 EVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRL+EL+APEII RNEKRML Sbjct: 241 EVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRML 300 Query: 300 QEAVDSLLDNGRRGKAMTGANKRPLKSLAEMIKGKGGRFRQNLLGKRVDYSGRSVIVVGP 359 QEAVDSLLDNGRRGKAMTGANKRPLKSLAEMIKGKGGRFRQNLLGKRVDYSGRSVIVVGP Sbjct: 301 QEAVDSLLDNGRRGKAMTGANKRPLKSLAEMIKGKGGRFRQNLLGKRVDYSGRSVIVVGP 360 Query: 360 QLKLHQCGLPKLMALELFKPFIFNKLELMGLSTTIKAAKKLVEAQEPVVWDILEEVIREH 419 LKLHQCGLPKLMALELFKPFIF+KLE MG++TTIKAAKK VE+Q PVVWDILEEVIREH Sbjct: 361 TLKLHQCGLPKLMALELFKPFIFHKLETMGIATTIKAAKKEVESQTPVVWDILEEVIREH 420 Query: 420 PVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSIEAQME 479 PVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLS+EAQME Sbjct: 421 PVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQME 480 Query: 480 ARTLMLASNNILFPSNGEPSIVPSQDIVLGLYYATREAINGKNEGMMFQDVSEVIRAYDN 539 ARTLMLASNN+LFP+NG+PSIVPSQD+VLGLYY TR+ ING+ EGM F D+SEVIRAY+N Sbjct: 481 ARTLMLASNNVLFPANGDPSIVPSQDVVLGLYYTTRDKINGRGEGMTFADISEVIRAYEN 540 Query: 540 KEVELATRITVRIVEH----PKDPVTGEFVRTVKRYETTIGRAILSEILPKGLPFSVLNR 595 KEVELA+R+ VRI E+ P+ F + TT+GRAILSEILPKGLPFSVLN+ Sbjct: 541 KEVELASRVNVRITEYDLVNPEADGDARFAPKITLQATTVGRAILSEILPKGLPFSVLNK 600 Query: 596 ALKKKEISKLINTSFRKCGLRATVVFADQLMQSGFRLATRAGISICVDDMLVPPQKATLI 655 LKKKEIS+LINT+FRKCGLR TV+FAD+L+QSGFRLATRAGISI +DDMLVPP K +I Sbjct: 601 PLKKKEISRLINTAFRKCGLRETVIFADKLLQSGFRLATRAGISIAIDDMLVPPAKEKII 660 Query: 656 AAAESEVKQIEQQYSSGLVTAGERYNKVVDIWGKAGDEVGKAMMDQLKVEDVITREGKKT 715 + A ++VK+ ++QY SGLVT ERYN VVDIWG AGD+VGKAMM+QL+ EDV+ R GK Sbjct: 661 SEAAAKVKEYDKQYMSGLVTDQERYNNVVDIWGAAGDQVGKAMMEQLQTEDVVDRHGKTV 720 Query: 716 TQESFNAIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFI 775 QESFN+IYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFI Sbjct: 721 KQESFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFI 780 Query: 776 STHGARKGLADTALKTANSGYLTRRLVDVTQDLVVIEDDCGTSNGSAMKALVEGGEVIEA 835 STHGARKGLADTALKTANSGYLTRRLVDVTQDLVV+EDDCGTSNG AMKALVEGGEVIEA Sbjct: 781 STHGARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSNGVAMKALVEGGEVIEA 840 Query: 836 LRDRILGRVAATDIVNPEDQSTLFEAGTLLDEDKVEEIERMGIDEVKVRTPLTCDTRYGL 895 LRDRILGRV D+VNPE Q T EAGTLLDED VE I+ +G+DEVKVRTPLTCDTRYGL Sbjct: 841 LRDRILGRVVVNDVVNPETQETAIEAGTLLDEDLVELIDSIGVDEVKVRTPLTCDTRYGL 900 Query: 896 CAKCYGRDLGRGLLVNSGEAVGVVAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKS 955 CAKCYGRDLGRG+LVNSGEAVGV+AAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAK+ Sbjct: 901 CAKCYGRDLGRGVLVNSGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKA 960 Query: 956 NGTVRFTATMRYVTNGKGEQIVISRSGEVLITDDLGRERERHKVPYGATLIVKDGLTIKA 1015 GTVRFTATMRYVTN KGEQIVISRSGE LITDD GRERERHK+PYGATL+V DG +IKA Sbjct: 961 TGTVRFTATMRYVTNAKGEQIVISRSGEALITDDHGRERERHKIPYGATLLVHDGQSIKA 1020 Query: 1016 GTALATWDPLTRPIITEYSGTVKFENVEEGSTVAKQIDEVTGLSTLVVIDAKRRGSSSKV 1075 GT LATWDPLTRPII+EYSGT+KFENVEEG TVAKQ+DEVTGLSTLVVIDAKRR S+SK Sbjct: 1021 GTQLATWDPLTRPIISEYSGTIKFENVEEGVTVAKQMDEVTGLSTLVVIDAKRRTSASKG 1080 Query: 1076 MRPQVKLLNEQGEEVKIAGTEHSVTIGFQVGALITVKDGQQVHVGEVLARIPTESQKTRD 1135 +RPQVKLL+ G EVKI GT+HSVTIGFQVGALITVKDGQQVHVGEVLARIPTESQKTRD Sbjct: 1081 IRPQVKLLDSSGAEVKIPGTDHSVTIGFQVGALITVKDGQQVHVGEVLARIPTESQKTRD 1140 Query: 1136 ITGGLPRVAELFEARSPKDAGMLAEVTGTVAFGKETKGKQRLEITDMEGTKHEFLITKDK 1195 ITGGLPRVAELFEARSPKDA +LAEVTGT +FGK+TKGKQRL ITD++G HEFLI K+K Sbjct: 1141 ITGGLPRVAELFEARSPKDAAVLAEVTGTTSFGKDTKGKQRLVITDLDGNAHEFLIAKEK 1200 Query: 1196 QVLVHDGQVVNKGEMIVDGPADPQDILRLLGIEALARYIVDEVQDVYRLQGVKINDKHIE 1255 QVLVHDGQVVNKGEMIV+GPADP DILRL G+E LA YIVDEVQDVYRLQGVKINDKHIE Sbjct: 1201 QVLVHDGQVVNKGEMIVEGPADPHDILRLKGVEELATYIVDEVQDVYRLQGVKINDKHIE 1260 Query: 1256 VIVRQMLRRVQVVEPGDTNYITGEQVERSELLDENDRVTAEGKIPATYENVLLGITKASL 1315 VIVRQMLRRVQ+V+ GDT +I GEQVERSELLDEND+V AEGK PATYEN+LLGITKASL Sbjct: 1261 VIVRQMLRRVQIVDVGDTKFIPGEQVERSELLDENDKVIAEGKRPATYENLLLGITKASL 1320 Query: 1316 STDSFISAASFQETTRVLTEAAIMGKKDGLRGLKENVIVGRLIPAGTGLAFHRARKEKD 1374 STDSFISAASFQETTRVLTEAAIMGK D LRGLKENVIVGRLIPAGTGLA+HRARK K+ Sbjct: 1321 STDSFISAASFQETTRVLTEAAIMGKVDDLRGLKENVIVGRLIPAGTGLAYHRARKAKE 1379 >NMB0133 [K] COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit Nme Neisseria meningitidis MC58 Length = 1391 Score = 2177 bits (5642), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1069/1382 (77%), Positives = 1207/1382 (87%), Gaps = 7/1382 (0%) Query: 4 LLDLFKQVQ---QNEQFDAIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCAK 60 LL+LF +Q E+FDAIKIG+ASP+ IRSWS+GEVKKPETINYRTFKPERDGLFCAK Sbjct: 3 LLNLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPETINYRTFKPERDGLFCAK 62 Query: 61 IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPTAHIWFLKSL 120 IFGP+KDYECLCGKYKRLK +GV CEKCGVEVTL+KVRRERMGHIELA+P AHIWFLKSL Sbjct: 63 IFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRERMGHIELAAPVAHIWFLKSL 122 Query: 121 PSRLGMVLDMTLRDIERVLYFEAYVVTDPGMTPLKKCQIMSEDDYAAKYEEYGDDFIAFM 180 PSRLGMVLDMTLRDIERVLYFEA+VVTDPGMTPL++ Q+++EDDY K +EYGDDF A M Sbjct: 123 PSRLGMVLDMTLRDIERVLYFEAFVVTDPGMTPLQRRQLLTEDDYYNKLDEYGDDFDAKM 182 Query: 181 GAEGIRELLRSIDIDREAETLRQELKDSKSEAKIKKYAKRLKVLEAFQRSGIKPEWMIME 240 GAEGIRELLR++++ E E LRQEL+ + S+ KIKK AKRLKVLEAF RSG+K EWMIM+ Sbjct: 183 GAEGIRELLRTLNVAGEIEILRQELESTGSDTKIKKIAKRLKVLEAFHRSGMKLEWMIMD 242 Query: 241 VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPEIITRNEKRMLQ 300 VLPVLPP+LRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRL+EL AP+II RNEKRMLQ Sbjct: 243 VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELHAPDIIVRNEKRMLQ 302 Query: 301 EAVDSLLDNGRRGKAMTGANKRPLKSLAEMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQ 360 EAVDSLLDNGRRGKAMTGANKRPLKSLA+MIKGKGGRFRQNLLGKRVDYSGRSVI VGP Sbjct: 303 EAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVITVGPY 362 Query: 361 LKLHQCGLPKLMALELFKPFIFNKLELMGLSTTIKAAKKLVEAQEPVVWDILEEVIREHP 420 L+LHQCGLPK MALELFKPFIF+KLE GL++T+KAAKKLVE + P VWDILEEVIREHP Sbjct: 363 LRLHQCGLPKKMALELFKPFIFHKLEKQGLASTVKAAKKLVEQEVPEVWDILEEVIREHP 422 Query: 421 VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSIEAQMEA 480 +MLNRAPTLHRLGIQAFEP+LIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLS+EAQMEA Sbjct: 423 IMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEA 482 Query: 481 RTLMLASNNILFPSNGEPSIVPSQDIVLGLYYATREAINGKNEGMMFQDVSEVIRAYDNK 540 RTLMLASNN+L P+NGEP IVPSQDIVLGLYY TR+ IN K EG +F DV EV RAY K Sbjct: 483 RTLMLASNNVLSPANGEPIIVPSQDIVLGLYYMTRDRINAKGEGSLFADVKEVHRAYHTK 542 Query: 541 EVELATRITVRIVEHPKDPVTGEFVRTVKRYETTIGRAILSEILPKGLPFSVLNRALKKK 600 +VEL T+ITVR+ E K+ GEF V RYETT+GRA+LSEILPKGLPF +N+ALKKK Sbjct: 543 QVELGTKITVRLREWVKNE-AGEFEPVVNRYETTVGRALLSEILPKGLPFEYVNKALKKK 601 Query: 601 EISKLINTSFRKCGLRATVVFADQLMQSGFRLATRAGISICVDDMLVPPQKATLIAAAES 660 EISKLIN SFR CGLR TV+FAD LM +GF A + GISI VDDM +P +KA L+A A + Sbjct: 602 EISKLINASFRLCGLRDTVIFADHLMYTGFGFAAKGGISIAVDDMEIPKEKAALLAEANA 661 Query: 661 EVKQIEQQYSSGLVTAGERYNKVVDIWGKAGDEVGKAMMDQLKVEDVITREGKKTTQESF 720 EVK+IE QY GLVT GERYNKVVDIWG+AGD++ KAMMD L + VI R G + QESF Sbjct: 662 EVKEIEDQYRQGLVTNGERYNKVVDIWGRAGDKIAKAMMDNLSKQKVIDRAGNEVDQESF 721 Query: 721 NAIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGA 780 N+IYMMADSGARGSAAQI+QL+GMRGLMAKPDGSIIETPIT+NFREGL VLQYFI+THGA Sbjct: 722 NSIYMMADSGARGSAAQIKQLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHGA 781 Query: 781 RKGLADTALKTANSGYLTRRLVDVTQDLVVIEDDCGTSNGSAMKALVEGGEVIEALRDRI 840 RKGLADTALKTANSGYLTRRLVDVTQDLVV+EDDCGTS+G MKA+V+GG+VIEALRDRI Sbjct: 782 RKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRDRI 841 Query: 841 LGRVAATDIVNPEDQSTLFEAGTLLDEDKVEEIERMGIDEVKVRTPLTCDTRYGLCAKCY 900 LGRV A+D+V+P TL EAGTLL E V+ I++ G+DEVKVRTP+TC TR+GLCA CY Sbjct: 842 LGRVTASDVVDPSSGETLVEAGTLLTEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAHCY 901 Query: 901 GRDLGRGLLVNSGEAVGVVAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSNGTVR 960 GRDL RG LVN+GEAVGV+AAQSIGEPGTQLTMRTFHIGGAASRAA AS VEAKSNGT R Sbjct: 902 GRDLARGKLVNAGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTAR 961 Query: 961 FTATMRYVTNGKGEQIVISRSGEVLITDDLGRERERHKVPYGATLIVKDGLTIKAGTALA 1020 F++ MRYV N KGE +VI RS EV+I DD+GRERERHKVPYGA L+V+DG+ IKAG LA Sbjct: 962 FSSQMRYVANNKGELVVIGRSCEVVIHDDIGRERERHKVPYGAILLVQDGMAIKAGQTLA 1021 Query: 1021 TWDPLTRPIITEYSGTVKFENVEEGSTVAKQIDEVTGLSTLVVIDAKRRGSS-SKVMRPQ 1079 TWDP TRP+ITE++G VKFENVEEG TVAKQ D+VTGLSTLVVID KRR SS SK++RP Sbjct: 1022 TWDPHTRPMITEHAGMVKFENVEEGVTVAKQTDDVTGLSTLVVIDGKRRSSSASKLLRPT 1081 Query: 1080 VKLLNEQGEEVKIAGTEHSVTIGFQVGALITVKDGQQVHVGEVLARIPTESQKTRDITGG 1139 VKLL+E G E+ I GT V++ F VGA+ITV++GQ++ G+VLARIP S KTRDITGG Sbjct: 1082 VKLLDENGVEICIPGTSTPVSMAFPVGAVITVREGQEIGKGDVLARIPQASSKTRDITGG 1141 Query: 1140 LPRVAELFEARSPKDAGMLAEVTGTVAFGKETKGKQRLEITDMEGTKHEFLITKDKQVLV 1199 LPRVAELFEAR PKDAGMLAE+TGTV+FGKETKGKQRL +TD++G +E LI+K+KQ+LV Sbjct: 1142 LPRVAELFEARVPKDAGMLAEITGTVSFGKETKGKQRLIVTDVDGVAYETLISKEKQILV 1201 Query: 1200 HDGQVVNKGEMIVDGPADPQDILRLLGIEALARYIVDEVQDVYRLQGVKINDKHIEVIVR 1259 HDGQVVN+GE IVDG DP DILRL GIEALARYIV EVQ+VYRLQGVKI+DKHIEVI+R Sbjct: 1202 HDGQVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVIIR 1261 Query: 1260 QMLRRVQVVEPGDTNYITGEQVERSELLDENDRVTAEGKIPATYENVLLGITKASLSTDS 1319 QMLRRV + + G+T +ITGEQVER +++ N++ EGK PA YENVLLGITKASLSTDS Sbjct: 1262 QMLRRVNIADAGETGFITGEQVERGDVMAANEKALEEGKEPARYENVLLGITKASLSTDS 1321 Query: 1320 FISAASFQETTRVLTEAAIMGKKDGLRGLKENVIVGRLIPAGTGLAFHRARKEKDAWEAE 1379 FISAASFQETTRVLTEAAIMGK+D LRGLKENVIVGRLIPAGTGL +HR+R ++ W+ Sbjct: 1322 FISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRSRHQQ--WQEV 1379 Query: 1380 ER 1381 E+ Sbjct: 1380 EQ 1381 >NMA0141 [K] COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit NmA Neisseria meningitidis Z2491 Length = 1391 Score = 2177 bits (5642), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1069/1382 (77%), Positives = 1208/1382 (87%), Gaps = 7/1382 (0%) Query: 4 LLDLFKQVQ---QNEQFDAIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCAK 60 LL+LF +Q E+FDAIKIG+ASP+ IRSWS+GEVKKPETINYRTFKPERDGLFCAK Sbjct: 3 LLNLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPETINYRTFKPERDGLFCAK 62 Query: 61 IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPTAHIWFLKSL 120 IFGP+KDYECLCGKYKRLK +GV CEKCGVEVTL+KVRRERMGHIELA+P AHIWFLKSL Sbjct: 63 IFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRERMGHIELAAPVAHIWFLKSL 122 Query: 121 PSRLGMVLDMTLRDIERVLYFEAYVVTDPGMTPLKKCQIMSEDDYAAKYEEYGDDFIAFM 180 PSRLGMVLDMTLRDIERVLYFEA+VVTDPGMTPL++ Q+++EDDY K +EYGDDF A M Sbjct: 123 PSRLGMVLDMTLRDIERVLYFEAFVVTDPGMTPLQRRQLLTEDDYYNKLDEYGDDFDAKM 182 Query: 181 GAEGIRELLRSIDIDREAETLRQELKDSKSEAKIKKYAKRLKVLEAFQRSGIKPEWMIME 240 GAEGIRELLR++++ E E LRQEL+ + S+ KIKK AKRLKVLEAF RSG+K EWMIM+ Sbjct: 183 GAEGIRELLRTLNVAGEIEILRQELESTGSDTKIKKIAKRLKVLEAFHRSGMKLEWMIMD 242 Query: 241 VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPEIITRNEKRMLQ 300 VLPVLPP+LRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRL+EL AP+II RNEKRMLQ Sbjct: 243 VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELHAPDIIVRNEKRMLQ 302 Query: 301 EAVDSLLDNGRRGKAMTGANKRPLKSLAEMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQ 360 EAVDSLLDNGRRGKAMTGANKRPLKSLA+MIKGKGGRFRQNLLGKRVDYSGRSVI VGP Sbjct: 303 EAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVITVGPY 362 Query: 361 LKLHQCGLPKLMALELFKPFIFNKLELMGLSTTIKAAKKLVEAQEPVVWDILEEVIREHP 420 L+LHQCGLPK MALELFKPFIF+KLE GL++T+KAAKKLVE + P VWDILEEVIREHP Sbjct: 363 LRLHQCGLPKKMALELFKPFIFHKLEKQGLASTVKAAKKLVEQEVPEVWDILEEVIREHP 422 Query: 421 VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSIEAQMEA 480 +MLNRAPTLHRLGIQAFEP+LIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLS+EAQMEA Sbjct: 423 IMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEA 482 Query: 481 RTLMLASNNILFPSNGEPSIVPSQDIVLGLYYATREAINGKNEGMMFQDVSEVIRAYDNK 540 RTLMLASNN+L P+NGEP IVPSQDIVLGLYY TR+ IN K EG +F DV EV RAY K Sbjct: 483 RTLMLASNNVLSPANGEPIIVPSQDIVLGLYYMTRDRINAKGEGSLFADVKEVHRAYHTK 542 Query: 541 EVELATRITVRIVEHPKDPVTGEFVRTVKRYETTIGRAILSEILPKGLPFSVLNRALKKK 600 +VEL T+ITVR+ E K+ GEF V RYETT+GRA+LSEILPKGLPF +N+ALKKK Sbjct: 543 QVELGTKITVRLREWVKNE-AGEFEPVVNRYETTVGRALLSEILPKGLPFEYVNKALKKK 601 Query: 601 EISKLINTSFRKCGLRATVVFADQLMQSGFRLATRAGISICVDDMLVPPQKATLIAAAES 660 EISKLIN SFR CGLR TV+FAD LM +GF A + GISI VDDM +P +KA L+A A + Sbjct: 602 EISKLINASFRLCGLRDTVIFADHLMYTGFGFAAKGGISIAVDDMEIPKEKAALLAEANA 661 Query: 661 EVKQIEQQYSSGLVTAGERYNKVVDIWGKAGDEVGKAMMDQLKVEDVITREGKKTTQESF 720 EVK+IE QY GLVT GERYNKVVDIWG+AGD++ KAMMD L + VI R+G + QESF Sbjct: 662 EVKEIEDQYRQGLVTNGERYNKVVDIWGRAGDKIAKAMMDNLSKQKVIDRDGNEVDQESF 721 Query: 721 NAIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGA 780 N+IYMMADSGARGSAAQI+QL+GMRGLMAKPDGSIIETPIT+NFREGL VLQYFI+THGA Sbjct: 722 NSIYMMADSGARGSAAQIKQLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHGA 781 Query: 781 RKGLADTALKTANSGYLTRRLVDVTQDLVVIEDDCGTSNGSAMKALVEGGEVIEALRDRI 840 RKGLADTALKTANSGYLTRRLVDVTQDLVV+EDDCGTS+G MKA+V+GG+VIEALRDRI Sbjct: 782 RKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRDRI 841 Query: 841 LGRVAATDIVNPEDQSTLFEAGTLLDEDKVEEIERMGIDEVKVRTPLTCDTRYGLCAKCY 900 LGRV A+D+V+P TL EAGTLL E V+ I++ G+DEVKVRTP+TC TR+GLCA CY Sbjct: 842 LGRVTASDVVDPSSGETLVEAGTLLTEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAHCY 901 Query: 901 GRDLGRGLLVNSGEAVGVVAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSNGTVR 960 GRDL RG LVN+GEAVGV+AAQSIGEPGTQLTMRTFHIGGAASRAA AS VEAKSNGT R Sbjct: 902 GRDLARGKLVNAGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTAR 961 Query: 961 FTATMRYVTNGKGEQIVISRSGEVLITDDLGRERERHKVPYGATLIVKDGLTIKAGTALA 1020 F++ MRYV N KGE +VI RS EV+I DD+GRERERHKVPYGA L+V+DG+ IKAG LA Sbjct: 962 FSSQMRYVANNKGELVVIGRSCEVVIHDDIGRERERHKVPYGAILLVQDGMAIKAGQTLA 1021 Query: 1021 TWDPLTRPIITEYSGTVKFENVEEGSTVAKQIDEVTGLSTLVVIDAKRRGSS-SKVMRPQ 1079 TWDP TRP+ITE++G VKFENVEEG TVAKQ D+VTGLSTLVVID KRR SS SK++RP Sbjct: 1022 TWDPHTRPMITEHAGMVKFENVEEGVTVAKQTDDVTGLSTLVVIDGKRRSSSASKLLRPT 1081 Query: 1080 VKLLNEQGEEVKIAGTEHSVTIGFQVGALITVKDGQQVHVGEVLARIPTESQKTRDITGG 1139 VKLL+E G E+ I GT V++ F VGA+ITV++GQ++ G+VLARIP S KTRDITGG Sbjct: 1082 VKLLDENGVEICIPGTSTPVSMAFPVGAVITVREGQEIGKGDVLARIPQASSKTRDITGG 1141 Query: 1140 LPRVAELFEARSPKDAGMLAEVTGTVAFGKETKGKQRLEITDMEGTKHEFLITKDKQVLV 1199 LPRVAELFEAR PKDAGMLAE+TGTV+FGKETKGKQRL +TD++G +E LI+K+KQ+LV Sbjct: 1142 LPRVAELFEARVPKDAGMLAEITGTVSFGKETKGKQRLIVTDVDGVAYETLISKEKQILV 1201 Query: 1200 HDGQVVNKGEMIVDGPADPQDILRLLGIEALARYIVDEVQDVYRLQGVKINDKHIEVIVR 1259 HDGQVVN+GE IVDG DP DILRL GIEALARYIV EVQ+VYRLQGVKI+DKHIEVI+R Sbjct: 1202 HDGQVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVIIR 1261 Query: 1260 QMLRRVQVVEPGDTNYITGEQVERSELLDENDRVTAEGKIPATYENVLLGITKASLSTDS 1319 QMLRRV + + G+T +ITGEQVER +++ N++ EGK PA YENVLLGITKASLSTDS Sbjct: 1262 QMLRRVNIADAGETGFITGEQVERGDVMAANEKALEEGKEPARYENVLLGITKASLSTDS 1321 Query: 1320 FISAASFQETTRVLTEAAIMGKKDGLRGLKENVIVGRLIPAGTGLAFHRARKEKDAWEAE 1379 FISAASFQETTRVLTEAAIMGK+D LRGLKENVIVGRLIPAGTGL +HR+R ++ W+ Sbjct: 1322 FISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRSRHQQ--WQGV 1379 Query: 1380 ER 1381 E+ Sbjct: 1380 EQ 1381 >PA4269 [K] COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit Pae Pseudomonas aeruginosa Length = 1399 Score = 1952 bits (5057), Expect = 0.0, Method: Compositional matrix adjust. Identities = 940/1391 (67%), Positives = 1137/1391 (81%), Gaps = 3/1391 (0%) Query: 1 MKALLDLFKQVQQNEQFDAIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCAK 60 MK LL+L K Q E+FDAI+IGLASP+ IRSWSFGEVKKPETINYRTFKPERDGLFCAK Sbjct: 1 MKDLLNLLKNQGQIEEFDAIRIGLASPEMIRSWSFGEVKKPETINYRTFKPERDGLFCAK 60 Query: 61 IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPTAHIWFLKSL 120 IFGP+KDYECLCGKYKRLKHRGVICEKCGVEV LAKVRRERMGHIELASP AHIWFLKSL Sbjct: 61 IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVALAKVRRERMGHIELASPVAHIWFLKSL 120 Query: 121 PSRLGMVLDMTLRDIERVLYFEAYVVTDPGMTPLKKCQIMSEDDYAAKYEEYGDDFIAFM 180 PSR+G++LDMTLRDIERVLYFE+YVV DPGMT L+K Q+++++ Y EE+GDDF A M Sbjct: 121 PSRIGLLLDMTLRDIERVLYFESYVVIDPGMTTLEKGQLLNDEQYFEALEEFGDDFDARM 180 Query: 181 GAEGIRELLRSIDIDREAETLRQELKDSKSEAKIKKYAKRLKVLEAFQRSGIKPEWMIME 240 GAE + ELL +ID++ E LR+E+ + SE KIKK +KRLK++EAFQ SG KPEWM++ Sbjct: 181 GAEAVHELLNAIDLEHEIGRLREEIPQTNSETKIKKLSKRLKLMEAFQGSGNKPEWMVLT 240 Query: 241 VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPEIITRNEKRMLQ 300 VLPVLPP+LRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRL++L AP+II RNEKRMLQ Sbjct: 241 VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ 300 Query: 301 EAVDSLLDNGRRGKAMTGANKRPLKSLAEMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQ 360 EAVD+LLDNGRRG+A+TG+NKRPLKSLA+MIKGK GRFRQNLLGKRVDYSGRSVI VGP Sbjct: 301 EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPT 360 Query: 361 LKLHQCGLPKLMALELFKPFIFNKLELMGLSTTIKAAKKLVEAQEPVVWDILEEVIREHP 420 L+LHQCGLPK MALELFKPFIF KLE G++TTIKAAKK+VE + P VWD+L EVIREHP Sbjct: 361 LRLHQCGLPKKMALELFKPFIFGKLEGRGMATTIKAAKKMVERELPEVWDVLAEVIREHP 420 Query: 421 VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSIEAQMEA 480 V+LNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAA+NADFDGDQMAVHVPL++EAQ+EA Sbjct: 421 VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA 480 Query: 481 RTLMLASNNILFPSNGEPSIVPSQDIVLGLYYATREAINGKNEGMMFQDVSEVIRAYDNK 540 R LM+++NNIL P+NGEP IVPSQD+V+GLYY TREAIN K EGM F D+ EV RAY + Sbjct: 481 RALMMSTNNILSPANGEPIIVPSQDVVMGLYYMTREAINAKGEGMAFADLQEVDRAYRSG 540 Query: 541 EVELATRITVRIVEHPKDPVTGEFVRTVKRYETTIGRAILSEILPKGLPFSVLNRALKKK 600 + L R+ VRI E K G+ + +TT+GRA+L +++P GLPF V+N+++KKK Sbjct: 541 QASLHARVKVRINEKIKGE-DGQLTANTRIVDTTVGRALLFQVVPAGLPFDVVNQSMKKK 599 Query: 601 EISKLINTSFRKCGLRATVVFADQLMQSGFRLATRAGISICVDDMLVPPQKATLIAAAES 660 ISKLIN +R GL+ TV+FADQLM +GF +T +G+SI V+D ++P +KA +I AA Sbjct: 600 AISKLINHCYRVVGLKDTVIFADQLMYTGFAYSTISGVSIGVNDFVIPDEKARIINAATD 659 Query: 661 EVKQIEQQYSSGLVTAGERYNKVVDIWGKAGDEVGKAMMDQLKVEDVITREGKKTTQESF 720 EVK+IE QY+SGLVT GE+YNKV+D+W KA DEV KAMM L E V+ REGK+ QESF Sbjct: 660 EVKEIESQYASGLVTQGEKYNKVIDLWSKANDEVSKAMMANLSKEKVVDREGKEVDQESF 719 Query: 721 NAIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGA 780 N++YMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGA Sbjct: 720 NSMYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGA 779 Query: 781 RKGLADTALKTANSGYLTRRLVDVTQDLVVIEDDCGTSNGSAMKALVEGGEVIEALRDRI 840 RKGLADTALKTANSGYLTRRLVDV QDLVV E DCGT +G M +EGG+V+E L +R+ Sbjct: 780 RKGLADTALKTANSGYLTRRLVDVAQDLVVTEIDCGTEHGLLMSPHIEGGDVVEPLGERV 839 Query: 841 LGRVAATDIVNPEDQSTLFEAGTLLDEDKVEEIERMGIDEVKVRTPLTCDTRYGLCAKCY 900 LGRV A D+ P + AGTL+DE V+ +E M +DEV VR+P+TC+TR+G+CA CY Sbjct: 840 LGRVIARDVFKPGSDEVIVPAGTLIDEKWVDFLEVMSVDEVVVRSPITCETRHGICAMCY 899 Query: 901 GRDLGRGLLVNSGEAVGVVAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSNGTVR 960 GRDL RG VN GEAVGV+AAQSIGEPGTQLTMRTFHIGGAASR + A +V+ K+ GT+R Sbjct: 900 GRDLARGHRVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRTSAADNVQVKNGGTIR 959 Query: 961 FTATMRYVTNGKGEQIVISRSGEVLITDDLGRERERHKVPYGATLIVKDGLTIKAGTALA 1020 +++V G + +SRSGE+ + DD GRERER+K+PYGA + VK+G + G +A Sbjct: 960 LH-NLKHVVRADGALVAVSRSGELAVADDFGRERERYKLPYGAVISVKEGDKVDPGAIVA 1018 Query: 1021 TWDPLTRPIITEYSGTVKFENVEEGSTVAKQIDEVTGLSTLVVIDAKRRGSSSKVMRPQV 1080 WDP T PI+TE GTV F +EEG TV +Q DE+TGL+ + V+D K R ++ K +RP V Sbjct: 1019 KWDPHTHPIVTEVDGTVAFVGMEEGITVKRQTDELTGLTNIEVMDPKDRPAAGKDIRPAV 1078 Query: 1081 KLLNEQGEEVKIAGTEHSVTIGFQVGALITVKDGQQVHVGEVLARIPTESQKTRDITGGL 1140 KL++ G+++ + GT+ AL+ + DG +V +G+V+ARIP E+ KTRDITGGL Sbjct: 1079 KLIDAAGKDLLLPGTDVPAQYFLPANALVNLTDGAKVSIGDVVARIPQETSKTRDITGGL 1138 Query: 1141 PRVAELFEARSPKDAGMLAEVTGTVAFGKETKGKQRLEITDMEGTK-HEFLITKDKQVLV 1199 PRVA+LFEAR PK+ +LAE++GT++FGKETKGK+RL IT +G+ +E LI K + + V Sbjct: 1139 PRVADLFEARRPKEPSILAEISGTISFGKETKGKRRLVITPNDGSDPYEELIPKWRHLNV 1198 Query: 1200 HDGQVVNKGEMIVDGPADPQDILRLLGIEALARYIVDEVQDVYRLQGVKINDKHIEVIVR 1259 +G+ VN+GE+I DGP++P DILRLLG+ +LA+YIV+E+QDVYRLQGVKINDKHIE I+R Sbjct: 1199 FEGEQVNRGEVISDGPSNPHDILRLLGVSSLAKYIVNEIQDVYRLQGVKINDKHIETILR 1258 Query: 1260 QMLRRVQVVEPGDTNYITGEQVERSELLDENDRVTAEGKIPATYENVLLGITKASLSTDS 1319 QMLR+V+V E GD+++I G+QVE +++L+EN+++ E K PA YE VLLGITKASLST+S Sbjct: 1259 QMLRKVEVSESGDSSFIKGDQVELTQVLEENEQLGTEDKFPAKYERVLLGITKASLSTES 1318 Query: 1320 FISAASFQETTRVLTEAAIMGKKDGLRGLKENVIVGRLIPAGTGLAFHRARKEKDAWEAE 1379 FISAASFQETTRVLTEAA+ GK+D LRGLKENV+VGRLIPAGTGLA+H RK + Sbjct: 1319 FISAASFQETTRVLTEAAVTGKRDFLRGLKENVVVGRLIPAGTGLAYHSERKRQRDLGKP 1378 Query: 1380 ERAALLEAERA 1390 +R + EAE A Sbjct: 1379 QRVSASEAEAA 1389 >XF2632 [K] COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit Xfa Xylella fastidiosa 9a5c Length = 1430 Score = 1881 bits (4873), Expect = 0.0, Method: Compositional matrix adjust. Identities = 904/1372 (65%), Positives = 1105/1372 (80%), Gaps = 3/1372 (0%) Query: 1 MKALLDLFKQVQQNEQFDAIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCAK 60 MK LL+LF Q +Q FDAIKIGLASP IRSWSFGEVKKPETINYRTFKPERDGLFCA Sbjct: 24 MKDLLNLFNQQRQTLDFDAIKIGLASPALIRSWSFGEVKKPETINYRTFKPERDGLFCAA 83 Query: 61 IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPTAHIWFLKSL 120 IFGPIKDYECLCGKYKR+KHRGV+CEKCG EVTLAKVRRERMG IELASP AHIWFLKSL Sbjct: 84 IFGPIKDYECLCGKYKRMKHRGVVCEKCGTEVTLAKVRRERMGSIELASPVAHIWFLKSL 143 Query: 121 PSRLGMVLDMTLRDIERVLYFEAYVVTDPGMTPLKKCQIMSEDDYAAKYEEYGDDFIAFM 180 PSR+G++LDMTLRDIERVLYFEAYVVT+PG+TPL++ Q+++E+ Y +E+ DDF A M Sbjct: 144 PSRIGLMLDMTLRDIERVLYFEAYVVTEPGLTPLERRQLLTEEQYLQARQEHADDFDATM 203 Query: 181 GAEGIRELLRSIDIDREAETLRQELKDSKSEAKIKKYAKRLKVLEAFQRSGIKPEWMIME 240 GAE + ELLR ID+ E LR+E+ + SE K+K+ KR+K++EAF SG +PEWMI+ Sbjct: 204 GAEAVYELLRMIDLQSEMARLREEIVVTGSETKLKRLTKRIKLIEAFIESGNRPEWMILT 263 Query: 241 VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPEIITRNEKRMLQ 300 VLPVLPP+LRPLVPLDGGRFATSDLNDLYRRVINRNNRL RL+EL AP+II RNEKRMLQ Sbjct: 264 VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLCRLLELSAPDIIVRNEKRMLQ 323 Query: 301 EAVDSLLDNGRRGKAMTGANKRPLKSLAEMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQ 360 E+VD+LLDNGRRG+A+TG NKRPLKSLA+MIKGK GRFRQNLLGKRVDYS RSVI+VGP Sbjct: 324 ESVDALLDNGRRGRAITGTNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSARSVIIVGPN 383 Query: 361 LKLHQCGLPKLMALELFKPFIFNKLELMGLSTTIKAAKKLVEAQEPVVWDILEEVIREHP 420 L+LHQCGLPK MALELFKPF+F KL+ GL+TTIKAAKKLVE +E VWDILEEVI EHP Sbjct: 384 LRLHQCGLPKKMALELFKPFVFAKLQRRGLATTIKAAKKLVEREEAEVWDILEEVISEHP 443 Query: 421 VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSIEAQMEA 480 V+LNRAPTLHR GIQAFEPVLIEGKAIQLHPLVC AFNADFDGDQMAVHVPLS+EAQ+EA Sbjct: 444 VVLNRAPTLHRQGIQAFEPVLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLEA 503 Query: 481 RTLMLASNNILFPSNGEPSIVPSQDIVLGLYYATREAINGKNEGMMFQDVSEVIRAYDNK 540 R LM+++NNIL P+NGEP IVPSQD+VLGLYY +R N K EGM+F + SE+ RAYDN Sbjct: 504 RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMSRALENKKGEGMVFANTSELKRAYDNS 563 Query: 541 EVELATRITVRIVEHPKDPVTGEFVRTVKRYETTIGRAILSEILPKGLPFSVLNRALKKK 600 VEL ++ VRI E D G + +TT+GRA+LSEILP+GLPF ++N + KK Sbjct: 564 VVELHAKVKVRITEIETDD-RGLRSKASLIVDTTVGRALLSEILPEGLPFVLVNTEMTKK 622 Query: 601 EISKLINTSFRKCGLRATVVFADQLMQSGFRLATRAGISICVDDMLVPPQKATLIAAAES 660 IS+LIN+S+R GL+ TVVFAD+LM +G+ ATRAG+SIC+DDML+P +K ++ AE Sbjct: 623 NISRLINSSYRMLGLKDTVVFADKLMYTGYAYATRAGVSICIDDMLIPIEKKEILGEAEQ 682 Query: 661 EVKQIEQQYSSGLVTAGERYNKVVDIWGKAGDEVGKAMMDQLKVEDVITREGKKTTQESF 720 EV +I++QY SGLVTAGERYNKVVDIW + + + KAMMD + E V+ +G+ Q+S Sbjct: 683 EVLEIQEQYQSGLVTAGERYNKVVDIWSRTNERIAKAMMDTIGTEKVVNTDGEIVDQKSM 742 Query: 721 NAIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGA 780 N++Y+MADSGARGS QIRQLA MRGLM +PDGSIIETPI ANFREGL+V +YF STHGA Sbjct: 743 NSLYIMADSGARGSPQQIRQLAAMRGLMVRPDGSIIETPIKANFREGLSVQEYFNSTHGA 802 Query: 781 RKGLADTALKTANSGYLTRRLVDVTQDLVVIEDDCGTSNGSAMKALVEGGEVIEALRDRI 840 RKGLADTALKTANSGYLTRRLVDVTQDL V++ DCGT+ G M +VEGG+V+E L+DR+ Sbjct: 803 RKGLADTALKTANSGYLTRRLVDVTQDLCVVQLDCGTAGGLTMTPIVEGGDVVEPLKDRV 862 Query: 841 LGRVAATDIVNP-EDQSTLFEAGTLLDEDKVEEIERMGIDEVKVRTPLTCDTRYGLCAKC 899 LGRV A D+ P D + TLLDE V ++E G+ VKVR+P+TC++ +G+CA C Sbjct: 863 LGRVVAEDVFLPGNDDEPIVTRSTLLDEQWVAKLEEAGVQSVKVRSPITCESPFGVCALC 922 Query: 900 YGRDLGRGLLVNSGEAVGVVAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSNGTV 959 YGRDL RG LVN GEAVGV+AAQSIGEPGTQLTMRTFHIGG A AA ++ K++G+V Sbjct: 923 YGRDLARGHLVNMGEAVGVIAAQSIGEPGTQLTMRTFHIGGTALSAAAVDNITVKTSGSV 982 Query: 960 RFTATMRYVTNGKGEQIVISRSGEVLITDDLGRERERHKVPYGATLIVKDGLTIKAGTAL 1019 +FT ++YV + G + +SRSGE+ + D GRERER+K+PYGAT+ VKD +K+G L Sbjct: 983 KFT-NLKYVEHVNGTLVAVSRSGEISVLDTHGRERERYKLPYGATINVKDMAEVKSGQIL 1041 Query: 1020 ATWDPLTRPIITEYSGTVKFENVEEGSTVAKQIDEVTGLSTLVVIDAKRRGSSSKVMRPQ 1079 A WDP PI++E +G V+F + +G TV ++ D++TGLS+ + D KRRGS K +RP Sbjct: 1042 ANWDPHNHPIVSEVAGFVRFIDFVDGVTVIEKTDDLTGLSSREIADLKRRGSQGKDLRPL 1101 Query: 1080 VKLLNEQGEEVKIAGTEHSVTIGFQVGALITVKDGQQVHVGEVLARIPTESQKTRDITGG 1139 V++++++G ++ I GT+ S +++ ++DG V +G+V+A+IP E+ KTRDITGG Sbjct: 1102 VRIVDKKGNDLTIPGTDLSAQYLLPPRSIVNLQDGAPVGIGDVVAKIPQEASKTRDITGG 1161 Query: 1140 LPRVAELFEARSPKDAGMLAEVTGTVAFGKETKGKQRLEITDMEGTKHEFLITKDKQVLV 1199 LPRVA+LFEAR PKD +LAE +G ++FGK+TKGKQRL I D +G++HE LI K +Q++V Sbjct: 1162 LPRVADLFEARRPKDPAILAERSGVISFGKDTKGKQRLIIKDADGSEHEELIPKYRQIIV 1221 Query: 1200 HDGQVVNKGEMIVDGPADPQDILRLLGIEALARYIVDEVQDVYRLQGVKINDKHIEVIVR 1259 +G+ V KGE IVDG PQDILRLLGIE LA Y+V E+QDVYRLQGVKINDKHIEVI R Sbjct: 1222 FEGEHVTKGETIVDGEPSPQDILRLLGIEPLAAYLVKEIQDVYRLQGVKINDKHIEVITR 1281 Query: 1260 QMLRRVQVVEPGDTNYITGEQVERSELLDENDRVTAEGKIPATYENVLLGITKASLSTDS 1319 QMLR+V++V+ G++ ++ GEQVER ++DEN ++ A ++PA Y VLLGITKASL+T+S Sbjct: 1282 QMLRKVEIVDQGNSKFLNGEQVERQRVIDENAKLIARNELPAKYNPVLLGITKASLATES 1341 Query: 1320 FISAASFQETTRVLTEAAIMGKKDGLRGLKENVIVGRLIPAGTGLAFHRARK 1371 FISAASFQETTRVLTEAA+ G +D LRGLKENVIVGRLIPAGTG +H R+ Sbjct: 1342 FISAASFQETTRVLTEAAVRGTRDNLRGLKENVIVGRLIPAGTGQRYHSQRR 1393