BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4539.p
         (330 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980139|ref|YP_001354176.1| taurine dioxygenase [Janthinoba...   342   1e-95

>gi|152980139|ref|YP_001354176.1| taurine dioxygenase
           [Janthinobacterium sp. Marseille]
          Length = 297

 Score =  342 bits (878), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 166/280 (59%), Positives = 210/280 (75%)

Query: 50  FEILPFDAPLGAEIIGLDLNLPISAQELARIRSALVNHGVLVFRDQRITPQQHIDFSRRF 109
           F I  FDAPLGAE+IGLDL  P+   + +R+  A ++H +LVFRDQ+ITP Q IDFSRRF
Sbjct: 17  FTIQLFDAPLGAELIGLDLTRPLDDADFSRVHQAHLDHHLLVFRDQQITPAQQIDFSRRF 76

Query: 110 GPLQVHVLNRFHLAGHPEILIVSNVVENGKPIGLVDAGADWHSDLSYMPKPSLGALLHSQ 169
           G LQ+HVL++F L GHPEILI+SN+ ENG+PIGL DAG  WHSDLSY+  PSLG++LH+Q
Sbjct: 77  GALQIHVLHQFQLPGHPEILIISNIKENGQPIGLGDAGHFWHSDLSYVDIPSLGSMLHAQ 136

Query: 170 ELPAERGDTLYANTADAWDTLPAALKTLLAGKRAVHSYVYRYERLRKLSPWRAPLTQQQI 229
           ELPAE GDTL+AN   AWDTL   L+  +A  +A HSY+ +Y  L++ +PWR  L+++QI
Sbjct: 137 ELPAEGGDTLFANMHLAWDTLDVHLRNKVANLKAEHSYLAQYAELQRRNPWRPNLSEEQI 196

Query: 230 DEVPPVEHPVVITHPESGRQILFVSEGFTSHIVGIPRDESDALLKELHAHITRPSNLYTH 289
            +V PV  PVV THPE+GR+ LFVSE FT+ I G+P DES  LL +L  H  +P ++Y H
Sbjct: 197 AKVKPVLQPVVRTHPETGRKALFVSEHFTTRIDGLPEDESRDLLNQLFEHSVKPEHVYRH 256

Query: 290 KWQAHDLVFWDNRSTQHYAAITPQHLRRTLYRTTVEGDVP 329
           +WQ HDL+FWDNRS  H AA  P+  RR LYRTT+EGDVP
Sbjct: 257 RWQPHDLIFWDNRSLMHLAAGCPEDQRRKLYRTTIEGDVP 296


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.320    0.136    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 845,842
Number of extensions: 37817
Number of successful extensions: 79
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 79
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 1,221,021
Length adjustment: 84
Effective length of query: 246
Effective length of database: 910,473
Effective search space: 223976358
Effective search space used: 223976358
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 130 (54.7 bits)