BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.4529.p (442 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152979966|ref|YP_001354181.1| beta alanine--pyruvate transami... 520 e-149 gi|152980665|ref|YP_001351810.1| adenosylmethionine--8-amino-7-o... 195 4e-51 gi|152980626|ref|YP_001351837.1| ornithine aminotransferase [Jan... 143 2e-35 gi|152980209|ref|YP_001352373.1| acetylornithine transaminase pr... 116 2e-27 gi|152979840|ref|YP_001354649.1| glutamate-1-semialdehyde 2,1-am... 108 9e-25 >gi|152979966|ref|YP_001354181.1| beta alanine--pyruvate transaminase [Janthinobacterium sp. Marseille] Length = 439 Score = 520 bits (1340), Expect = e-149, Method: Compositional matrix adjust. Identities = 271/439 (61%), Positives = 328/439 (74%), Gaps = 6/439 (1%) Query: 7 SHPSSLSAYWMPFTANRNFKAAPRMLVSAEGMHYRDDAGNAILDGTAGLWCVPLGHAHPK 66 S P S WMPFTANR FKA PRMLV+A GM+Y D G ILDGTAGLWCV GH HPK Sbjct: 2 SQPLDTSHLWMPFTANRQFKAKPRMLVAASGMYYTSDDGRQILDGTAGLWCVNAGHGHPK 61 Query: 67 IVSAVQKSVATLDYAPSFQLGHPSAFELAERLKAYTGNRFAHVFYTGSGSESVDTALKIA 126 I A+QK A++DYAP FQ+GHP AFE A L VF+ GSE VDTALKIA Sbjct: 62 ITEAIQKQAASMDYAPLFQIGHPLAFEAATALAEIAPAGLNRVFFCNDGSEGVDTALKIA 121 Query: 127 LAYHRAKGNATRTRLIGRERGYHGVGFGGMSVGGIGGNRKTFSTALLPGVDHLPHTHNLE 186 LAYHR +G+A RTRLIGRER YHGVGFGG++VGGI GNRK F L DHL H ++ Sbjct: 122 LAYHRIRGDAGRTRLIGRERAYHGVGFGGIAVGGIAGNRKQFGPGL--AADHLRHPLDIA 179 Query: 187 KNAFTKGEPEYGAHLADELE-RLVTLHDASNIAAVIVEPVAGSTGVLIPPKGYLKRLREI 245 KNA+++G P +GA +ADELE RL+ LHD S +AAVIVEP+ GSTGV++PPKGYL++LR I Sbjct: 180 KNAYSRGLPLHGAEMADELEQRLLALHDPSTVAAVIVEPLQGSTGVILPPKGYLEKLRVI 239 Query: 246 CTKHGILLIFDEVITGFGRLGTPFASDYFDVEPDIFTTAKGLTNGVVPMGAVFVKKEIHD 305 C KHG+LLIFDEVITGFGRLGT F +D+F V+PD+ AK LTN VPMGAV V ++IH+ Sbjct: 240 CDKHGVLLIFDEVITGFGRLGTAFGADFFGVKPDMIVCAKALTNAAVPMGAVIVHEKIHE 299 Query: 306 AFMN-GP-DGIELFHGYTYSGHPLACAAGLASLEVFQTEGVLDNAQAVADYFQEAAHALR 363 FM P D IELFHGYTYSGHPLA AA +A+L+V++ E + A +A YF++AAH+L+ Sbjct: 300 TFMQMAPADSIELFHGYTYSGHPLAAAAAIATLDVYREEQLFQRAAGMAPYFEDAAHSLK 359 Query: 364 GLPHVIDVRTIGLIAGIELASLPGRVGARAYDAFVRAFND-GILIRVTGDIIALSPPLII 422 GLP V DVR +GL+AG+EL + G+ GARAY+ F +AF D G+L RVT DI+ALSPPLII Sbjct: 360 GLPFVKDVRNLGLVAGVELEGIAGKPGARAYELFTKAFWDKGLLTRVTADILALSPPLII 419 Query: 423 NKQQIDELFGKLAAILKTL 441 NK Q+DE+FG + ILK + Sbjct: 420 NKAQVDEMFGSITDILKGM 438 >gi|152980665|ref|YP_001351810.1| adenosylmethionine--8-amino-7-oxononanoate transaminase [Janthinobacterium sp. Marseille] Length = 450 Score = 195 bits (496), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 129/437 (29%), Positives = 211/437 (48%), Gaps = 12/437 (2%) Query: 11 SLSAYWMPFTANRNFKAAPRMLVS-AEGMHYRDDAGNAILDGTAGLWCVPLGHAHPKIVS 69 SL + W P T ++ + P + VS G D G LD + W GHA+P+I S Sbjct: 17 SLRSVWHPCTQMQHHETLPLIPVSHGRGAWLYDTDGQRYLDAISSWWVNMFGHANPRINS 76 Query: 70 AVQKSVATLDYAPSFQLGHPSAFELAERLKAYTGNRFAHVFYTGSGSESVDTALKIALAY 129 A++ + L++A H +L+E+L A T + H FY G+ +V+ ALK++ Sbjct: 77 ALRSQLDMLEHAMLAGFTHEPVVQLSEQLAARTNHELGHCFYASDGASAVEIALKMSFHS 136 Query: 130 HRAKGNATRTRLIGRERGYHGVGFGGMSVGGIGGNRKTFSTALLPGVDHLPHTHNLEKNA 189 R G + + + + YHG G ++V + R + L H + + A Sbjct: 137 WRNNGLSDKREFVCLKGSYHGETIGALAVTDVPIFRDAYDAML----QHAHVVMSPDARA 192 Query: 190 FTKGEP--EYGAHLADELERLVTLHDASNIAAVIVEP-VAGSTGVLIPPKGYLKRLREIC 246 GE + A LE L+ + +IAA+IVEP V +TG+ + YL+ +R +C Sbjct: 193 ARDGETAADVARRAASALETLLQ-ERSKHIAALIVEPLVQCATGMAMYDPVYLQEVRALC 251 Query: 247 TKHGILLIFDEVITGFGRLGTPFASDYFDVEPDIFTTAKGLTNGVVPMGAVFVKKEIHDA 306 K+ + LI DE+ G GR GT FA + V PD +KG++ G +P+ V + EI+ + Sbjct: 252 DKYQVHLIADEIAVGCGRTGTFFACEQAAVWPDFLCLSKGISGGYLPLSLVMTRDEIYQS 311 Query: 307 FMNGPDGIELFHGYTYSGHPLACAAGLASLEVFQTEGVLDNAQAVADYFQEAAHALRGLP 366 F +G H ++Y+G+PLAC A LA+L +F+ + V++ + A EA L P Sbjct: 312 FYHGDVTRGFLHSHSYTGNPLACRAALATLAIFEEDDVINANRLRAARLTEALAPLAAHP 371 Query: 367 HVIDVRTIGLIAGIELASLPGRVGARAYDA--FVRAFNDGILIRVTGDIIALSPPLIINK 424 V + R G+I + A + A + F A +L+R G + L PP I+N Sbjct: 372 QVSNFRQRGMIWAFD-AVIDNAEAASTFSRRFFTTALEHELLLRPIGPTVYLMPPYILNN 430 Query: 425 QQIDELFGKLAAILKTL 441 ++ID L + + + + Sbjct: 431 EEIDGLAARTQTVFEKV 447 >gi|152980626|ref|YP_001351837.1| ornithine aminotransferase [Janthinobacterium sp. Marseille] Length = 413 Score = 143 bits (360), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 128/428 (29%), Positives = 194/428 (45%), Gaps = 54/428 (12%) Query: 24 NFKAAPRMLVSAEGMHYRDDAGNAILDGTAGLWCVPLGHAHPKIVSAVQKSVATLDYAP- 82 N+ P +L G+ D+ G +D + V GH+HP++V A+ + L Sbjct: 21 NYAPLPVVLSKGRGIWLWDEDGKRYMDMMSAYSAVSFGHSHPQLVQALTQQAGQLAVTSR 80 Query: 83 ---SFQLGHPSAFELAERLKAYTGNRFAHVFYTGSGSESVDTALKIALAY-HRAKGNATR 138 + QLG + L TG SG+E+V+T+LK A + ++ KG + Sbjct: 81 AFYTDQLGR-----FLQLLCEMTG--MDKALPMNSGTEAVETSLKAARKWAYKVKGVPDQ 133 Query: 139 TRLIGRERGYHGVGFGGMSVGGIG-GNRKTFSTALLP---GVDHLPHTHNLEKNAFTKGE 194 I G F G S +G + + P G +P Sbjct: 134 QAQIIVCAG----NFAGRSTTIVGFSSEAQYREGFGPFDGGFVTIP-------------- 175 Query: 195 PEYGAHLADELERLVTLHDASNIAAVIVEPVAGSTGVLIPPKGYLKRLREICTKHGILLI 254 YG A LE +T H AA +VEP+ G G+++PP YL + REICT+ ILLI Sbjct: 176 --YGD--AAALEAAITPH----TAAFLVEPIQGEGGIIVPPDAYLAQCREICTRRNILLI 227 Query: 255 FDEVITGFGRLGTPFASDYFDVEPDIFTTAKGLTNGVVPMGAVFVKKEIHDAFMNGPDGI 314 DEV TG GR G A D+ + PD K L G++P+ A + E+ D F G Sbjct: 228 CDEVQTGLGRTGRLLACDHEGIRPDGLILGKALGGGLLPVSAFLARSEVMDVFTPGD--- 284 Query: 315 ELFHGYTYSGHPLACAAGLASLEVFQTEGVLDNAQAVADYFQEAAHALRGLPHVIDVRTI 374 HG T+ G+PLA A G A+L + + ++ A+ +E +ALR P + VR Sbjct: 285 ---HGSTFGGNPLAAAVGYAALSLLRDGELIAAAEQRGQRLREGLNALRH-PAIRSVRGK 340 Query: 375 GLIAGIELASLPGRVGARAYDAFVRAFNDGILIRVT-GDIIALSPPLIINKQQIDELFGK 433 GL+ G+EL P + AR++ R +G+L + T ++ +PPLII + ID Sbjct: 341 GLLIGLELE--PQVITARSF--CERLMENGVLSKETHHTVVRFAPPLIITAEAIDAALRI 396 Query: 434 LAAILKTL 441 + + +TL Sbjct: 397 IEHVFETL 404 >gi|152980209|ref|YP_001352373.1| acetylornithine transaminase protein [Janthinobacterium sp. Marseille] Length = 400 Score = 116 bits (291), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 114/417 (27%), Positives = 179/417 (42%), Gaps = 45/417 (10%) Query: 31 MLVSAEGMHYRDDAGNAILDGTAGLWCVPLGHAHPKIVSAVQKSVATL-DYAPSFQLGHP 89 + +GM D G LD G LGH+ I A+ L + +P+F P Sbjct: 21 VFTEGDGMWLTDHKGKRYLDYLQGWAVNCLGHSPQCIQDALNVQAKKLINPSPAF-YNEP 79 Query: 90 SAFELAERLKAYTGNR-FAHVFYTGSGSESVDTALKIALAYHRAKGNA---TRTRLIGRE 145 S LA L TGN F VF+ SG+E+ ++A+K+A + + NA R +I + Sbjct: 80 S-IALAALL---TGNSCFDRVFFANSGAEANESAVKLARKWGKLNKNAAGENRYEIITFD 135 Query: 146 RGYHGVGFGGMSVGGIGGNRKTFSTALLPGVDHLPHTHNLEKNAFTKGEPEYGAHLADEL 205 +HG MS G G ++ P K D + Sbjct: 136 HSFHGRTLATMSASGKAGWDTIYA----------PQVPGFFKATLND---------IDSV 176 Query: 206 ERLVTLHDASNIAAVIVEPVAGSTGVLIPPKGYLKRLREICTKHGILLIFDEVITGFGRL 265 ++L+T AV++EPV G GV+ + +++ LR + +HG+LLI DEV TG GR Sbjct: 177 KKLIT----DKTIAVMLEPVQGEGGVIPATREFMQALRALTKEHGVLLIVDEVQTGMGRT 232 Query: 266 GTPFASDYFDVEPDIFTTAKGLTNGVVPMGAVFVKKEIHDAFMNGPDGIELFHGYTYSGH 325 G F + PDI T KG+ G VP+ A+ ++EI F G G TY+G+ Sbjct: 233 GELFGYQLSGITPDIMTLGKGIGGG-VPLAAMLCREEIA-CFEPGD------QGGTYNGN 284 Query: 326 PLACAAGLASLEVFQTEGVLDNAQAVADYFQEAAHALRGLPHVIDVRTIGLIAGIELASL 385 PL A G A + G L + + Y A L + R GL+ ++L S Sbjct: 285 PLMTAVGNAVAQALLAPGFLQSVKDKGAYLSAALLKLTEKHGLAGERGDGLLRALKLGS- 343 Query: 386 PGRVGARAYDAFVRAFNDGILIRV-TGDIIALSPPLIINKQQIDELFGKLAAILKTL 441 +G + + G+L+ D++ P L + +++D++ L+ +L L Sbjct: 344 --DIGPQIVEKARDLEPVGLLLNSPRPDLLRFMPALNVTYEELDQMIEMLSGVLSEL 398 >gi|152979840|ref|YP_001354649.1| glutamate-1-semialdehyde 2,1-aminomutase [Janthinobacterium sp. Marseille] Length = 432 Score = 108 bits (269), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 99/337 (29%), Positives = 157/337 (46%), Gaps = 36/337 (10%) Query: 18 PFTANRNFKAAPRMLVSAEGMHYRDDAGNAILDGTAGLWCVPLGHAHPKIVSAVQKSVAT 77 P A R+ PR + AEG ++ D +D +GHAHP +V AVQ + Sbjct: 23 PVRAFRSVGGTPRFITKAEGPYFWDADDRRYIDYIGSWGPAIVGHAHPDVVKAVQDAATR 82 Query: 78 LDYAPSFQLGHPSAFELAERLKAYTGNRFAHVFYTGSGSESVDTALKIALAYHRAKGNAT 137 SF + E+AE + + V SG+E+ +AL++A +G Sbjct: 83 ---GLSFGAPTEAEIEMAELICRLVPS-IEQVRLVSSGTEAAMSALRLA------RGATG 132 Query: 138 RTRLIGRERGYHGVGFGGMSVGGIGGNRKTFSTALLPGV--DHLPHTHNLEKNAFTKGEP 195 R ++I E YHG + G G TF GV D HT L+ N +P Sbjct: 133 RDKIIKFEGCYHGHADSLLVKAGSG--LLTFGNPTSAGVPEDFAKHTLVLDYN-----DP 185 Query: 196 EYGAHLADELERLVTLHDASNIAAVIVEPVAGSTGVLIPPKGYLKRLREICTKHGILLIF 255 A L + + + +IA VIVEPVAG+ +L +L+ +R +CT++G ++I Sbjct: 186 ---AQLENVFKEM-----GDSIACVIVEPVAGNMNLLPATPEFLQTMRRVCTQYGAVMIL 237 Query: 256 DEVITGFGRLGTPFASDYFDVEPDIFTTAKGLTNGVVPMGAVFVKKEI--HDAFMNGPDG 313 DEV++GF R+ A + + PD+ K + G +P+ A + +I H A + G Sbjct: 238 DEVMSGF-RVALGGAQSLYGITPDLTVLGK-VIGGGLPVAAFGGRADIMRHLAPLGG--- 292 Query: 314 IELFHGYTYSGHPLACAAGLASLEVFQTEGVLDNAQA 350 ++ T SG+P+ AAG+A+L++ Q G +N A Sbjct: 293 --VYQAGTLSGNPVTVAAGMATLKLIQAPGFYENLTA 327 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.321 0.138 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 1,033,540 Number of extensions: 45010 Number of successful extensions: 135 Number of sequences better than 1.0e-08: 6 Number of HSP's gapped: 123 Number of HSP's successfully gapped: 6 Length of query: 442 Length of database: 1,221,021 Length adjustment: 86 Effective length of query: 356 Effective length of database: 903,079 Effective search space: 321496124 Effective search space used: 321496124 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 131 (55.1 bits)