BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.4642.p (411 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152981572|ref|YP_001351941.1| acyl-CoA dehydrogenase family p... 341 6e-95 gi|152981725|ref|YP_001351956.1| hypothetical protein mma_0266 [... 194 1e-50 gi|152981648|ref|YP_001354310.1| FMNH2-dependent monooxygenase [... 160 1e-40 >gi|152981572|ref|YP_001351941.1| acyl-CoA dehydrogenase family protein [Janthinobacterium sp. Marseille] Length = 437 Score = 341 bits (874), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 179/395 (45%), Positives = 248/395 (62%), Gaps = 7/395 (1%) Query: 20 ITSQAQALQVAAELAAEFAQSAAQRDRERILPFQQIERFSHSGLWAITVPRSHGGIGASW 79 I S +AL A LA EFAQ A+ RDRER LPF ++++ + SGLW ITVP+ HGG G S+ Sbjct: 18 IRSDEEALATAQVLADEFAQEASVRDRERRLPFAELKKITQSGLWGITVPKEHGGAGVSY 77 Query: 80 QTVAEVFRLISAADPSIGQIPQNHFGNLNLIANFASQAQQRFFFGEVLDGARLGNAGPER 139 T+A++F + S AD SIGQIPQNH+ + LI ++ Q++FFF +L G GNA E Sbjct: 78 VTLAQIFAIFSRADGSIGQIPQNHYFVIELIREHGTEEQKKFFFERILAGDHFGNALVEL 137 Query: 140 NGKNVLDVRTRATLDTEAGDGSYRLNGTRFYSTGALYAHWIPT--RAIDDDGQPLVVYNR 197 N K D + D GD YR ++Y+TG+LYA WIPT + D + L ++R Sbjct: 138 NAKKPEDRKVSLFAD---GDEHYRATVRKYYATGSLYADWIPTALNSEDKEEHHLAFFSR 194 Query: 198 HDAAGLRVIDDWSSFGQRTTASGTVVFDNVRVPAEQVLPLKDTLQRPNNIGPVSQLLQAA 257 H A GL +IDDW+ GQRTTASG+V+ DN R+ V+ ++ + + +GP Q++ AA Sbjct: 195 H-AEGLTIIDDWAGLGQRTTASGSVILDNARIAKNLVVSHREKKEHVSPVGPTGQIMHAA 253 Query: 258 IDAGIAQAAVQDTIAFVTTRSRPYADSGLERA-ADDPYILRDIGNLSLRLHAAEALLEDA 316 ID GIA+AA + TIAF+ R+ D+ + + +D +R+IG+LS+ LH AEALLE A Sbjct: 254 IDTGIARAAFEATIAFIRGRNPKKPDAAPDASWEEDQLTIREIGDLSVALHGAEALLERA 313 Query: 317 AALLDALPAQISFEQMAQASVAVAEAKVLSTEVALQASEKLFELSGSAATLATHNLDRHW 376 ++D +AS+AV+E + ST AL + KLFE SG+ AT + HNLDR+W Sbjct: 314 GRIIDHAYVTGLQTDWTKASIAVSEVRAASTHAALLITNKLFEFSGTQATASKHNLDRYW 373 Query: 377 RNARVHTLHDPVRWKYFAVGNYALNGTPPPRHNWS 411 R+AR HTLHDPVRW+ + VGNY LN P R ++ Sbjct: 374 RDARTHTLHDPVRWRLYDVGNYYLNDKVPLRRRFN 408 >gi|152981725|ref|YP_001351956.1| hypothetical protein mma_0266 [Janthinobacterium sp. Marseille] Length = 425 Score = 194 bits (492), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 130/392 (33%), Positives = 208/392 (53%), Gaps = 29/392 (7%) Query: 32 ELAAEF-------AQSAAQRDRERILPFQQIERFSHSGLWAITVPRSHGGIGASWQTVAE 84 ELAA F A+ A +R++ER LP++ + +G + +P +GG GA T+++ Sbjct: 23 ELAARFRPIFARIAEDAVRREQERELPYEAVRWLREAGFGRVRIPLKYGGFGA---TISQ 79 Query: 85 VFRLI---SAADPSIGQIPQNHFGNLNLIANFASQAQQRFFFGEVLDGARLGNAGPERNG 141 FRL+ + AD ++ + + HF L N ++ + F+F ++++G+ +G A E Sbjct: 80 FFRLLVELAEADSNVSHLLRGHFAFLESRINHTDESVREFWFPKIVEGSLIGYAMAELTA 139 Query: 142 KNVLDVRTRATLDTEAGDGSYRLNGTRFYSTGALYAHWIPTRAIDDDGQPLVVYNRHDAA 201 T AT+ + DG + LNG ++YSTG +YA WI +D + + + V A Sbjct: 140 VT----GTSATITQQ--DGKWFLNGKKYYSTGTIYADWIVASVVDGE-ERVSVSLPATAP 192 Query: 202 GLRVIDDWSSFGQRTTASGTVVFDNVRVPAEQV---LPLKDTLQRPNNIGPVSQLLQAAI 258 G+ IDDW FGQR T SGT VF+ V + E + L KD+ + + +L A+I Sbjct: 193 GVTRIDDWDGFGQRMTGSGTTVFEQVEILPEHINRRLTGKDSYAQSYQKAFLQLILLASI 252 Query: 259 DAGIAQAAVQDTIAFVTTRSRPYADSGLERAADDPYILRDIGNLSLRLHAAEALLEDAAA 318 AG+ +A +D IAFV ++R + G DP + R +G L+ AA+ ++E A Sbjct: 253 -AGVGRAVKRDGIAFVQRKTRAFGVLGESSPRHDPLVQRVVGRLASLSFAADTIVEGIAR 311 Query: 319 LLD----ALPAQISFEQM-AQASVAVAEAKVLSTEVALQASEKLFELSGSAATLATHNLD 373 LD A A + E + + +A+ + ++ LQAS LFE+ G++AT + LD Sbjct: 312 TLDEVHQARLADTADEALYVDTEIKAFQAQQIVIDLVLQASTLLFEVGGASATSESRRLD 371 Query: 374 RHWRNARVHTLHDPVRWKYFAVGNYALNGTPP 405 RHWRNAR H+P ++ A+G+Y LNGT P Sbjct: 372 RHWRNARTAASHNPAIFRERAIGDYYLNGTVP 403 >gi|152981648|ref|YP_001354310.1| FMNH2-dependent monooxygenase [Janthinobacterium sp. Marseille] Length = 417 Score = 160 bits (405), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 129/379 (34%), Positives = 189/379 (49%), Gaps = 28/379 (7%) Query: 43 QRDRERILPFQQIERFSHSGLWAITVPRSHGGIGASWQTVAEVFRLISAADPSIGQIPQN 102 +RDR + + + SGL + VP + GG W T+ ++ R + D S+ + Sbjct: 45 ERDRSGGTAWTERQVLRDSGLLKLAVPAAFGGPETPWPTIYKIIRRFAEVDSSLAHLFGF 104 Query: 103 HFGNLNLIANFASQAQQRFFFGE-VLDGARLGNAGPERNGKNVLDVRTRATL---DTEAG 158 + +A F + Q+ F+ G+ V + GNA N LD TRATL D + G Sbjct: 105 QHLQVASVALFGNPEQKAFYLGKTVSENWFWGNA------TNGLD--TRATLVWRDGKDG 156 Query: 159 -DGSYRLNGTRFYSTGALYAHWIPTRA--IDDDGQPLVVYNRHDAAGLRVIDDWSSFGQR 215 DG Y LNG + + +GA + + A D + + D +G++V+DDW + GQR Sbjct: 157 TDGHYELNGIKSFCSGATGSDMLNITAPRSADPADRVFLSIPTDRSGVKVLDDWDNLGQR 216 Query: 216 TTASGTVVFDNVRVPAEQVL--PLKDTLQRPNNIGPVSQLLQAAIDAGIAQAAVQDTIAF 273 T SG+V FD VRV A +VL P R VSQL+ I G AQ A+ + + Sbjct: 217 QTDSGSVTFDKVRVEAHEVLGPPGTSGTPRATLRTLVSQLILIEIYIGNAQGALLNAWQY 276 Query: 274 VTTRSRPYADSGLERAADDPYILRDIGNLSLRLHAAEAL-------LEDAAALLDALPAQ 326 + RP+ SG+ RA DDP+ + G+L + L AA AL L+ A DAL A Sbjct: 277 THEQGRPWFTSGVARAIDDPFTQQHYGDLRIALRAAIALAEDAAARLQKAWERGDALTAA 336 Query: 327 ISFEQMAQASVAVAEAKVLSTEVALQASEKLFELSGSAATLATHNLDRHWRNARVHTLHD 386 + + +VA+ E K+ + AL + K+FE+ G+ AT A + DR WRN RVHTLHD Sbjct: 337 ----ERGELAVAIYETKIAAARAALDITAKIFEVMGARATAAKYGFDRFWRNVRVHTLHD 392 Query: 387 PVRWKYFAVGNYALNGTPP 405 + +K VG + L G P Sbjct: 393 SLDYKLKDVGQWVLTGEVP 411 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.318 0.131 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 853,930 Number of extensions: 32199 Number of successful extensions: 107 Number of sequences better than 1.0e-08: 3 Number of HSP's gapped: 96 Number of HSP's successfully gapped: 3 Length of query: 411 Length of database: 1,221,021 Length adjustment: 86 Effective length of query: 325 Effective length of database: 903,079 Effective search space: 293500675 Effective search space used: 293500675 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 131 (55.1 bits)