BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4657.p
         (230 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981060|ref|YP_001354941.1| lipoyltransferase [Janthinobact...   325   1e-90

>gi|152981060|ref|YP_001354941.1| lipoyltransferase
           [Janthinobacterium sp. Marseille]
          Length = 216

 Score =  325 bits (834), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 153/206 (74%), Positives = 182/206 (88%), Gaps = 1/206 (0%)

Query: 17  RPQIVRRGVEPYEASFAAMRAYTDARSADTPDQLWIVEHPPVYTLGLGADRAHVLNPHDI 76
           +P I++RG+E YE +FAAMRA+TDAR+A T D+LWIVEHPPV+TLGL AD +HVL+PH I
Sbjct: 6   QPLILQRGLEAYETTFAAMRAFTDARTAATADELWIVEHPPVFTLGLAADPSHVLDPHQI 65

Query: 77  PIVQTDRGGEVTYHGPGQVVIYLLMDLRRNRSGARLFAREFVHNIEEAVIATLAAYNLAG 136
           P+V+TDRGGEVTYHGPGQVVIYLL+DLRR+++ ARLFARE V+ IE++VI TLAAYNLA 
Sbjct: 66  PVVETDRGGEVTYHGPGQVVIYLLLDLRRHKADARLFARELVNKIEQSVIDTLAAYNLAC 125

Query: 137 VRKEGAPGIYAADGPWQGAKVAALGLKIRGNGCTYHGVSLNVAMDLAPFSWINPCGYEGL 196
            RK GAPGIY +DGP QGAK+AALGLKIRGNGCTYHGVSLNVAMDL PF+WINPCGYE L
Sbjct: 126 ERKPGAPGIYMSDGPAQGAKIAALGLKIRGNGCTYHGVSLNVAMDLTPFTWINPCGYEDL 185

Query: 197 ATVDMQTLGATNARLADVQDLLADQL 222
           AT+DMQ+LGA    LA+VQ+ LA++L
Sbjct: 186 ATIDMQSLGAQTT-LAEVQNALANRL 210


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.320    0.136    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 510,209
Number of extensions: 21752
Number of successful extensions: 47
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 47
Number of HSP's successfully gapped: 1
Length of query: 230
Length of database: 1,221,021
Length adjustment: 80
Effective length of query: 150
Effective length of database: 925,261
Effective search space: 138789150
Effective search space used: 138789150
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 128 (53.9 bits)