BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.4666.p (513 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152980965|ref|YP_001355204.1| glucan biosynthesis protein G [... 482 e-137 gi|152979793|ref|YP_001353521.1| glucan biosynthesis protein D [... 367 e-103 >gi|152980965|ref|YP_001355204.1| glucan biosynthesis protein G [Janthinobacterium sp. Marseille] Length = 510 Score = 482 bits (1240), Expect = e-137, Method: Compositional matrix adjust. Identities = 232/487 (47%), Positives = 319/487 (65%), Gaps = 8/487 (1%) Query: 18 GFDLNQAVARAQTLAAKPYQKPVSNLSPTFAAMQFADYMKIQPKSDKFEWRNQPTPFKLA 77 F+ N +AQ L+ Y+ P N+S ++ + Y I+ K ++ W + PF+L Sbjct: 30 AFEFNDVAKKAQQLSTTSYKAPQRNISKALESLNYDQYRDIRFKPERAYWHAEKLPFELT 89 Query: 78 FYHQGMQFNAPVVIHEIVDGRVQDVGYSTDRFDFGDLKLARESTAHLGYAGFRVVYPINR 137 F+HQG QF +PV I+EIV R + + + F++G KL+ HLGY+GFRV Y IN Sbjct: 90 FFHQGRQFESPVRINEIVGQRARQIPFDPRAFNYGANKLSPHDLKHLGYSGFRVHYAINT 149 Query: 138 DDKEDEIMSVLGASYFRVIGKGQVYGLSARGLAIDTAMLSGEEFPHFTEFWIQRPAPGEQ 197 +DEIM LGASY R +GKGQ+YGLSARGLA+DTA+ SGEEFP F EFWI+RP+ + Sbjct: 150 PKYKDEIMVFLGASYLRAVGKGQIYGLSARGLAVDTALNSGEEFPKFVEFWIERPSANSK 209 Query: 198 QLTFYALLDSPRATGAYKFTLTPGKDALLDVQARVFLRGEVARLGIAPLTSMFLFGPNQQ 257 QLT YALLDS R TGAY+F + PG+ + +V+++++LR V +LGIAPLTSM+ FG NQ+ Sbjct: 210 QLTIYALLDSRRVTGAYRFVVKPGEQTVTEVKSQLYLRENVTKLGIAPLTSMYFFGENQR 269 Query: 258 SSRRNFRPAIHDSNGLAIHTGSGEWLWRPLNDPQNVEVSSFEVTNPRGFGLLQRGRDFSD 317 S+ ++RP +HDS+GL+I +G+GEW+WRPL +P+ + V+S+ ++NP GFGL+QR S Sbjct: 270 STTEDYRPEVHDSDGLSIQSGTGEWIWRPLVNPKRLLVTSYGLSNPSGFGLMQRDERQSS 329 Query: 318 YEDLKDRYDLRPSAWIEPRGDWGKGAVQLVEIPTADETNDNIVAYWLPAQLPARGTPVAY 377 YEDL+ RY+ RPSAW+EP G WG G V+LV+IPT DE NDNIVAYW+P +P GTP+ Sbjct: 330 YEDLESRYETRPSAWVEPIGKWGSGRVELVQIPTPDEFNDNIVAYWVPDVIPKPGTPIKL 389 Query: 378 DYRIHWTMDEPAILNNEVGWVKQTFHTDGELTQANLIRAFDGTTALLVDFTGGPLGNLPA 437 DYR++W ++ A + WV QT G L R D +TAL VDF G LP Sbjct: 390 DYRLYW--NKSAQQRPPLSWVTQTRRGHGHL------RKPDDSTALFVDFEGPIFKKLPQ 441 Query: 438 GTAVQPQVNVSNNGELIDAQLQPNPAINGWRLTLRVKIRNVAQAVELRAALTANGKPLTE 497 ++ + + +NGE+++A N A GWR LRVK + + +ELR L N L+E Sbjct: 442 DAKIEFRASADSNGEILEAHTYRNEATGGWRAALRVKRVDDKKPIELRGFLHTNNTTLSE 501 Query: 498 TWSYQLP 504 TWSY LP Sbjct: 502 TWSYILP 508 >gi|152979793|ref|YP_001353521.1| glucan biosynthesis protein D [Janthinobacterium sp. Marseille] Length = 527 Score = 367 bits (943), Expect = e-103, Method: Compositional matrix adjust. Identities = 203/499 (40%), Positives = 282/499 (56%), Gaps = 13/499 (2%) Query: 17 QGFDLNQAVARAQTLAAKPYQKPVSNLSPTFAAMQFADYMKIQPKSDKFEWRNQPTPFKL 76 + FD +A+TLA+KPY P + A+ + Y I + D W F++ Sbjct: 40 EAFDYAWLKGQARTLASKPYHAPDYPVPAAVKALDWDQYQAIGYRDDHALWAKDKLRFQV 99 Query: 77 AFYHQGMQFNAPVVIHEIVDGRVQDVGYSTDRFDFGDLKL-ARESTAHLGYAGFRVVYPI 135 F+H GM N V IHE+ DG+ ++ Y F++G L E LG+AGFRV + Sbjct: 100 KFFHLGMYANQSVKIHEVKDGKAVELAYDPAMFNYGKSGLKGAEMPKDLGFAGFRVNF-- 157 Query: 136 NRDDKEDEIMSVLGASYFRVIGKGQVYGLSARGLAIDTAMLSGEEFPHFTEFWIQRPAPG 195 D +I + LGASYFR +G YGLSARGLAID M EEFP F+EFW++RPA Sbjct: 158 -HTDLVRDITAFLGASYFRAVGGEWQYGLSARGLAIDCGMERPEEFPRFSEFWLERPAKQ 216 Query: 196 EQQLTFYALLDSPRATGAYKFTLTPGKDALLDVQARVFLRGEVARLGIAPLTSMFLFGPN 255 L YALLDSP +GAY+F + PG L+DV ++ R + R+GIAPLTSMF G N Sbjct: 217 SSHLVVYALLDSPSISGAYRFEIAPGATTLMDVDVALYPRKTIERMGIAPLTSMFQMGEN 276 Query: 256 QQSSRRNFRPAIHDSNGLAIHTGSGEWLWRPLNDPQNVEVSSFEVTNPRGFGLLQRGRDF 315 + ++RP IHDS+GL + TG+GEW+WRPL +P+++ +++ NPRGFGL+QR R+F Sbjct: 277 DRRISNDWRPEIHDSDGLEMWTGNGEWIWRPLLNPEHLRFNAYADENPRGFGLMQRDRNF 336 Query: 316 SDYEDLKDRYDLRPSAWIEPRGDWGKGAVQLVEIPTADETNDNIVAYWLPAQLPARGTPV 375 Y+D YD RPS W+EP+ WGKG+VQLVEIPT DET DNIVA+W P P G + Sbjct: 337 DHYQDDGVFYDRRPSLWVEPKAGWGKGSVQLVEIPTVDETFDNIVAFWNPEAKPQPGQEL 396 Query: 376 AYDYRIHWTMDEPAILNNEVGWVKQTFHTDGELTQANLIRAFDGTTALLVDFTGGPLGNL 435 Y Y++HW P +T G + + ++ VDF GG L Sbjct: 397 LYGYKLHWGAKMPYAPKAATVVATRT-GVGGVIGKKRTYFSW----RFAVDFAGGDFALL 451 Query: 436 PAGTAVQPQVNVSNNGELIDAQLQPNPAINGWRLTLRVKIRN-VAQAVELRAALTANGKP 494 V P ++ + +G + +P I G+R +K+ + V ++LR L A+G+P Sbjct: 452 GKDVKVVPVIS-ATHGTVEITSARPLHDIKGYRAIFDLKVGDEVKGPIDLRLYLAADGQP 510 Query: 495 LTETWSYQLPPRSDVQRTF 513 L+ETW YQ P +D R+F Sbjct: 511 LSETWLYQWTPPTD--RSF 527 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.319 0.136 0.414 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 1,309,622 Number of extensions: 59115 Number of successful extensions: 141 Number of sequences better than 1.0e-08: 2 Number of HSP's gapped: 139 Number of HSP's successfully gapped: 2 Length of query: 513 Length of database: 1,221,021 Length adjustment: 87 Effective length of query: 426 Effective length of database: 899,382 Effective search space: 383136732 Effective search space used: 383136732 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 132 (55.5 bits)