BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4550.p
         (307 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981090|ref|YP_001351892.1| hypothetical protein mma_0202 [...   404   e-114
gi|152981473|ref|YP_001353041.1| uroporphyrin-III C/tetrapyrrole...    83   2e-17

>gi|152981090|ref|YP_001351892.1| hypothetical protein mma_0202
           [Janthinobacterium sp. Marseille]
          Length = 307

 Score =  404 bits (1039), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 200/293 (68%), Positives = 230/293 (78%), Gaps = 1/293 (0%)

Query: 11  ILQDAAQQTYPVSALYVLATPIGNVCDISLRGLHVLALADAVACEDTRNTSQLLQRYGLS 70
           I+ D + QTYP + LYV+ATPIGN  DISLR LH L++ DAVACEDTRNT  LL RYGLS
Sbjct: 14  IMHDVSHQTYPSATLYVVATPIGNAGDISLRALHTLSIVDAVACEDTRNTGHLLTRYGLS 73

Query: 71  KQLLATHEHNEREAAAKIIERLQAGQRVALVSDAGTPAVSDPGARVVDAVRAAGFQVIPL 130
           K L+A H+HNERE A K+I RLQAG+R+ALVSDAGTPAVSDPGAR+VDAVR AG +VIPL
Sbjct: 74  KNLIAAHQHNEREVADKLIARLQAGERIALVSDAGTPAVSDPGARIVDAVRNAGLRVIPL 133

Query: 131 PGASAAVTALSASGLADARFLFVGFLPAKTRQRETALQELVDQQAALVFYEAPHRIVETV 190
           PGASAAVTALSASGL + +F FVGFLPAK +QRET L  L    A +VFYEAPHRI ETV
Sbjct: 134 PGASAAVTALSASGLLNDQFYFVGFLPAKAKQRETFLFGLQAIAATMVFYEAPHRITETV 193

Query: 191 QSMLQVFGPTRQVVLARELTKLFEHIHRCPLGEAPAWLEQDANRQRGEFVVLLEGAQPVE 250
            ++   F  TR +V ARELTKLFE  HRC L EA  W+  D NRQ+GEFVVLLEGA    
Sbjct: 194 AALAAAFELTRHIVFARELTKLFEETHRCTLAEAVTWINADPNRQKGEFVVLLEGAPSAG 253

Query: 251 GED-AEGERVLRILLEELPVKQAAALAAQITGQKKNALYERALQIRQGAQEDD 302
            +D  E ER+L ILLEE  VKQAAALAAQITGQKKNALYERALQ++  +++D+
Sbjct: 254 DQDQIEAERILGILLEECSVKQAAALAAQITGQKKNALYERALQMKNASEQDE 306


>gi|152981473|ref|YP_001353041.1| uroporphyrin-III C/tetrapyrrole
           (corrin/porphyrin) methyltransferase [Janthinobacterium
           sp. Marseille]
          Length = 251

 Score = 83.2 bits (204), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 91/181 (50%), Gaps = 15/181 (8%)

Query: 44  HVLALADAVACEDTRNTSQLLQRYGLSKQLLAT----------HEHNEREAAAKIIERLQ 93
           ++ A  D    E+ + T   L+  G ++  LA           + + E +A   ++E + 
Sbjct: 33  NITARLDYFVAENAKTTRAFLKLIG-TRNTLAKPIQEIRIAELNVNTEAKALPALLEPML 91

Query: 94  AGQRVALVSDAGTPAVSDPGARVVDAVRAAGFQVIPLPGASAAVTALSASGLADARFLFV 153
           AGQ   L+S+AG PAV+DPGA +V    A G QV PL G S+ + A+ ASGL+   F F 
Sbjct: 92  AGQDAGLISEAGVPAVADPGANLVRLAHARGIQVKPLVGPSSLLLAVMASGLSGQNFAFN 151

Query: 154 GFLPAKTRQRETALQELVD----QQAALVFYEAPHRIVETVQSMLQVFGPTRQVVLAREL 209
           G+LP     R   +++L D    ++    F E P+R    +++++    P   + +A +L
Sbjct: 152 GYLPIDAAARSKRIKQLEDRSRQEKQTQFFIETPYRNAGLLETLVNTCNPNTLLSIATDL 211

Query: 210 T 210
           T
Sbjct: 212 T 212


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.317    0.131    0.359 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 619,984
Number of extensions: 23499
Number of successful extensions: 112
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 110
Number of HSP's successfully gapped: 2
Length of query: 307
Length of database: 1,221,021
Length adjustment: 83
Effective length of query: 224
Effective length of database: 914,170
Effective search space: 204774080
Effective search space used: 204774080
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 129 (54.3 bits)