BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4511.p
         (276 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152979847|ref|YP_001354170.1| nitrilase [Janthinobacterium sp...    70   1e-13
gi|152980407|ref|YP_001352526.1| nitrilase [Janthinobacterium sp...    65   4e-12
gi|152979996|ref|YP_001352840.1| NAD synthetase [Janthinobacteri...    61   6e-11

>gi|152979847|ref|YP_001354170.1| nitrilase [Janthinobacterium sp.
           Marseille]
          Length = 316

 Score = 70.5 bits (171), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 113/271 (41%), Gaps = 37/271 (13%)

Query: 7   HKED---NVARSIAFIDRAAAEGAALVVLPELVNTGYVFASRAEAFA--LAETSPDG--- 58
           H +D   + A+++  I +A   GA L+V PE    GY    +  +F   +    P+G   
Sbjct: 14  HPDDAQASTAKAVDLIGQAHRAGAGLLVFPEAFLGGY---PKGASFGAPVGMRKPEGRQA 70

Query: 59  -------------PTTLAWIEAARRNQIYIVAGIAEREGERLYNSAVVI-GPDGWLGVYR 104
                        P   A  EA R   ++ V G  ERE   LY + +   G  G +G +R
Sbjct: 71  YLDYFNNAIDLKGPEVEAIAEATRNTGMFAVIGCIERELGTLYCTVLFFNGAQGLVGKHR 130

Query: 105 KLHLWGDEHLFFEAGD-KGLPLFHTQWGRLGVAICYDGWFPEVYRLLAMQGADVVAIPT- 162
           KL     E L +  GD   +P+F T  G++G  IC++ + P +   +  QG  +   PT 
Sbjct: 131 KLMPTAGERLIWGFGDGSTMPVFDTPLGKIGAVICWENYMPMLRMYMYSQGIGIYCAPTA 190

Query: 163 ----NWVPMPGQPA--NREAMATSLAMANAHSNALNIVCANRIGTERGQPFI-GQSLIIG 215
                WVP     A   R  + T+       +      CA  +G +     + G S II 
Sbjct: 191 DDRDTWVPSMQHIALEGRCFVLTACQYIKRSAYPATHECA--LGDDPETVLMRGGSAIID 248

Query: 216 AQGWPLAGPASEDSEQVLYASINLKQTRQAR 246
             G  LAGP  E  E +LYA I+  Q  + +
Sbjct: 249 PLGKVLAGPNFE-GEALLYAEIDTDQIVRGK 278


>gi|152980407|ref|YP_001352526.1| nitrilase [Janthinobacterium sp.
           Marseille]
          Length = 269

 Score = 65.1 bits (157), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 23/219 (10%)

Query: 9   EDNVARSIAFIDRAAAEGAALVVLPELVNTGYVFASRAEAFALAETSPDGPTTLAWIEAA 68
           E+N+A +   I  AA +GA LV+LPE      +     +    AE    GP        A
Sbjct: 20  EENIATAKRLIAEAAQQGAQLVLLPEY--WAAMGMQETDKLGYAEQVDIGPIQSFMAATA 77

Query: 69  RRNQIYIVAG---IAEREGERLYNSAVVIGPDGW-LGVYRKLHLWG--------DEHLFF 116
           R +QI+++ G   +A    +++ N+ +V  P G  +  Y K+HL+         DE    
Sbjct: 78  REHQIWLIGGTLPLAADVADKVLNTMMVYNPAGERVKRYDKIHLFSFTKGEESYDEARTI 137

Query: 117 EAGDKGLPLFHTQWGRLGVAICYDGWFPEVYRLLAMQGADVVAIPTNWVPMPGQPANREA 176
             G++ +  F   +G++G+++CYD  FPE+YR  AM    ++ +P  +    G+     A
Sbjct: 138 VHGNE-VTTFDAPFGKVGLSVCYDLRFPELYR--AMGDCTLIVVPAAFTYTTGK-----A 189

Query: 177 MATSLAMANAHSNALNIVCANRIGTER-GQPFIGQSLII 214
               L  A A  N   ++ A + G  + G+   G S++I
Sbjct: 190 HWEILLRARAIENQCYVLAAAQGGRHKNGRTTWGHSMLI 228


>gi|152979996|ref|YP_001352840.1| NAD synthetase [Janthinobacterium
           sp. Marseille]
          Length = 537

 Score = 61.2 bits (147), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 96/220 (43%), Gaps = 14/220 (6%)

Query: 5   IGHKEDNVARSIAFIDRAAAEGAALVVLPELVNTGYVFASRAEAFALAETSPDGPTTLAW 64
           +G    N AR   F  RAA +GA +V+ PEL   GY         +    + +    LA 
Sbjct: 14  VGDLAGNRARIAEFSRRAAEQGADIVLTPELSLVGYPPEDLLLRQSFYAKTTETLLALAA 73

Query: 65  IEAARRNQIYIVAGIAEREGERLYNSAVVIGPDGWLGVYRKLHLWG----DEHLFFEAGD 120
             A       +V    E++G+R YN+A V+      G Y K  L      DE  +F + D
Sbjct: 74  DLAPLHGLHVVVGHPFEQDGQR-YNAASVLLNGKVAGTYCKHDLPNATVFDEKRYFTSVD 132

Query: 121 KGLPLFHTQWGRLGVAICYDGWFPEVYRLLAMQGADVVAIPTNWVPMPGQP--ANREAMA 178
           + L +F  +  R G+ IC D WFP      A  GA V+ +P       G P   N++ + 
Sbjct: 133 EPL-VFEVKGVRFGINICEDTWFPHAPARAAEAGAQVLLVPN------GSPFHMNKQHLR 185

Query: 179 TSLAMANAHSNALNIVCANRIGTERGQPFIGQSLIIGAQG 218
             +  AN   + +++V AN +G +    F G S ++   G
Sbjct: 186 VDVMHANVTVHGMSLVYANLVGGQDELIFDGNSFVLDQAG 225


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.321    0.137    0.431 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 691,543
Number of extensions: 28944
Number of successful extensions: 86
Number of sequences better than 1.0e-08: 3
Number of HSP's gapped: 85
Number of HSP's successfully gapped: 3
Length of query: 276
Length of database: 1,221,021
Length adjustment: 82
Effective length of query: 194
Effective length of database: 917,867
Effective search space: 178066198
Effective search space used: 178066198
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 129 (54.3 bits)