BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4451.p
         (401 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980350|ref|YP_001351717.1| nicotinate phosphoribosyltransf...   646   0.0  

>gi|152980350|ref|YP_001351717.1| nicotinate
           phosphoribosyltransferase [Janthinobacterium sp.
           Marseille]
          Length = 414

 Score =  646 bits (1667), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/391 (79%), Positives = 335/391 (85%)

Query: 1   MAPVVRSLLETDLYKFTMWQALLHSHPGAQAEYTFVCRNEPQFPLAELQQEVERELDHLC 60
           M P+VRSLLE DLYKFTMWQALLHSHPGAQAEY FVCRN P +PL+EL+ +VERELDHLC
Sbjct: 18  MNPIVRSLLENDLYKFTMWQALLHSHPGAQAEYAFVCRNTPGYPLSELKADVERELDHLC 77

Query: 61  RLRFQPEELAYLAGLRYMKSDFIDFLALFRFQRKFIQVQTRGEQLCIVARGPQVHVMGFE 120
            L F  +ELAYL  LR+MKSDF+DFL +FRFQRKFI V T G+ L I A GPQVHVMGFE
Sbjct: 78  TLFFAEDELAYLRSLRFMKSDFVDFLTVFRFQRKFISVSTDGDILNIHAAGPQVHVMGFE 137

Query: 121 IFVLYIVNELYFRRLGTPATLVEARRRLQDKLALLHELASQPAGRHPFEFFDFGVRRRYS 180
           IFVLYIVNELYF R    A L E R+RLQ K+A+L E  S+   ++PFEFFDFGVRRR+S
Sbjct: 138 IFVLYIVNELYFHRFDQQAALAEGRKRLQAKIAMLKEFGSEAGRKNPFEFFDFGVRRRFS 197

Query: 181 GAWQEEVVATLAREVPHYFKGSSNVWLAMQYDLVPIGTMAHEYLQSYQAFGVRLRDFQKA 240
            AWQEEVV  LAREVP YFKGSSNV+LA +Y L PIGTMAHEYLQ+YQ+FGVRLRDFQKA
Sbjct: 198 AAWQEEVVVALAREVPQYFKGSSNVYLAKKYGLTPIGTMAHEYLQAYQSFGVRLRDFQKA 257

Query: 241 ALEHWVQEYRGDLGVALTDVVGMDAFLADFDLYFAKLFDGLRHDSGDPFEWGEKALAHYR 300
           ALE WVQEYRGDLG+ALTDVVGMDAFLADFDLYFAKLFDGLRHDSGDP EWGEKALAHY 
Sbjct: 258 ALEDWVQEYRGDLGIALTDVVGMDAFLADFDLYFAKLFDGLRHDSGDPVEWGEKALAHYA 317

Query: 301 KLRLDAHTKRLVFSDGLDLPQAIALYRHFSDRAMTGFGIGTNLSNDTGIPPLNIVMKLSS 360
           KLR+DA TKRLVFSD LDLP A ALYRHF+DR MTGFGIGTNLSNDTGI  LNIVMKL S
Sbjct: 318 KLRVDATTKRLVFSDALDLPTAFALYRHFADRVMTGFGIGTNLSNDTGIATLNIVMKLMS 377

Query: 361 CNGQAVAKLSDSPGKTLCKDETFLAYLRQLF 391
           CNGQ VAKLSDS GKTLC DETFLAYLRQ+F
Sbjct: 378 CNGQPVAKLSDSAGKTLCTDETFLAYLRQVF 408


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.326    0.141    0.432 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 973,226
Number of extensions: 40637
Number of successful extensions: 114
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 114
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 1,221,021
Length adjustment: 85
Effective length of query: 316
Effective length of database: 906,776
Effective search space: 286541216
Effective search space used: 286541216
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 130 (54.7 bits)