BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4525.p
         (200 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152979935|ref|YP_001355131.1| bifunctionnal glucosamine-1-pho...    62   4e-11

>gi|152979935|ref|YP_001355131.1| bifunctionnal
           glucosamine-1-phosphate N-acetyltransferase /
           UDP-N-acetylglucosamine pyrophosphorylase
           [Janthinobacterium sp. Marseille]
          Length = 452

 Score = 61.6 bits (148), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 5/122 (4%)

Query: 74  IISADVFIGAHAYLRGGNWIDVNCSIGPGCELKSSFLFAESRLAHFNFIGDSIIGRDVNL 133
           ++ A+  IG +A LR G  +  +  IG   E+K+S + A S+  H  ++GDS +G  VN+
Sbjct: 314 VVGAECIIGPYARLRPGTVLAEDVHIGNFVEVKNSDIAAHSKANHLTYVGDSTVGSRVNI 373

Query: 134 EAGSVICNHRNERVDGDLVSTGITKFGAVVGDGSRLGANSVVAPGGLLQPGTLVGRGTVW 193
            AG++ CN+     DG   S  I +    VG  ++L A   V  G  L  GT + +    
Sbjct: 374 GAGTITCNY-----DGVNKSRTIIEDDVFVGSATQLIAPIRVGKGATLGAGTTLTKDAPA 428

Query: 194 DQ 195
           D+
Sbjct: 429 DK 430


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.320    0.137    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 483,559
Number of extensions: 19886
Number of successful extensions: 62
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 61
Number of HSP's successfully gapped: 1
Length of query: 200
Length of database: 1,221,021
Length adjustment: 79
Effective length of query: 121
Effective length of database: 928,958
Effective search space: 112403918
Effective search space used: 112403918
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 127 (53.5 bits)