BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4625.p
         (406 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152982863|ref|YP_001355300.1| hypothetical protein mma_3610 [...   105   4e-24
gi|152983033|ref|YP_001352592.1| hypothetical protein mma_0902 [...   100   1e-22

>gi|152982863|ref|YP_001355300.1| hypothetical protein mma_3610
           [Janthinobacterium sp. Marseille]
          Length = 194

 Score =  105 bits (263), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 80/144 (55%), Gaps = 1/144 (0%)

Query: 181 LANQLGMTPEQTKQAGMAGLLHDVGKMAVPLEILNKPAKLTEEEFASVRAHTVHGHGILQ 240
               +G++  ++   G+   +HD+GK+ +   +LNKP++LT  EF  ++ H + G+ +L 
Sbjct: 42  FGRYIGLSETESSLLGIGAGIHDIGKLCINEHVLNKPSRLTSAEFFFIKQHPMAGYQLLA 101

Query: 241 QIEGIGEAALDVSLHHHEKIDGSGYPFNLKADAISVMAKMGAVCDVYDAITSNRPYKAGW 300
            +E +     D  LHHHE  DGSGYP  L  + I + A++  + D YDAIT NRPY  G 
Sbjct: 102 PLE-LDTRVTDCVLHHHENFDGSGYPHGLAGENIPLFARIVRIWDSYDAITMNRPYHKGR 160

Query: 301 DPARSIRHMAASAGHFDPVTMEAF 324
            P+ ++  +      +DP  + +F
Sbjct: 161 SPSEALALLEKDKALYDPALLASF 184


>gi|152983033|ref|YP_001352592.1| hypothetical protein mma_0902
           [Janthinobacterium sp. Marseille]
          Length = 291

 Score =  100 bits (250), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 10/181 (5%)

Query: 152 DALISLARL----KTTDDYTYMHSVAVCAMMISLANQLGMTPEQTKQAGMAGLLHDVGKM 207
           D L+SL  +    +  D YT  H   V      LA +LGM+     +  + G LHD+GK+
Sbjct: 21  DLLVSLLIMAWVVEARDPYTGGHLWRVSRFAHRLALELGMSETDAARIAIGGFLHDLGKV 80

Query: 208 AVPLEILNKPAKLTEEEFASVRAHTVHGHGILQQ--IEGIGEAALDVSLHHHEKIDGSGY 265
            +P +ILNK  KL+EEE+  +R H   G  +L    +  I E A+     HHE  DG GY
Sbjct: 81  GIPDQILNKKDKLSEEEYDVIRTHPEIGWRMLANHPLAHIAEHAIRF---HHETPDGKGY 137

Query: 266 PFNLKADAISVMAKMGAVCDVYDAITSNRPYKAGWDPARSIRHMAASAG-HFDPVTMEAF 324
           P  ++   I V A++  +CD +DA+TS RPY+ G    +++  + +  G  FD +    F
Sbjct: 138 PTGIRGTDIPVEARIVGICDAFDAMTSTRPYRKGMPIEKALSIIESELGRQFDSIIGAKF 197

Query: 325 V 325
           V
Sbjct: 198 V 198


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.318    0.132    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 902,464
Number of extensions: 35542
Number of successful extensions: 116
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 114
Number of HSP's successfully gapped: 2
Length of query: 406
Length of database: 1,221,021
Length adjustment: 85
Effective length of query: 321
Effective length of database: 906,776
Effective search space: 291075096
Effective search space used: 291075096
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 131 (55.1 bits)