BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0079.p (243 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ZyggH [R] COG0220 Predicted S-adenosylmethionine-dependent methy... 53 5e-07 ECs3836 [R] COG0220 Predicted S-adenosylmethionine-dependent met... 53 5e-07 NMB1328 [R] COG0220 Predicted S-adenosylmethionine-dependent met... 53 7e-07 yggH [R] COG0220 Predicted S-adenosylmethionine-dependent methyl... 53 7e-07 RSc0703 [R] COG0220 Predicted S-adenosylmethionine-dependent met... 52 9e-07 >ZyggH [R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase EcZ Escherichia coli O157:H7 EDL933 Length = 239 Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 22/181 (12%) Query: 71 EPPLILDTGCGVGLSTLHLAAQYPDHFVIGIDQSADRLA---RHTHWDGPEPDNLCFVRA 127 E P+ L+ G G+G S + +A P+ +GI+ + + H +G NL + Sbjct: 63 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEG--LSNLRVMCH 120 Query: 128 DLVDYW-RLAQQAGLRPAQHYLLYPNPWPKIGHLARRWHGHAVFPFI------LSLGGRL 180 D V+ ++ LR Q L +P+PW K H RR PF L LGG Sbjct: 121 DAVEVLHKMIPDNSLRMVQ--LFFPDPWHKARHNKRRI---VQVPFAELVKSKLQLGGVF 175 Query: 181 ECRSNWRIYVEEFTSALNQLTGRSIQAE-----PWLPATPITPFERKYLASGHALWRCVV 235 ++W Y E ++ + G +E P + P+T FE++ GH +W + Sbjct: 176 HMATDWEPYAEHMIEVMSSIDGYKNLSESNDYVPRPASRPVTKFEQRGHRLGHGVWDLMF 235 Query: 236 D 236 + Sbjct: 236 E 236 >ECs3836 [R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase Ecs Escherichia coli O157:H7 Length = 239 Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 22/181 (12%) Query: 71 EPPLILDTGCGVGLSTLHLAAQYPDHFVIGIDQSADRLA---RHTHWDGPEPDNLCFVRA 127 E P+ L+ G G+G S + +A P+ +GI+ + + H +G NL + Sbjct: 63 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEG--LSNLRVMCH 120 Query: 128 DLVDYW-RLAQQAGLRPAQHYLLYPNPWPKIGHLARRWHGHAVFPFI------LSLGGRL 180 D V+ ++ LR Q L +P+PW K H RR PF L LGG Sbjct: 121 DAVEVLHKMIPDNSLRMVQ--LFFPDPWHKARHNKRRI---VQVPFAELVKSKLQLGGVF 175 Query: 181 ECRSNWRIYVEEFTSALNQLTGRSIQAE-----PWLPATPITPFERKYLASGHALWRCVV 235 ++W Y E ++ + G +E P + P+T FE++ GH +W + Sbjct: 176 HMATDWEPYAEHMIEVMSSIDGYKNLSESNDYVPRPASRPVTKFEQRGHRLGHGVWDLMF 235 Query: 236 D 236 + Sbjct: 236 E 236 >NMB1328 [R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase Nme Neisseria meningitidis MC58 Length = 238 Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 69/172 (40%), Gaps = 14/172 (8%) Query: 73 PLILDTGCGVGLSTLHLAAQYPDHFVIGIDQSADRLARHTHW-DGPEPDNLCFVRADLVD 131 P IL+ G G+G +T +A + P+ + ID + D +N+ +R D V+ Sbjct: 66 PKILEIGFGMGTATAEIARRLPETDFLAIDVHGPGVGNLLKLIDENHLENIRVMRHDAVE 125 Query: 132 YWRLAQQAGLRPAQHYLLYPNPWPKIGHLARRWHGHAVFPFI------LSLGGRLECRSN 185 Q G H + +P+PW K H RR PFI L GG + ++ Sbjct: 126 VVENMLQDGSLDGIH-IFFPDPWHKKRHHKRRL---IQAPFIAKLLPKLKTGGYIHLATD 181 Query: 186 WRIYVEEFTSALNQLTGRSIQAEPWLPA---TPITPFERKYLASGHALWRCV 234 W Y ++ L+ A + P P T FE + GH +W V Sbjct: 182 WEEYAQQMLEVLSSFDSLQNTAADYAPTPDYRPETKFEARGKRLGHGVWDLV 233 >yggH [R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase Eco Escherichia coli K12 Length = 239 Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 22/181 (12%) Query: 71 EPPLILDTGCGVGLSTLHLAAQYPDHFVIGIDQSADRLA---RHTHWDGPEPDNLCFVRA 127 E P+ L+ G G+G S + +A P+ +GI+ + + H +G NL + Sbjct: 63 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEG--LSNLRVMCH 120 Query: 128 DLVDYW-RLAQQAGLRPAQHYLLYPNPWPKIGHLARRWHGHAVFPFI------LSLGGRL 180 D V+ ++ LR Q L +P+PW K H RR PF L LGG Sbjct: 121 DAVEVLHKMIPDNSLRMVQ--LFFPDPWHKARHNKRRI---VQVPFAELVKSKLQLGGVF 175 Query: 181 ECRSNWRIYVEEFTSALNQLTGRSIQAE-----PWLPATPITPFERKYLASGHALWRCVV 235 ++W Y E ++ + G +E P + P+T FE++ GH +W + Sbjct: 176 HMATDWEPYAEHMLEVMSSIDGYKNLSESNDYVPRPASRPVTKFEQRGHRLGHGVWDLMF 235 Query: 236 D 236 + Sbjct: 236 E 236 >RSc0703 [R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase Rso Ralstonia solanacearum Length = 251 Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 75/189 (39%), Gaps = 31/189 (16%) Query: 64 AAWGAAGEPPLILDTGCGVGLSTLHLAAQYPDHFVIGIDQSADRLARHTHWDGPEP-DNL 122 AA+G G I + G G+G ++ H+A PD +G++ + G N+ Sbjct: 70 AAFGRTGAR-RIFEIGFGMGETSAHIAQLRPDDDFLGVEVHEPGVGALLKLIGERGIGNV 128 Query: 123 CFVRADLVDYWRLAQQAGLRPAQHYLLYPNPWPKIGHLARRWHGHAVFPFILSL------ 176 V D V+ G H + +P+PW K H RR PF+ L Sbjct: 129 RIVSHDAVEVLAQMIPEGTLDGIH-VFFPDPWHKKRHNKRRL---IQGPFVARLAAHLRP 184 Query: 177 GGRLECRSNWRIYVEEFTSALNQLTGRSIQAEPWLPAT-----------PITPFERKYLA 225 GG L C ++W Y + L+ AEP L T P+T FE++ L Sbjct: 185 GGYLHCATDWEEYAHQMLEVLS--------AEPLLENTADGFAPRPDYRPVTKFEKRGLR 236 Query: 226 SGHALWRCV 234 GH +W V Sbjct: 237 LGHGVWDVV 245