BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.4592.p (555 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152981164|ref|YP_001355224.1| putative ABC transporter ATP-bi... 1022 0.0 gi|152980787|ref|YP_001354212.1| ATP-binding ABC transporter pro... 334 8e-93 gi|152980982|ref|YP_001353691.1| ABC transporter ATPase [Janthin... 231 1e-61 gi|152981021|ref|YP_001353764.1| ABC transporter ATPase [Janthin... 221 1e-58 gi|152979961|ref|YP_001354796.1| spermidine/putrescine transport... 81 2e-16 >gi|152981164|ref|YP_001355224.1| putative ABC transporter ATP-binding protein [Janthinobacterium sp. Marseille] Length = 555 Score = 1022 bits (2643), Expect = 0.0, Method: Compositional matrix adjust. Identities = 497/554 (89%), Positives = 528/554 (95%) Query: 1 MAQYVFTMNRVGKIVPPKRQILKDISLSFFPGAKIGVLGLNGSGKSTLLKIMAGIDKEIE 60 MA YV+TMNRVGKIVPPKRQILKDISLSFFPGAKIGVLGLNGSGKSTLLKIMAGID +I Sbjct: 1 MANYVYTMNRVGKIVPPKRQILKDISLSFFPGAKIGVLGLNGSGKSTLLKIMAGIDTDII 60 Query: 61 GEAIPMPNLNIGYLPQEPQLDPDKTVRQEVESALGEVFEAQAKLDAVYAAYAEEDADFDA 120 GEA P PNLNIGYLPQEPQLDP++TVRQ VE LGEVFEA+AKL+ VYAAYAE DADFDA Sbjct: 61 GEARPAPNLNIGYLPQEPQLDPEQTVRQAVEGGLGEVFEAKAKLEEVYAAYAEPDADFDA 120 Query: 121 LATEQARLEAIIAAADGNSLNQQLEMAADALRLPPWDAKIGVLSGGEKRRVALCKLLLSK 180 LATEQARLEAII+ + G++ QQLEMAADALRLPPWDAKIGVLSGGEKRRVALC+LLLSK Sbjct: 121 LATEQARLEAIISTSAGDNPEQQLEMAADALRLPPWDAKIGVLSGGEKRRVALCRLLLSK 180 Query: 181 PDMLLLDEPTNHLDAESVDWLEQFLQRFPGTVVAITHDRYFLDNAAEWILELDRGHGIPW 240 PDMLLLDEPTNHLDAESVDWLEQFLQRFPGTVVAITHDRYFLDNAAEWILELDRGHGIPW Sbjct: 181 PDMLLLDEPTNHLDAESVDWLEQFLQRFPGTVVAITHDRYFLDNAAEWILELDRGHGIPW 240 Query: 241 KGNYSSWLEQKEARLKQEEASESARQKTIAKELEWVRQNPKGRQAKSKARLARFNELSEY 300 KGNYSSWLEQK RLKQEEASES+RQKTIAKELEWVRQNPKGRQAKSKARLARFNELSE+ Sbjct: 241 KGNYSSWLEQKGDRLKQEEASESSRQKTIAKELEWVRQNPKGRQAKSKARLARFNELSEH 300 Query: 301 EYQKRNETQEIFIPVAERLGNEVIEFKNVSKGYGDRLLIDDLNFKIPAGAIVGIIGPNGA 360 EYQKRNETQEIFIPVAERLGNEVIEFKNVSK +GDRLLID+L+F+IPAGAIVGIIGPNGA Sbjct: 301 EYQKRNETQEIFIPVAERLGNEVIEFKNVSKAFGDRLLIDNLSFRIPAGAIVGIIGPNGA 360 Query: 361 GKSTLFRMLAGRETPDSGEVVLGPTVKVSLVDQSREDLGNKKTVFEDVSGGADILTVGRF 420 GKSTLF+M+ G+E PDSGEVV+G T KVS+VDQSR+ L + KTVFEDV+GGADILTVGRF Sbjct: 361 GKSTLFKMITGKEQPDSGEVVIGTTAKVSIVDQSRDTLNDGKTVFEDVTGGADILTVGRF 420 Query: 421 EMPSRAYLGRFNFKGGDQQKIVGNLSGGERGRLHLAKTLLQGGNVLLLDEPSNDLDVETL 480 EMPSRAYLGRFNFKGGDQQKIVGNLSGGERGRLHLAKTLL GGNVLLLDEPSNDLDVETL Sbjct: 421 EMPSRAYLGRFNFKGGDQQKIVGNLSGGERGRLHLAKTLLMGGNVLLLDEPSNDLDVETL 480 Query: 481 RALEDALLEFAGTVLVISHDRWFLDRIATHIIAFEGDSQVTFFDGNYQEYEADKKKRLGE 540 RALEDALLEFAG+VLVISHDRWFLDRIATHI+AFEG+SQV+FFDGNYQEYEADK+KRLGE Sbjct: 481 RALEDALLEFAGSVLVISHDRWFLDRIATHILAFEGNSQVSFFDGNYQEYEADKRKRLGE 540 Query: 541 EAAKPKRIRYKPVT 554 E AKPKRIRYKP+T Sbjct: 541 EGAKPKRIRYKPLT 554 >gi|152980787|ref|YP_001354212.1| ATP-binding ABC transporter protein [Janthinobacterium sp. Marseille] Length = 636 Score = 334 bits (857), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 201/554 (36%), Positives = 315/554 (56%), Gaps = 26/554 (4%) Query: 21 ILKDISLSFFPGAKIGVLGLNGSGKSTLLKIMAGIDKEIEGEAIPMPNLNIGYLPQEPQL 80 +L S ++G++G NG+GKS+LLKI+AG K +G + + I Y+ QEP Sbjct: 18 LLDHAEFSLETTERVGLIGRNGTGKSSLLKIIAGRSKLDDGLFVMQQGIKIAYVEQEPHF 77 Query: 81 DPDKTVRQEVESALGEVFEAQAKLDAVYAAYAEEDADFDALATEQARLEAIIAAADGNSL 140 P+ +V V S +G++ A+ DA+ + ++ D AL ++ + AAD +L Sbjct: 78 SPEMSVFDAVASGMGDMQALLAEYDALTGQFGGDNDD--ALMERMHEIQLKLDAADAWNL 135 Query: 141 NQQLEMAADALRLPPWDAKIGVLSGGEKRRVALCKLLLSKPDMLLLDEPTNHLDAESVDW 200 ++E D L L DA +G LSGG ++RVAL L+S PD+LLLDEPTNHLD S+ W Sbjct: 136 TNKVEATLDRLNLVK-DALMGTLSGGMQKRVALACALVSAPDVLLLDEPTNHLDFTSILW 194 Query: 201 LEQFLQRFPGTVVAITHDRYFLDNAAEWILELDRGHGIPWKGNYSSWLEQKEARLKQEEA 260 LE L+ + G+V+ ITHDR FLDN A I+ELDRG + + GN+S++ +K +L+ EE Sbjct: 195 LEGLLRDYKGSVLFITHDRSFLDNVATRIIELDRGRLLSFPGNFSAYQVRKAEQLEIEEV 254 Query: 261 SESARQKTIAKELEWVRQNPKGRQAKSKARLARFNELSEYEYQKRNETQEIFIPVA--ER 318 + K +A+E W+R+ + R+ + + R+ R L +R + ++ + V+ +R Sbjct: 255 ENAKFDKFLAQEEIWIRKGVQARRTRDEGRVRRLEALRLTRSARREQQGQVKLDVSSGDR 314 Query: 319 LGNEVIEFKNVSKGYGDRLLIDDLNFKIPAGAIVGIIGPNGAGKSTLFRMLAGRETPDSG 378 G V E +N++K YGD++++ D + + G +G+IG NGAGK+TL +M+ G E PDSG Sbjct: 315 SGKIVAELENINKTYGDKVIVRDFSATLLRGDKIGLIGLNGAGKTTLLKMILGEEEPDSG 374 Query: 379 EVVLGPTVKVSLVDQSREDLGNKKTVFEDVSGGADILTVGRFEMPSRAYLGRFNFKGGDQ 438 V G ++++ DQ R L + ++ + ++ G+D + + YL F F Sbjct: 375 TVKQGTKLQIAYFDQMRAQLNEEASLADTIAPGSDWVEINGQRKHVMTYLNDFLFAPERA 434 Query: 439 QKIVGNLSGGERGRLHLAKTLLQGGNVLLLDEPSNDLDVETLRALEDALLEFAGTVLVIS 498 + V +LSGGER RL LA+ + NVL+LDEP+NDLD++TL LE+ L ++ GTV ++S Sbjct: 435 RSPVKSLSGGERNRLLLARLFAKPANVLVLDEPTNDLDIDTLELLEELLEDYKGTVFLVS 494 Query: 499 HDRWFLDRIATHIIAFEGDSQVTFFDGNYQEYE-----------------ADKKKRLGEE 541 HDR FLD + T +I EG+ + G Y ++E A+ K + E Sbjct: 495 HDRTFLDNVVTQVIVAEGNGLWREYIGGYSDWERVRPAAIPAGSPKPAAKAEVKAEVATE 554 Query: 542 AAKP----KRIRYK 551 AA P K++ YK Sbjct: 555 AAAPVAKQKKLSYK 568 >gi|152980982|ref|YP_001353691.1| ABC transporter ATPase [Janthinobacterium sp. Marseille] Length = 508 Score = 231 bits (588), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 164/511 (32%), Positives = 262/511 (51%), Gaps = 23/511 (4%) Query: 32 GAKIGVLGLNGSGKSTLLKIMAGIDKEIEGEAIPMPNLNIGYLPQEPQLDPDKTVRQEVE 91 G + G++G NG GKST +KI+ G G + PN +G L Q+ + V V Sbjct: 2 GNRYGLIGANGCGKSTFMKILGGDLDPSAGTVMLDPNERLGKLRQDQFAFEEMRVLDVVM 61 Query: 92 SALGEVFEAQAKLDAVYAAYAEEDADFDALATEQARLEAIIAAADGNSLNQ---QLEMAA 148 E++ A A+ DA+YA D D+ + A LEA A DG + +L + A Sbjct: 62 MGHTEMWAAMAERDAIYANPDATDDDY----MKAADLEAKFAEYDGYTAESRAGELLLGA 117 Query: 149 DALRLPPWDAKIGVLSGGEKRRVALCKLLLSKPDMLLLDEPTNHLDAESVDWLEQFLQRF 208 + + + +S G K RV L + L S PD+LLLDEPTN+LD ++ WLE L Sbjct: 118 -GVAIDLHQGPMSNVSPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNER 176 Query: 209 PGTVVAITHDRYFLDNAAEWILELDRGHGIPWKGNYSSWLEQKEARLKQEEASESARQKT 268 T++ I+HDR+FL+ + ++D G + GNY ++ Q+ A+ + + Sbjct: 177 NSTMIIISHDRHFLNQVCTHVADMDYGTLKIYPGNYDDYMFASTQARNQQLANNAKAKDK 236 Query: 269 IAKELEWVRQ----NPKGRQAKSKARLARFNELSEYEYQKRNETQEIFIPVAERLGNEVI 324 +A+ E+VR+ K RQA S+A+ ++ + + R + ++L + Sbjct: 237 VAELQEFVRRFAANKSKARQATSRAKQIEKIKVDDIKPSSR-AYPFVRFDGEKKLHRLAV 295 Query: 325 EFKNVSKGYGDRLLIDDLNFKIPAGAIVGIIGPNGAGKSTLFRMLAGRE----TPDSGEV 380 E + +SK + DR L + + + AG + IIG NGAGK+TL R + G + + D G V Sbjct: 296 EAETISKAF-DRQLFKNFSIMVEAGERIAIIGANGAGKTTLLRCIGGEDISGLSADQGRV 354 Query: 381 VLGPTVKVSLVDQS-REDLGNKKTVFEDVSGGADILTVGRFEMPSRAYLGRFNFKGGDQQ 439 V + Q ED + K + + + G + R+ LGR F G D + Sbjct: 355 KWAENANVGYMPQDPTEDFASDKNLTDWM---GQWTQEGDDDQAVRSILGRLLFGGDDVK 411 Query: 440 KIVGNLSGGERGRLHLAKTLLQGGNVLLLDEPSNDLDVETLRALEDALLEFAGTVLVISH 499 K V LSGGE+GR+ K +L NVLL+DEP+N +D+E++ +L AL ++AGT++ +SH Sbjct: 412 KSVKVLSGGEKGRMTYGKLMLGRHNVLLMDEPTNHMDMESIESLNIALEKYAGTLIFVSH 471 Query: 500 DRWFLDRIATHIIAFEGDSQVTFFDGNYQEY 530 DR F+ +AT ++ + D ++ F G Y+EY Sbjct: 472 DREFVSSLATRVLEVK-DGEIIDFQGTYEEY 501 Score = 112 bits (279), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 71/237 (29%), Positives = 118/237 (49%), Gaps = 41/237 (17%) Query: 19 RQILKDISLSFFPGAKIGVLGLNGSGKSTLLKIMAGID----KEIEGEAIPMPNLNIGYL 74 RQ+ K+ S+ G +I ++G NG+GK+TLL+ + G D +G N N+GY+ Sbjct: 306 RQLFKNFSIMVEAGERIAIIGANGAGKTTLLRCIGGEDISGLSADQGRVKWAENANVGYM 365 Query: 75 PQEPQLDPDKTVRQEVESALGEVFEAQAKLDAVYAAYAEEDADFDALATEQARLEAIIAA 134 PQ+P D F + L + +E D A+ Sbjct: 366 PQDPTED----------------FASDKNLTDWMGQWTQEGDDDQAV------------- 396 Query: 135 ADGNSLNQQLEMAADALRLPPWDAKIGVLSGGEKRRVALCKLLLSKPDMLLLDEPTNHLD 194 S+ +L D ++ + VLSGGEK R+ KL+L + ++LL+DEPTNH+D Sbjct: 397 ---RSILGRLLFGGDDVK-----KSVKVLSGGEKGRMTYGKLMLGRHNVLLMDEPTNHMD 448 Query: 195 AESVDWLEQFLQRFPGTVVAITHDRYFLDNAAEWILELDRGHGIPWKGNYSSWLEQK 251 ES++ L L+++ GT++ ++HDR F+ + A +LE+ G I ++G Y +L + Sbjct: 449 MESIESLNIALEKYAGTLIFVSHDREFVSSLATRVLEVKDGEIIDFQGTYEEYLTSQ 505 >gi|152981021|ref|YP_001353764.1| ABC transporter ATPase [Janthinobacterium sp. Marseille] Length = 657 Score = 221 bits (562), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 168/542 (30%), Positives = 278/542 (51%), Gaps = 54/542 (9%) Query: 19 RQILKDISLSFFPGAKIGVLGLNGSGKSTLLKIMAGIDKEIEGE--AIPMPN-LNIGYLP 75 + +L ++ ++ PG KIG++G NG+GKS+L ++ G E+ + I P+ + Y+ Sbjct: 5 KPLLDNVDVTLNPGDKIGLIGANGAGKSSLFGLLRG---ELHADLGTIDFPSKWRVAYVA 61 Query: 76 QE-PQLDPDKTVRQEVESAL-GEVFEAQAKLDAVYAAYAEEDADFDALATEQARLEAIIA 133 QE P L+ R ++ A+ G+V + + + + + D L E L + +A Sbjct: 62 QETPPLE-----RSAIDYAIDGDVTLRRLEEELAFLESEPDTLDNGVLIGE---LYSALA 113 Query: 134 AADGNSLNQQLE--MAADALRLPPWDAKIGVLSGGEKRRVALCKLLLSKPDMLLLDEPTN 191 AD ++ + E + + D + SGG + R+ L + L+ D+LLLDEPTN Sbjct: 114 DADAYTVRSRAEQLLLGLGFTMAQMDQPVASFSGGWRMRLNLAQALMCPSDLLLLDEPTN 173 Query: 192 HLDAESVDWLEQFLQRFPGTVVAITHDRYFLDNAAEWILELDRGHGIPWKGNYSSWLEQK 251 HLD +++ WLE +L+R+ GT++ I+HDR FLD I+ +D + GNYS + Q+ Sbjct: 174 HLDLDAIIWLEDWLKRYAGTLIVISHDRDFLDGVVNVIVHIDERKLKRYSGNYSGFERQR 233 Query: 252 EAR--LKQEEASESARQKTIAKEL--EWVRQNPKGRQAKSKAR-LARFNEL------SEY 300 A+ L Q + ARQ+ + + Q K RQA+S+ + L++ EL +E+ Sbjct: 234 AAQMILAQSAMEKQARQRAHLESFINRFKAQASKARQAQSRMKALSKMEELAPLRAAAEF 293 Query: 301 EYQKRNETQEIFIPVAERLGNEVIEFKNVSKGY----------GDRLLIDDLNFKIPAGA 350 ++ R N ++ ++V GY ++ ++ +NF + G Sbjct: 294 SFEFREPANA---------PNPLLVMEDVDAGYRIEDEKDYSITEKKIVSGINFSLQIGQ 344 Query: 351 IVGIIGPNGAGKSTLFRMLAGRETPDSGEVVLGPTVKVSLVDQSR-EDLGNKKTVFEDVS 409 +G++G NGAGKSTL + +AG P +G G + + Q + E L ++++ ++ Sbjct: 345 RIGLLGVNGAGKSTLIKTIAGELEPLNGSSQFGKGLAIGYFAQHQVEMLRHEESPLWHLA 404 Query: 410 GGADILTVGRFEMPSRAYLGRFNFKGGDQQKIVGNLSGGERGRLHLAKTLLQGGNVLLLD 469 A TV E+ R +LG FNF G + SGGE+ RL LA + Q N+LLLD Sbjct: 405 HIAP--TVREQEL--RNFLGSFNFNGAMVTSKIAPFSGGEKARLALALIVWQRPNLLLLD 460 Query: 470 EPSNDLDVETLRALEDALLEFAGTVLVISHDRWFLDRIATHIIAFEGDSQVTFFDGNYQE 529 EP+N LD+ET AL AL +F GT++V+SHDR L R T D ++ FDG+ + Sbjct: 461 EPTNHLDLETREALTMALAQFEGTLVVVSHDRHLL-RATTDQFIIVADGKLQPFDGDLDD 519 Query: 530 YE 531 Y+ Sbjct: 520 YK 521 >gi|152979961|ref|YP_001354796.1| spermidine/putrescine transport system ATP-binding protein [Janthinobacterium sp. Marseille] Length = 366 Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 63/236 (26%), Positives = 114/236 (48%), Gaps = 32/236 (13%) Query: 323 VIEFKNVSKGYGDRLLIDDLNFKIPAGAIVGIIGPNGAGKSTLFRMLAGRETPDSGEVVL 382 ++E +N+++ +GD ++D+++ I AG ++GP+G GK+TL RM+AG + PD+G+++L Sbjct: 3 LLEIRNLTRRFGDNTVVDNISLSIEAGEFFTLLGPSGCGKTTLLRMIAGFDVPDAGQILL 62 Query: 383 GPTVKVSLVDQSREDLGNKKTVFEDVSGGADILTVGRFEMPSRAYLGRFNFKGGDQQKIV 442 + + R +TVF++ + + G P L N + QK V Sbjct: 63 DGVDLTGVPPEQRP----VRTVFQNYALFPHMTVGGNIAFP----LEMANTPKAEIQKKV 114 Query: 443 -----------------GNLSGGERGRLHLAKTLLQGGNVLLLDEPSNDLDVETLRALED 485 LSGG+R R+ +A+ L+ +LLLDEP + LD + ++ Sbjct: 115 DEALEDVRLTGFAARYPHELSGGQRQRVSIARALVTRPKLLLLDEPLSALDAQLREQMQI 174 Query: 486 ALL----EFAGTVLVISHDRWFLDRIA-THIIAFEGDSQVTFFDGNYQEYEADKKK 536 L+ E T + ++HD+ + +A +H IA QV D + Y + + Sbjct: 175 ELINLQKEVGITFIYVTHDQA--EALALSHRIAVMNKGQVEQLDEPTRIYSYPRSR 228 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.316 0.136 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 1,207,865 Number of extensions: 48802 Number of successful extensions: 443 Number of sequences better than 1.0e-08: 45 Number of HSP's gapped: 396 Number of HSP's successfully gapped: 57 Length of query: 555 Length of database: 1,221,021 Length adjustment: 88 Effective length of query: 467 Effective length of database: 895,685 Effective search space: 418284895 Effective search space used: 418284895 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 132 (55.5 bits)