BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4507.p
         (203 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981124|ref|YP_001353546.1| NADH-flavin reductase [Janthino...   236   9e-64

>gi|152981124|ref|YP_001353546.1| NADH-flavin reductase
           [Janthinobacterium sp. Marseille]
          Length = 204

 Score =  236 bits (601), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 115/202 (56%), Positives = 152/202 (75%)

Query: 2   KIALIGASGNVGNRIVDEALRRGHNLIAIARDASKIAQRTGVTAVSADVKDAAALATAIK 61
           KIA+IGA+G  G+++++EALRRGH++ A+AR+ SK+A R GVTA+  DV DAAAL  A+ 
Sbjct: 3   KIAIIGATGRAGSQLLEEALRRGHSVTALARNTSKLAGRAGVTAIDVDVLDAAALEKAVA 62

Query: 62  GADVVISSGRFTAYGVADLLPAVKAAGVKRLAVVGGAGSLEIAPGKALIDTPEFPAEYMP 121
           G D V S+  F+      ++  VK AGVKRL VVGGAGSL +APG  +ID+P+FP  Y  
Sbjct: 63  GHDAVFSAAHFSGIPADAIINPVKKAGVKRLLVVGGAGSLLVAPGVRVIDSPDFPEAYKA 122

Query: 122 EASGGRDFLHALRTETDLEWTYLSPSALFIAGERTGQFRLGKDELLVAADGKSWISYEDF 181
           EA+ G  FL+ L  E +L+WT+LSPSA F+  ERTG+FRLGKD LLV A+G+SWIS++DF
Sbjct: 123 EATAGGVFLNTLLQEKELDWTFLSPSAEFVEEERTGKFRLGKDNLLVDANGRSWISFKDF 182

Query: 182 AVALLDELEQPKHVRARFTVGY 203
           A+A +DELE+P H R RFT+GY
Sbjct: 183 AIAFIDELEKPAHSRQRFTIGY 204


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.318    0.135    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 469,170
Number of extensions: 18588
Number of successful extensions: 68
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 69
Number of HSP's successfully gapped: 1
Length of query: 203
Length of database: 1,221,021
Length adjustment: 79
Effective length of query: 124
Effective length of database: 928,958
Effective search space: 115190792
Effective search space used: 115190792
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 127 (53.5 bits)