BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4440.p
         (173 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981583|ref|YP_001354135.1| phosphinothricin N-acetyltransf...   112   1e-26
gi|152979862|ref|YP_001353673.1| acetyltransferase [Janthinobact...    81   4e-17

>gi|152981583|ref|YP_001354135.1| phosphinothricin
           N-acetyltransferase [Janthinobacterium sp. Marseille]
          Length = 173

 Score =  112 bits (279), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 67/170 (39%), Positives = 94/170 (55%), Gaps = 5/170 (2%)

Query: 3   IRDAIPADIPAITQIFNDAVIHTTAIWSDTLVN-DQNRLDWLAARRQLGYPVLVAVEDEK 61
           IR A   D  AI  I+N  V++T   +    V+ D+  L      +Q  +P LV   D +
Sbjct: 5   IRLATVNDAAAICHIYNHYVLNTVISFEMEAVSADEMALRIEETLQQ--FPWLVYEADGR 62

Query: 62  VLGYASFGDWRPFDGFRHSVEHSVYVHQDHRGQGLGEALMQALIPRARAVGKHVMVAAID 121
           +LGYA    W+    ++HSVE SVY+ QD  G+GLG  L +ALI        H ++  I 
Sbjct: 63  ILGYAYASKWKVRKAYQHSVEGSVYLGQDSGGKGLGTLLYKALIAELAKQSVHAVLGGIV 122

Query: 122 ASNVGSIALHKKLGFAQVGHMPQVGTKFGKWLDLAFLQLTL--DQRTDPD 169
             N GS+ALH+KLGF +V H+PQ+G KF +WLD+ + QL L  D+   P 
Sbjct: 123 LPNPGSVALHEKLGFVKVAHLPQIGKKFDQWLDVGYWQLILQADETLTPS 172


>gi|152979862|ref|YP_001353673.1| acetyltransferase
           [Janthinobacterium sp. Marseille]
          Length = 165

 Score = 80.9 bits (198), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 76/158 (48%)

Query: 1   MQIRDAIPADIPAITQIFNDAVIHTTAIWSDTLVNDQNRLDWLAARRQLGYPVLVAVEDE 60
           +  R A   D+PAI  I+N  +           V   +R  W         P+ V  E  
Sbjct: 3   LPYRLATLDDLPAIVAIYNSTIASRQVTADIEPVTVASRQAWFLEHTAGQRPIWVLEEQG 62

Query: 61  KVLGYASFGDWRPFDGFRHSVEHSVYVHQDHRGQGLGEALMQALIPRARAVGKHVMVAAI 120
           +VLG+ S+ ++     +  +VE S+Y+H+D RG+GLG  L+Q  I  A  +G H +V  I
Sbjct: 63  RVLGWLSYSNFHARAAYAATVELSIYLHEDARGKGLGAYLLQEAIAYAPKLGIHTLVGLI 122

Query: 121 DASNVGSIALHKKLGFAQVGHMPQVGTKFGKWLDLAFL 158
              N  S+ L ++ GF +  +MP+V T  G   DL  +
Sbjct: 123 FGHNTPSLKLFERFGFERWANMPRVATLDGVERDLVIV 160


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.323    0.138    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 406,870
Number of extensions: 16249
Number of successful extensions: 45
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 46
Number of HSP's successfully gapped: 2
Length of query: 173
Length of database: 1,221,021
Length adjustment: 77
Effective length of query: 96
Effective length of database: 936,352
Effective search space: 89889792
Effective search space used: 89889792
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 126 (53.1 bits)