BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4566.p
         (200 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980925|ref|YP_001354591.1| 2-hydroxychromene-2-carboxylate...    76   1e-15

>gi|152980925|ref|YP_001354591.1| 2-hydroxychromene-2-carboxylate
           isomerase [Janthinobacterium sp. Marseille]
          Length = 200

 Score = 76.3 bits (186), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 8/202 (3%)

Query: 1   MSNPIDFYFDFSSPYGYFAAVEIDKLAARHGRSVNWHPILLGPIFKALGTNSLVNIPLKG 60
           M+   ++YF   SP+ YF    +  LA ++   ++  PI L  +F   G   L   P + 
Sbjct: 1   MAKICEYYFAPQSPWAYFGHARLIALAKQYDVQIDMKPIDLPKLFSVSGGLPLAKRPPQR 60

Query: 61  E-YSKHDMER-TARFHNIFYQAPSNFPIGSQVAAR---ATLWVQQTQPAKAVDLIKTLYS 115
           + Y   +++R +A         P   P     A++   AT +   T    A++L  ++  
Sbjct: 61  QAYRLVELKRWSAHLGLPLNLQPKFSPASGDAASKLIIATKFAHGTD--AALELTSSIMH 118

Query: 116 AYFTEDIDISVTDHVLRIAADAGIDRHALEAALASPELKEQLRQRTDAAAKAGVFGSPFM 175
           A++ +D +I   D +  +A+ AG D  AL  A  +  ++ +  Q T+ A  A VFG+P+ 
Sbjct: 119 AFWADDKNIMDADTLAGLASAAGHDGAALVKASETTSVQNEYEQFTNDAMAASVFGAPWY 178

Query: 176 IVDGEAFWGFDRFTQLE-AFLK 196
           IVDGEAFWG DR   +E AF K
Sbjct: 179 IVDGEAFWGQDRLEFVERAFQK 200


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.322    0.136    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 474,295
Number of extensions: 18588
Number of successful extensions: 67
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 66
Number of HSP's successfully gapped: 1
Length of query: 200
Length of database: 1,221,021
Length adjustment: 79
Effective length of query: 121
Effective length of database: 928,958
Effective search space: 112403918
Effective search space used: 112403918
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 127 (53.5 bits)