BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0069.p (289 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA2308 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 385 e-107 RSp1507 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate trans... 308 8e-84 MK0603 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 207 3e-53 MA0063 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 205 9e-53 MJ0412 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 202 9e-52 >PA2308 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Pae Pseudomonas aeruginosa Length = 282 Score = 385 bits (988), Expect = e-107, Method: Compositional matrix adjust. Identities = 193/270 (71%), Positives = 220/270 (81%), Gaps = 3/270 (1%) Query: 20 LLQVQHVSLQYRSATAVVQATHDVSFDVHTADRFVLLGPSGCGKSSLLKSVAGFLPPAAG 79 LL V VSL+YR+ + VV+AT VSF+V ADRFVLLGPSGCGKS+LLK+VAGF+ P+ G Sbjct: 16 LLAVDGVSLEYRTRSRVVRATQRVSFEVDPADRFVLLGPSGCGKSTLLKAVAGFITPSEG 75 Query: 80 DIRLDGQMVRQPGPDRIVVFQEFDQLPPWKTVLHNVMFPLLASRTLGKREAAERARHYLD 139 +IRL GQ VR PGPDRIVVFQEFDQLPPWKTV NV+FPL S + + EA RA L+ Sbjct: 76 EIRLQGQAVRAPGPDRIVVFQEFDQLPPWKTVRQNVLFPLRVSGQVTRDEAERRADECLE 135 Query: 140 KVGLAHFANAYPHTLSGGMKARVAIARALAMQPKMLLMDEPFAALDALTRRKMQEELLAL 199 KVGLA FA AYPHTLSGGMKARVAIARALAMQPK+LLMDEPFAALDALTRRKMQEELL L Sbjct: 136 KVGLAGFAEAYPHTLSGGMKARVAIARALAMQPKILLMDEPFAALDALTRRKMQEELLRL 195 Query: 200 WEEVRFTLLFVTHSIEEALVVGNRILLLSPHPGRVRAEINSHQYDLGSLGGVGFQQTAQR 259 WEEVRFTLLFVTHSIEEALVVGNRILLLSPHPGRVRAE++ H + L SLGG Q A+R Sbjct: 196 WEEVRFTLLFVTHSIEEALVVGNRILLLSPHPGRVRAEVHGHPFGLHSLGGEPLQAAARR 255 Query: 260 IHRLLFEDGEGSAAPAPQPAINFSDVRFSY 289 IHRLLF++G P ++F+D+R ++ Sbjct: 256 IHRLLFDEG---GEPTAAATLDFADIRLAH 282 >RSp1507 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Rso Ralstonia solanacearum Length = 261 Score = 308 bits (789), Expect = 8e-84, Method: Compositional matrix adjust. Identities = 154/247 (62%), Positives = 188/247 (76%), Gaps = 2/247 (0%) Query: 19 PLLQVQHVSLQYRSATAVVQATHDVSFDVHTADRFVLLGPSGCGKSSLLKSVAGFLPPAA 78 PLL V+ V+LQY++ +V AT+ V F VH +R +LLGPSGCGKS+LLK++ G+L P Sbjct: 7 PLLDVRGVTLQYKTRQHLVTATYRVDFQVHPGERTILLGPSGCGKSTLLKAIGGYLAPTE 66 Query: 79 GDIRLDGQMVRQPGPDRIVVFQEFDQLPPWKTVLHNVMFPLLASRTLGKREAAERARHYL 138 G+IRL GQ V +PGPDR++VFQEFDQL PWKTV NV+FPLLA+ LG REA RA HY+ Sbjct: 67 GEIRLKGQPVTRPGPDRMMVFQEFDQLLPWKTVKENVLFPLLATGKLGAREAEARALHYI 126 Query: 139 DKVGLAHFANAYPHTLSGGMKARVAIARALAMQPKMLLMDEPFAALDALTRRKMQEELLA 198 KV LA FA+ +PH LSGGMK RVAIAR +AM+P +LLMDEPFAALDALTRRKMQ+ELL Sbjct: 127 HKVNLAKFADHHPHMLSGGMKQRVAIARGMAMEPDVLLMDEPFAALDALTRRKMQDELLQ 186 Query: 199 LWEEVRFTLLFVTHSIEEALVVGNRILLLSPHPGRVRAEINSHQYDLGSLGGVGFQQTAQ 258 LW+E RFT+LFVTHSI EA+ G+RIL+LSPHPG+VRAE+ S G F+ Sbjct: 187 LWDETRFTVLFVTHSIPEAIRCGSRILILSPHPGQVRAELPS--LARGDDDPERFKALEA 244 Query: 259 RIHRLLF 265 IH +LF Sbjct: 245 EIHDMLF 251 >MK0603 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Mka Methanopyrus kandleri AV19 Length = 246 Score = 207 bits (526), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 110/218 (50%), Positives = 150/218 (68%), Gaps = 11/218 (5%) Query: 20 LLQVQHVSLQYRSATAVVQATHDVSFDVHTADRFVLLGPSGCGKSSLLKSVAGFLPPAAG 79 +L+V+ + Y ++ ++F+V + F ++GPSGCGK++LLK +AG AG Sbjct: 4 ILKVEDLHKSYDD----LKVLDGITFEVSEGEFFAIVGPSGCGKTTLLKIIAGLEDYDAG 59 Query: 80 DIRLDGQMVRQPGPDRIVVFQEFDQLPPWKTVLHNVMF-PLLASRTLGKREAAER-ARHY 137 + +DG+ VR+PGPDR +VFQE+ + PWKTVL NVMF PL+ + E AER AR Sbjct: 60 RVLVDGEEVREPGPDRALVFQEY-AIFPWKTVLENVMFAPLMQGK---DPEEAERIAREC 115 Query: 138 LDKV-GLAHFANAYPHTLSGGMKARVAIARALAMQPKMLLMDEPFAALDALTRRKMQEEL 196 L V GL F +AYP LSGGMK RVAIARALA +P++LLMDEPFAA+DA TR KMQEEL Sbjct: 116 LKVVPGLEGFEDAYPKQLSGGMKQRVAIARALAAEPRILLMDEPFAAVDAQTRNKMQEEL 175 Query: 197 LALWEEVRFTLLFVTHSIEEALVVGNRILLLSPHPGRV 234 L +WE T+L VTH++EEA+ + +R+++LSP P + Sbjct: 176 LKIWERTGQTILLVTHNVEEAVFLADRVMVLSPRPAEI 213 >MA0063 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Mac Methanosarcina acetivorans str.C2A Length = 268 Score = 205 bits (522), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 98/199 (49%), Positives = 139/199 (69%), Gaps = 2/199 (1%) Query: 37 VQATHDVSFDVHTADRFVLLGPSGCGKSSLLKSVAGFLPPAAGDIRLDGQMVRQPGPDRI 96 +A H++SFDV + LLGPSGCGK++LL+ AG +G+I L+G + P P R Sbjct: 36 TEALHNISFDVQDGEFICLLGPSGCGKTTLLRIAAGLETLTSGEITLNGVPITGPDPKRG 95 Query: 97 VVFQEFDQLPPWKTVLHNVMFPLLASRTLGKREAAERARHYLDKVGLAHFANAYPHTLSG 156 +VFQ++ L PW+TV+ N+ F L + + K EA ++ YL+ VGL F N+YPH LSG Sbjct: 96 MVFQQYS-LFPWRTVIDNITFGL-EMQGIKKSEARKQVEKYLELVGLGQFKNSYPHELSG 153 Query: 157 GMKARVAIARALAMQPKMLLMDEPFAALDALTRRKMQEELLALWEEVRFTLLFVTHSIEE 216 GM+ R AIARALA +P++LLMDEPF ALDA TR +Q+ELL +WE+ T LFVTHS++E Sbjct: 154 GMQQRAAIARALANEPEVLLMDEPFGALDAQTRNVLQDELLKIWEQKHVTFLFVTHSVDE 213 Query: 217 ALVVGNRILLLSPHPGRVR 235 A+ + +RI++++ PGRV+ Sbjct: 214 AVFLSDRIVVMTSRPGRVK 232 >MJ0412 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Mja Methanococcus jannaschii Length = 267 Score = 202 bits (513), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 98/226 (43%), Positives = 151/226 (66%), Gaps = 2/226 (0%) Query: 10 SVSAAAAFKPLLQVQHVSLQYRSATAVVQATHDVSFDVHTADRFVLLGPSGCGKSSLLKS 69 V K L+V++++ + V+A +++ +V+ + ++GPSGCGK++LL+ Sbjct: 6 EVKKRDRMKVKLKVENLTKIFEFNGNRVKALDNINLEVYENEFLTVMGPSGCGKTTLLRI 65 Query: 70 VAGFLPPAAGDIRLDGQMVRQPGPDRIVVFQEFDQLPPWKTVLHNVMFPLLASRTLGKRE 129 +AG P G + LDG+ V+ PG DR VVFQ++ L PW+TVL NV F L + + K E Sbjct: 66 IAGLDYPTEGKVLLDGKEVKGPGADRGVVFQQY-TLMPWRTVLKNVTFGL-ELKGIPKNE 123 Query: 130 AAERARHYLDKVGLAHFANAYPHTLSGGMKARVAIARALAMQPKMLLMDEPFAALDALTR 189 E A+ ++ VGL F +AYP+ LSGGM+ RVAIAR LA P+++LMDEPFAALDA TR Sbjct: 124 RIEIAKKFIKMVGLEGFEDAYPYQLSGGMQQRVAIARTLANDPEIVLMDEPFAALDAQTR 183 Query: 190 RKMQEELLALWEEVRFTLLFVTHSIEEALVVGNRILLLSPHPGRVR 235 +Q ELL +W++ + T+ FVTHS++EA+ + +R+++L+ PGR++ Sbjct: 184 NILQNELLKIWQKEKKTVFFVTHSVDEAVYLSDRVVVLTARPGRIK 229