BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0093.p (204 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PM2000 [I] COG0558 Phosphatidylglycerophosphate synthase Pmu Pas... 217 2e-56 PA2541 [I] COG0558 Phosphatidylglycerophosphate synthase Pae Pse... 197 1e-50 YPO2817 [I] COG0558 Phosphatidylglycerophosphate synthase Ype Ye... 164 1e-40 Z2319 [I] COG0558 Phosphatidylglycerophosphate synthase EcZ Esch... 156 3e-38 ECs2010 [I] COG0558 Phosphatidylglycerophosphate synthase Ecs Es... 156 3e-38 >PM2000 [I] COG0558 Phosphatidylglycerophosphate synthase Pmu Pasteurella multocida Length = 218 Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 110/203 (54%), Positives = 145/203 (71%), Gaps = 3/203 (1%) Query: 2 ISIYQLKPRFQALLRPMVRALAHAGVTANAVTLLAMLISLALGAWLFMLGAQRPGW-FLL 60 +SIY LKP+FQ LLRP V LA GV+AN VTLLA IS+ LG LF+ W F+L Sbjct: 1 MSIYDLKPKFQNLLRPTVVKLAQRGVSANQVTLLACAISVVLG--LFLTALAEVHWLFIL 58 Query: 61 LPLWMFLRMALNAVDGMLAREFGQQSALGAYLNELSDVIADAALYLPFVLVAPFGWASVG 120 +P+W+F+RMALNA+DGMLAREF Q+S LG YLNE++DV++DAALYLPF + PF +G Sbjct: 59 IPIWLFIRMALNAIDGMLAREFHQKSRLGGYLNEITDVVSDAALYLPFACIFPFDPLLIG 118 Query: 121 SVIFLAAVSEMAGALGPMVGAPRQYAGPMGKSDRAFLFGALGLWLGLAGALPDWIFWALP 180 +I+LAA++E+ G LG + G R+Y GP+GKSDRAFLFG LGL LP+W++W Sbjct: 119 LIIWLAALTELCGILGQVQGQTRRYDGPLGKSDRAFLFGVLGLAYTFYAPLPEWLYWVAW 178 Query: 181 LAAVAILLNIVNRIRSGLAALPR 203 L + ++L + R+R+GLA LP Sbjct: 179 LVVLLLILTCIKRVRAGLAELPN 201 >PA2541 [I] COG0558 Phosphatidylglycerophosphate synthase Pae Pseudomonas aeruginosa Length = 211 Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 124/203 (61%), Positives = 144/203 (70%), Gaps = 5/203 (2%) Query: 1 MISIYQLKPRFQALLRPMVRALAHAGVTANAVTLLAMLISLALGAWLFMLGAQRPGW-FL 59 MIS+YQLKPRFQ LLRP V+ L G+TAN VTL A L+SL +GA + G W F Sbjct: 1 MISVYQLKPRFQNLLRPGVQRLYQRGITANQVTLAACLLSLLVGA--LVAGFASHLWLFA 58 Query: 60 LLPLWMFLRMALNAVDGMLAREFGQQSALGAYLNELSDVIADAALYLPFVLVAPFGWASV 119 L+PLWMFLRMALNAVDGMLAREFGQ+S LGAYLNEL+DVIAD+ LYLPF L+ V Sbjct: 59 LVPLWMFLRMALNAVDGMLAREFGQKSDLGAYLNELTDVIADSGLYLPFALLPGVNPLWV 118 Query: 120 GSVIFLAAVSEMAGALGPMVGAPRQYAGPMGKSDRAFLFGALGLWLGLAGALP-DWIFWA 178 V+ LA +SE AGALG MVGA R+Y GPMGKSDRA FG +G + +G LP WI W Sbjct: 119 VLVVLLAVISEYAGALGTMVGASRRYDGPMGKSDRALCFGVIGAGVA-SGLLPLAWIDWL 177 Query: 179 LPLAAVAILLNIVNRIRSGLAAL 201 + L A +LL I NR+R GLA L Sbjct: 178 MLLIAALLLLTIGNRVRQGLAEL 200 >YPO2817 [I] COG0558 Phosphatidylglycerophosphate synthase Ype Yersinia pestis Length = 200 Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 95/200 (47%), Positives = 129/200 (64%), Gaps = 8/200 (4%) Query: 2 ISIYQLKPRFQALLRPMVRALAHAGVTANAVTLLAMLISLALGAWLFMLGAQRPGWFLLL 61 +++Y +KP+FQ LLRP+V L GVTAN +TLLAML S+ LG WL +P F+ L Sbjct: 1 MTLYDIKPQFQNLLRPLVVRLHARGVTANQITLLAMLTSVLLGGWLICF--PQPVLFISL 58 Query: 62 PLWMFLRMALNAVDGMLAREFGQQSALGAYLNELSDVIADAALYLPFVLVAPFGWASVGS 121 P+++F RMALNA+DGMLAREF QQS LGA LNE+ D+I+DAALYL F ++ V Sbjct: 59 PVFLFFRMALNAIDGMLAREFNQQSTLGAILNEVGDIISDAALYLAFAFLSGVSPWLVIL 118 Query: 122 VIFLAAVSEMAGALGPMVGAPRQYAGPMGKSDRAFLFGALGLWLGLAGALPDWI-FWALP 180 V+ L+ ++E G + + R Y GP+GKSDRAF+ GALGL++ L P +I + Sbjct: 119 VVLLSWLTEFCGVIAQTLTGIRNYRGPLGKSDRAFVLGALGLFIAL---WPQYIGVTNIV 175 Query: 181 LAAVAILL--NIVNRIRSGL 198 A+LL +NR RS + Sbjct: 176 FGVTALLLVWTCINRCRSAI 195 >Z2319 [I] COG0558 Phosphatidylglycerophosphate synthase EcZ Escherichia coli O157:H7 EDL933 Length = 203 Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 97/202 (48%), Positives = 129/202 (63%), Gaps = 10/202 (4%) Query: 1 MISIYQLKPRFQALLRPMVRALAHAGVTANAVTLLAMLISLALGAWLFMLGAQRPGWFLL 60 ++++YQ+KP FQ+LLRP + L VTAN +TL A+ +SL G L ML AQ P FLL Sbjct: 2 IMTLYQIKPLFQSLLRPTMFWLYKHHVTANHITLAALALSLITGL-LLMLVAQ-PILFLL 59 Query: 61 LPLWMFLRMALNAVDGMLAREFGQQSALGAYLNELSDVIADAALYLPFVLVAPFGWASVG 120 LP+ +F+RMALNA+DGMLARE QQ+ LGA LNE DVI+D ALYLPF+ + + V Sbjct: 60 LPIVLFIRMALNALDGMLARECNQQTRLGAILNETGDVISDIALYLPFLFLPESNASLVI 119 Query: 121 SVIFLAAVSEMAGALGPMVGAPRQYAGPMGKSDRAFLFGALGLWLGLAGAL-PDWIFWA- 178 ++F ++E G L + R Y GP GKSDRA +F GLW GLA A+ P W+ W Sbjct: 120 LMLFCTILTEFCGLLAQTINGIRSYVGPFGKSDRALIF---GLW-GLAVAIYPQWMQWNN 175 Query: 179 --LPLAAVAILLNIVNRIRSGL 198 +A++ +L +NR RS L Sbjct: 176 LLWSIASILLLWTAINRCRSVL 197 >ECs2010 [I] COG0558 Phosphatidylglycerophosphate synthase Ecs Escherichia coli O157:H7 Length = 203 Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 97/202 (48%), Positives = 129/202 (63%), Gaps = 10/202 (4%) Query: 1 MISIYQLKPRFQALLRPMVRALAHAGVTANAVTLLAMLISLALGAWLFMLGAQRPGWFLL 60 ++++YQ+KP FQ+LLRP + L VTAN +TL A+ +SL G L ML AQ P FLL Sbjct: 2 IMTLYQIKPLFQSLLRPTMFWLYKHHVTANHITLAALALSLITGL-LLMLVAQ-PILFLL 59 Query: 61 LPLWMFLRMALNAVDGMLAREFGQQSALGAYLNELSDVIADAALYLPFVLVAPFGWASVG 120 LP+ +F+RMALNA+DGMLARE QQ+ LGA LNE DVI+D ALYLPF+ + + V Sbjct: 60 LPIVLFIRMALNALDGMLARECNQQTRLGAILNETGDVISDIALYLPFLFLPESNASLVI 119 Query: 121 SVIFLAAVSEMAGALGPMVGAPRQYAGPMGKSDRAFLFGALGLWLGLAGAL-PDWIFWA- 178 ++F ++E G L + R Y GP GKSDRA +F GLW GLA A+ P W+ W Sbjct: 120 LMLFCTILTEFCGLLAQTINGIRSYVGPFGKSDRALIF---GLW-GLAVAIYPQWMQWNN 175 Query: 179 --LPLAAVAILLNIVNRIRSGL 198 +A++ +L +NR RS L Sbjct: 176 LLWSIASILLLWTAINRCRSVL 197