BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0068.p (288 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA2307 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transp... 387 e-107 RSp1508 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 328 7e-90 CAC0108 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 112 1e-24 YPO3626 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 108 2e-23 YPO2287 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 104 2e-22 >PA2307 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Pae Pseudomonas aeruginosa Length = 288 Score = 387 bits (995), Expect = e-107, Method: Compositional matrix adjust. Identities = 220/288 (76%), Positives = 251/288 (87%) Query: 1 MPQTPPIRDEYEIPLTPLPGLVLQRQFSLPQRIWQQGWVRKGAILLLLALVWEGVARWQN 60 M + +R+EYE+ L PL + L+R+ L QR+WQQ W+RKG IL LLAL WE AR Q Sbjct: 1 MSRVTRVREEYEVQLEPLLEVSLERRLPLSQRLWQQSWLRKGLILALLALAWELAARVQG 60 Query: 61 NDLLLPTFLQTAQAFVDGIRSGELFGKTWLSLQVLMKAYVLGIVAAFVLTTLAVSSQFGR 120 NDLLLP FLQTA+A +G+ SGEL K +SL VL K Y+LGIV AFVLT+LAVS+Q GR Sbjct: 61 NDLLLPGFLQTARALGEGLASGELPAKAGISLLVLFKGYLLGIVLAFVLTSLAVSTQLGR 120 Query: 121 DLLGTLTSMFNPLPAIALLPIALLWFGLGQGSLIFVLVHSVLWALAVNTYAGFLGVSDTL 180 DLLGTLT+MFNPLPAIALLP+ALLWFGLGQ SLIFVLVHSVLWALA+NTYAGFLGVS+TL Sbjct: 121 DLLGTLTAMFNPLPAIALLPLALLWFGLGQNSLIFVLVHSVLWALALNTYAGFLGVSETL 180 Query: 181 RMAGRNYGLHGLRFVLQVLVPAALPSILAGLRIGWAFAWRTLIAAELVFGATSGQGGLGW 240 RMAGRNYGL GLRFVL +LVPAALPSILAGL+IGWAFAWRTLIAAELVFGA+SG+GGLGW Sbjct: 181 RMAGRNYGLRGLRFVLLILVPAALPSILAGLKIGWAFAWRTLIAAELVFGASSGKGGLGW 240 Query: 241 YIFQNRNELYTDKVFAGLAMVILIGLLVENLVFNTLERVTVKKWGMQR 288 YIFQNRNELYTDKVFAGLA+V+LIGLLVENLVF ++ER+TVK+WG+QR Sbjct: 241 YIFQNRNELYTDKVFAGLAVVVLIGLLVENLVFGSIERLTVKRWGVQR 288 >RSp1508 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Rso Ralstonia solanacearum Length = 298 Score = 328 bits (842), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 168/266 (63%), Positives = 210/266 (78%) Query: 22 VLQRQFSLPQRIWQQGWVRKGAILLLLALVWEGVARWQNNDLLLPTFLQTAQAFVDGIRS 81 V+++ S+ +R++ Q W+RK AIL+ LAL WEG ARW +N LLLPTF TA+A G+ Sbjct: 32 VIEKPLSMAERLYAQAWLRKLAILVALALAWEGGARWLDNPLLLPTFSDTARALWAGLAD 91 Query: 82 GELFGKTWLSLQVLMKAYVLGIVAAFVLTTLAVSSQFGRDLLGTLTSMFNPLPAIALLPI 141 G LF + S+Q L+ Y LG+ + L L + S+ G+D L TLT+MFNPLPAIALLPI Sbjct: 92 GTLFARIGTSMQTLLAGYALGLALSCALVVLGIGSRLGQDFLETLTAMFNPLPAIALLPI 151 Query: 142 ALLWFGLGQGSLIFVLVHSVLWALAVNTYAGFLGVSDTLRMAGRNYGLHGLRFVLQVLVP 201 AL+WFGLG GSLIFV+VHSV+WA+++NT+AGFL VS+TLRM GRNYGL G+ ++ Q+L+P Sbjct: 152 ALVWFGLGNGSLIFVIVHSVVWAVSLNTHAGFLSVSNTLRMVGRNYGLSGMAYLTQILIP 211 Query: 202 AALPSILAGLRIGWAFAWRTLIAAELVFGATSGQGGLGWYIFQNRNELYTDKVFAGLAMV 261 AA PSIL GL+IGWAFAWRTLIA+ELVFG +SGQGGLGWYI++N+N L +VFAGL V Sbjct: 212 AAFPSILTGLKIGWAFAWRTLIASELVFGVSSGQGGLGWYIYENKNLLQIPEVFAGLLTV 271 Query: 262 ILIGLLVENLVFNTLERVTVKKWGMQ 287 ILIGLLVENLVF TLE TVK+WGMQ Sbjct: 272 ILIGLLVENLVFRTLEARTVKRWGMQ 297 >CAC0108 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Cac Clostridium acetobutylicum Length = 265 Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 72/260 (27%), Positives = 131/260 (50%), Gaps = 14/260 (5%) Query: 37 GWVRKGAILLLLALVWEGVAR--------WQNNDLLLPTFLQTAQAFVDGIRSGELFGKT 88 G R+ ++L +WE + + W+ P + A A++ ++ LF T Sbjct: 10 GIFRRVLFYIILIAIWELIYKVFVDILGVWKAYTFPSPGEVYNALAYL--VKDNTLFIAT 67 Query: 89 WLSLQVLMKAYVLGIVAAFVLTTLAVSSQFGRDLLGTLTSMFNPLPAIALLPIALLWFGL 148 SL L+ Y++ + L + + ++ + L L LP++ +P A+LW+G+ Sbjct: 68 GASLTRLVIGYIIALFIGIALALVCIKYKYVDENLTPLMLGLQTLPSVCWIPFAILWYGI 127 Query: 149 GQGSLIFVLVHSVLWALAVNTYAGFLGVSDTLRMAGRNYGLHGLRFVLQVLVPAALPSIL 208 + S+IFV V L+++A++T +G V+ A R G G V++P+ALP I+ Sbjct: 128 DERSIIFVTVVGSLFSIAISTISGVKNVNPIYVKAARTMGARGKNLYFDVVIPSALPEII 187 Query: 209 AGLRIGWAFAWRTLIAAELVFGATSGQGGLGWYIFQNRNELYTDKVFAGLAMVILIGLLV 268 +G+R GW+FAWR L+A E++ S GLG + R +V A + ++I GL+ Sbjct: 188 SGMRQGWSFAWRALMAGEML----SATKGLGQVLTAGRELGDISQVMAVMIIIIAFGLIF 243 Query: 269 ENLVFNTLERVTVKKWGMQR 288 + L+F +E+ K G+++ Sbjct: 244 DKLLFEKVEKNIRYKCGLEK 263 >YPO3626 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Ype Yersinia pestis Length = 265 Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 74/224 (33%), Positives = 113/224 (50%), Gaps = 6/224 (2%) Query: 56 ARWQNNDLLLPTFLQTAQAFVDGIRSGELFGKTWLSLQVLMKAYVLGIVAAFVLTTLAVS 115 A W +N +L P AF +SGEL+ +S + + +G VL + Sbjct: 32 AGWLSNRIL-PAPSAVVTAFWALTKSGELWQHLTISSWRALIGFSIGGSIGLVLGVITGL 90 Query: 116 SQFGRDLLGTLTSMFNPLPAIALLPIALLWFGLGQGSLIFVLVHSVLWALAVNTYAGFLG 175 S++G LL + M +P +AL+P+ +LWFG+ + + IF++ L+ + +NTY G Sbjct: 91 SRWGERLLNSSVQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIYLNTYHGIKN 150 Query: 176 VSDTLRMAGRNYGLHGLRFVLQVLVPAALPSILAGLRIGWAFAWRTLIAAELVFGATSGQ 235 + L R+YGL G R + QV++P ALPSI+ G+R F W TLI AE + S Sbjct: 151 IDSGLLEMARSYGLSGFRLLTQVVLPGALPSIMVGVRFALGFMWLTLIVAETI----SAN 206 Query: 236 GGLGWYIFQNRNELYTDKVFAGLAMVILIGLLVENLVFNTLERV 279 G+G+ R L TD V + + L+G L + LERV Sbjct: 207 SGIGYLAMNAREFLQTDVVVVAIVLYALLGKLADGSA-QLLERV 249 >YPO2287 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Ype Yersinia pestis Length = 273 Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 64/198 (32%), Positives = 107/198 (54%), Gaps = 5/198 (2%) Query: 81 SGELFGKTWLSLQVLMKAYVLGIVAAFVLTTLAVSSQFGRDLLGTLTSMFNPLPAIALLP 140 SGEL W S+ ++ +++G + A L SS+ G DL+ L P+P IA +P Sbjct: 70 SGELLHDAWASIYRVIIGFLIGALLALPLGLWVGSSKIGNDLMNPLIQFLRPIPPIAYIP 129 Query: 141 IALLWFGLGQGSLIFVLVHSVLWALAVNTYAGFLGVSDTLRMAGRNYGLHGLRFVLQVLV 200 +A+LWFGLG F++ + + +NT AG V +A RN G ++++ Sbjct: 130 LAMLWFGLGNPPAFFLISIGAFFPILINTIAGVRNVDGIYILAARNLGAGQATMFRRIIL 189 Query: 201 PAALPSILAGLRIGWAFAWRTLIAAELVFGATSGQGGLGWYIFQNRNELYTDKVFAGLAM 260 PAA P IL G+R+G A+ +I AE++ + G+G+ I + R +++DKV AG+ Sbjct: 190 PAATPYILTGMRVGIGTAFICVIVAEMI----AVNSGVGYRILEAREYMWSDKVIAGMFT 245 Query: 261 VILIGLLVENLVFNTLER 278 + +GL+++ L + L R Sbjct: 246 IGFLGLVID-LCMDRLNR 262