BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0066.p         (72 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMc01933 Non COG                                                       69   2e-12
ZyiiF Non COG                                                          53   1e-07
ECs4816 Non COG                                                        53   1e-07
yiiF Non COG                                                           53   1e-07
RC0297 Non COG                                                         47   1e-05

>SMc01933 Non COG
          Length = 71

 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 47/70 (67%)

Query: 3  RILVDIPDSQLADLTQIVESQQRPRAVIIREAIAAYITQHKLEHNAEVFGIWKKKKVDGL 62
          R L+D+ D+Q+  L  + +  +R RA +IREAI  Y+ +H  E   + FG+W K+KVDGL
Sbjct: 2  RALIDMNDTQVEALDTLAKRVRRSRAALIREAIDDYLNRHHREQIEDGFGLWGKRKVDGL 61

Query: 63 DYQKELRAEW 72
           YQ+++R EW
Sbjct: 62 AYQEKVRGEW 71


>ZyiiF Non COG
          Length = 80

 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 40/72 (55%)

Query: 1  MSRILVDIPDSQLADLTQIVESQQRPRAVIIREAIAAYITQHKLEHNAEVFGIWKKKKVD 60
          M RI++D+ +  +  L  +   +  PR  ++REA+  Y+           FGIW+  + D
Sbjct: 9  MGRIILDLSNEVIKQLDDLEVQRNLPRTELLREAVDQYLVNQSQTVRTSAFGIWQGCEED 68

Query: 61 GLDYQKELRAEW 72
          G++YQ++LR EW
Sbjct: 69 GVEYQRKLREEW 80


>ECs4816 Non COG
          Length = 80

 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 40/72 (55%)

Query: 1  MSRILVDIPDSQLADLTQIVESQQRPRAVIIREAIAAYITQHKLEHNAEVFGIWKKKKVD 60
          M RI++D+ +  +  L  +   +  PR  ++REA+  Y+           FGIW+  + D
Sbjct: 9  MGRIILDLSNEVIKQLDDLEVQRNLPRTELLREAVDQYLVNQSQTVRTSAFGIWQGCEED 68

Query: 61 GLDYQKELRAEW 72
          G++YQ++LR EW
Sbjct: 69 GVEYQRKLREEW 80


>yiiF Non COG
          Length = 80

 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 41/72 (56%)

Query: 1  MSRILVDIPDSQLADLTQIVESQQRPRAVIIREAIAAYITQHKLEHNAEVFGIWKKKKVD 60
          M RIL+D+ +  +  L  +   +  PRA ++REA+  Y+          V GIW+  + D
Sbjct: 9  MGRILLDLSNEVIKQLDDLEVQRNLPRADLLREAVDQYLINQSQTARTSVPGIWQGCEED 68

Query: 61 GLDYQKELRAEW 72
          G++YQ++LR EW
Sbjct: 69 GVEYQRKLREEW 80


>RC0297 Non COG
          Length = 74

 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 3/72 (4%)

Query: 3  RILVDIPDSQLADLTQIVESQQRPRAVIIREAIAAYITQHKLEHNA--EVFGIWKKKKVD 60
          R +++I DSQ+  L +I + ++  R  II +A+ +YI  +   + A    FG+WK K +D
Sbjct: 2  RTIINIADSQIKILDKISK-KKISRDKIIGQALTSYIASNDHNNKAFENAFGLWKDKNLD 60

Query: 61 GLDYQKELRAEW 72
           ++YQ +L  EW
Sbjct: 61 SVEYQTKLCNEW 72