BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4584.p
         (199 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152983033|ref|YP_001352592.1| hypothetical protein mma_0902 [...    97   7e-22
gi|152982863|ref|YP_001355300.1| hypothetical protein mma_3610 [...    92   2e-20

>gi|152983033|ref|YP_001352592.1| hypothetical protein mma_0902
           [Janthinobacterium sp. Marseille]
          Length = 291

 Score = 97.1 bits (240), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 87/170 (51%)

Query: 25  DGYTPNHEDQTAELAVMIGQHLNLPRGRIDVLHMAAQVHDIGKARIPLDLLTKPGRITAD 84
           D YT  H  + +  A  +   L +       + +   +HD+GK  IP  +L K  +++ +
Sbjct: 37  DPYTGGHLWRVSRFAHRLALELGMSETDAARIAIGGFLHDLGKVGIPDQILNKKDKLSEE 96

Query: 85  EYGVLKTHVQFGYEILNKISFPFNLAEIVWCHHEYLDGSGYPRGIGAEALPLEARILTVA 144
           EY V++TH + G+ +L            +  HHE  DG GYP GI    +P+EARI+ + 
Sbjct: 97  EYDVIRTHPEIGWRMLANHPLAHIAEHAIRFHHETPDGKGYPTGIRGTDIPVEARIVGIC 156

Query: 145 DIVESMSADRPYRKSLGMRVALEEIQRQSGSRLDPMVVEACVQVVKQQNW 194
           D  ++M++ RPYRK + +  AL  I+ + G + D ++    V + K  +W
Sbjct: 157 DAFDAMTSTRPYRKGMPIEKALSIIESELGRQFDSIIGAKFVALGKLGHW 206


>gi|152982863|ref|YP_001355300.1| hypothetical protein mma_3610
           [Janthinobacterium sp. Marseille]
          Length = 194

 Score = 92.0 bits (227), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 4/170 (2%)

Query: 26  GYTPNHEDQTAEL---AVMIGQHLNLPRGRIDVLHMAAQVHDIGKARIPLDLLTKPGRIT 82
           G  P+  D    L       G+++ L      +L + A +HDIGK  I   +L KP R+T
Sbjct: 23  GRDPDLADHLQRLDSKTTQFGRYIGLSETESSLLGIGAGIHDIGKLCINEHVLNKPSRLT 82

Query: 83  ADEYGVLKTHVQFGYEILNKISFPFNLAEIVWCHHEYLDGSGYPRGIGAEALPLEARILT 142
           + E+  +K H   GY++L  +     + + V  HHE  DGSGYP G+  E +PL ARI+ 
Sbjct: 83  SAEFFFIKQHPMAGYQLLAPLELDTRVTDCVLHHHENFDGSGYPHGLAGENIPLFARIVR 142

Query: 143 VADIVESMSADRPYRKSLGMRVALEEIQRQSGSRLDPMVVEACVQVVKQQ 192
           + D  ++++ +RPY K      AL  +++   +  DP ++ +   ++ + 
Sbjct: 143 IWDSYDAITMNRPYHKGRSPSEALALLEKDK-ALYDPALLASFSSMMSES 191


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.321    0.137    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 463,883
Number of extensions: 18462
Number of successful extensions: 40
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 39
Number of HSP's successfully gapped: 2
Length of query: 199
Length of database: 1,221,021
Length adjustment: 79
Effective length of query: 120
Effective length of database: 928,958
Effective search space: 111474960
Effective search space used: 111474960
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 127 (53.5 bits)