BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4439.p
         (559 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152982334|ref|YP_001353494.1| hypothetical protein mma_1804 [...   294   1e-80
gi|152982326|ref|YP_001354095.1| hypothetical protein mma_2405 [...   153   2e-38

>gi|152982334|ref|YP_001353494.1| hypothetical protein mma_1804
           [Janthinobacterium sp. Marseille]
          Length = 483

 Score =  294 bits (752), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 194/513 (37%), Positives = 265/513 (51%), Gaps = 82/513 (15%)

Query: 12  VSASLLGAVLALSACQKQ------DTPPPTAAAAPAAPTTPPYTPPTAQQLSQMVAPIAL 65
           +S+SL+ ++LAL+   K       D    +AA          Y PP+A Q+ QMVAP+AL
Sbjct: 12  MSSSLICSLLALAVLGKSTESRAADLGFGSAAIMAQNSVGNAYRPPSADQIIQMVAPVAL 71

Query: 66  FPDKLVAQVLAGATYPDQIVAANQWLGQNSALKGDILQAAEEKQPWDVSVKSLTMFPAVL 125
           FPDKL+AQVLA   YP+QI AA+Q L QN +L+   L     +Q WDVSVKSLT FPAVL
Sbjct: 72  FPDKLLAQVLAAGMYPEQITAADQLLKQNPSLQDAALDNVVSRQAWDVSVKSLTAFPAVL 131

Query: 126 SQMASNEDWTRSLGDAFVNDPNDVMNAIQELRLRAQQAGNLKSSSQLRVSSTVRSSESVR 185
           SQ+A N  W+ +LG+ + N PNDVMNA+Q LRLRA Q+G LKSS ++RV+       ++ 
Sbjct: 132 SQLAGNIRWSAALGNTYANAPNDVMNAVQTLRLRALQSGKLKSSREIRVT-------AIP 184

Query: 186 VENAPEPRTVYAGAPVIPPPPQTIVIESSQPDTVYVPTYNPAVVYGPPVPVYPGYVYRPP 245
            +  P          V+ PP Q I I+S+QPD VYVP YNPA+VYG P+PVYP YVYR  
Sbjct: 185 YQPPPPEYADDEAYYVVAPPSQIISIDSAQPDVVYVPEYNPALVYGAPLPVYPNYVYR-- 242

Query: 246 SPVANEVVVGALSFGVGVFVGEAISHHSDWGWGWHDWGMHWGGSG---GGE--WQRPAVV 300
            P    +    +SF +G+ VG A+SHH D  WGWH WGM+WGG G   G +  W+RPAV+
Sbjct: 243 -PGYGSIAGSIISFNIGIIVGSALSHHGD--WGWHPWGMNWGGHGPHYGYQQGWRRPAVI 299

Query: 301 YKNATYVSHSTTIVNRVTNNNVTINNTRVVNNNVNNVSNVNNVNNVNNVNNVNNVRNVEQ 360
           Y N+ Y   S+  +NR     +T       N                             
Sbjct: 300 YNNSVYAPRSSITINRNYGTRITTRPMAPAN----------------------------- 330

Query: 361 RNITNYNQTRIDNRHETAAPAATAMTMPHFTASDTRVGA---------MPER-------R 404
           R   + +  R +  ++ A      MT PHF+  D + GA          PER       R
Sbjct: 331 RAPDDGHGPRPNYGNDHAPRPGQQMTRPHFSPGDMQPGARPPGNAGQHRPERQQGNPRPR 390

Query: 405 EQMGQQKMELANVHAQPATPSTAQREAAHA--------ND-----AHQRQEMEQQAQRE- 450
            + G++        A P T S+  R  +HA        ND      H+  E   +++++ 
Sbjct: 391 SETGERLNSGGRRDAPPGTLSSTGRPPSHAERPPTLRSNDVQRSGVHRPPESRHESRQDF 450

Query: 451 RLQAQQNEQQQARLQAEQRKSQAMKQQEQENAR 483
           R QA Q+ Q + R  A Q + +   QQE+ + R
Sbjct: 451 RQQAPQHMQTERRQSAGQDRPRPAPQQERRDGR 483


>gi|152982326|ref|YP_001354095.1| hypothetical protein mma_2405
           [Janthinobacterium sp. Marseille]
          Length = 418

 Score =  153 bits (387), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/261 (37%), Positives = 137/261 (52%), Gaps = 36/261 (13%)

Query: 17  LGAVLALSACQKQDTPPPTAAAAPAAPTTPPYTPPTAQQLSQMVAPIALFPDKLVAQVLA 76
           L + LAL  C +     P   AA AAP+     P T ++L Q+VAP+AL+PD L++QVL 
Sbjct: 8   LLSALALVLCLQ-----PVLVAAQAAPS-----PLTKEELDQLVAPVALYPDTLLSQVLM 57

Query: 77  GATYPDQIVAANQWLGQNSALKGDILQAAEEKQPWDVSVKSLTMFPAVLSQMASNEDWTR 136
            ATYP  +  A +W   ++ +KGD    A + Q WD SVK+L  FP VL  M    DW +
Sbjct: 58  AATYPADVADAAKWSAAHTNVKGDDAVKAVDAQQWDPSVKALVGFPQVLQMMGQKPDWVQ 117

Query: 137 SLGDAFVNDPNDVMNAIQELRLRAQQAGNLKSSSQLRVSSTVRSSESVRVENAPEPRTVY 196
            LGDAF+    DV+++ Q LR RAQ+AGNLKS+ Q +V   V +S+              
Sbjct: 118 KLGDAFLASSKDVLDSAQRLRARAQKAGNLKSNEQQKV--VVDTSQ-------------- 161

Query: 197 AGAPVIPPPPQTIVIESSQPDTVYVPTYNPAVVYGP--PVPVYPGYVYRPPSPVANEVVV 254
                   P Q I I+ + P  VYVP YNP VVYG        P Y+  PP+      + 
Sbjct: 162 --------PTQVIQIQPANPQVVYVPAYNPTVVYGTWPYPSYPPYYMPPPPAYYPGAALA 213

Query: 255 GALSFGVGVFVGEAISHHSDW 275
             ++FG+GV +  ++    DW
Sbjct: 214 SGIAFGIGVGITASLWSDCDW 234


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.310    0.123    0.355 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 545,986
Number of extensions: 14019
Number of successful extensions: 68
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 64
Number of HSP's successfully gapped: 2
Length of query: 559
Length of database: 1,221,021
Length adjustment: 88
Effective length of query: 471
Effective length of database: 895,685
Effective search space: 421867635
Effective search space used: 421867635
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 132 (55.5 bits)